RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 PLXDC1Q8IUK5 500 aa12.74□□□□□ -0.37
TGFBR3-201ENST00000212355 MCATQ8IVS2 390 aaKnown RBP12.74□□□□□ -0.37
TGFBR3-201ENST00000212355 ZNF740Q8NDX6 193 aa12.74□□□□□ -0.37
TGFBR3-201ENST00000212355 ARL5BQ96KC2 179 aa12.74□□□□□ -0.37
TGFBR3-201ENST00000212355 HYLS1Q96M11 299 aa12.74□□□□□ -0.37
TGFBR3-201ENST00000212355 CTRCQ99895 268 aa12.74□□□□□ -0.37
TGFBR3-201ENST00000212355 WSB2Q9NYS7 404 aaPredicted RBP12.74□□□□□ -0.37
TGFBR3-201ENST00000212355 FBXL2Q9UKC9 423 aa12.74□□□□□ -0.37
TGFBR3-201ENST00000212355 SULT2B1O00204 365 aa12.74□□□□□ -0.37
TGFBR3-201ENST00000212355 HNRNPA2B1P22626 353 aaKnown RBP12.74□□□□□ -0.37
TGFBR3-201ENST00000212355 GABRA2P47869 451 aa12.74□□□□□ -0.37
TGFBR3-201ENST00000212355 FGL1Q08830 312 aa12.74□□□□□ -0.37
TGFBR3-201ENST00000212355 BTN1A1Q13410 526 aa12.74□□□□□ -0.37
TGFBR3-201ENST00000212355 CLMPQ9H6B4 373 aa12.74□□□□□ -0.37
TGFBR3-201ENST00000212355 ADAM18Q9Y3Q7 739 aa12.74□□□□□ -0.37
TGFBR3-201ENST00000212355 SDK1Q7Z5N4 2213 aa12.74□□□□□ -0.37
TGFBR3-201ENST00000212355 CHD4Q14839 1912 aa12.74□□□□□ -0.37
TGFBR3-201ENST00000212355 A6NHS1 94 aa12.74□□□□□ -0.37
TGFBR3-201ENST00000212355 VSTM5A8MXK1 200 aa12.74□□□□□ -0.37
TGFBR3-201ENST00000212355 GAAP10253 952 aa12.74□□□□□ -0.37
TGFBR3-201ENST00000212355 VEGFCP49767 419 aa12.74□□□□□ -0.37
TGFBR3-201ENST00000212355 KEAP1Q14145 624 aa12.74□□□□□ -0.37
TGFBR3-201ENST00000212355 MRPL2Q5T653 305 aaKnown RBP12.74□□□□□ -0.37
TGFBR3-201ENST00000212355 MRPL21Q7Z2W9 205 aaKnown RBP12.74□□□□□ -0.37
TGFBR3-201ENST00000212355 LINC00346Q8IVM7 164 aa12.74□□□□□ -0.37
TGFBR3-201ENST00000212355 LILRA2Q8N149 483 aa12.74□□□□□ -0.37
TGFBR3-201ENST00000212355 SIMC1Q8NDZ2 872 aa12.74□□□□□ -0.37
TGFBR3-201ENST00000212355 STEAP2Q8NFT2 490 aa12.74□□□□□ -0.37
TGFBR3-201ENST00000212355 C3orf49Q96BT1 292 aa12.74□□□□□ -0.37
TGFBR3-201ENST00000212355 SFXN2Q96NB2 322 aa12.74□□□□□ -0.37
TGFBR3-201ENST00000212355 SLC22A12Q96S37 553 aa12.74□□□□□ -0.37
TGFBR3-201ENST00000212355 KCNIP1Q9NZI2 227 aa12.74□□□□□ -0.37
TGFBR3-201ENST00000212355 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.73□□□□□ -0.37
TGFBR3-201ENST00000212355 ZNF705GA8MUZ8 300 aaPredicted RBP12.73□□□□□ -0.37
TGFBR3-201ENST00000212355 CRYZL1O95825 349 aa12.73□□□□□ -0.37
TGFBR3-201ENST00000212355 RPS18P62269 152 aaKnown RBP12.73□□□□□ -0.37
TGFBR3-201ENST00000212355 DSC1Q08554 894 aa12.73□□□□□ -0.37
TGFBR3-201ENST00000212355 FAM111BQ6SJ93 734 aa12.73□□□□□ -0.37
TGFBR3-201ENST00000212355 HAS2Q92819 552 aa12.73□□□□□ -0.37
TGFBR3-201ENST00000212355 MRPL22Q9NWU5 206 aaKnown RBP12.73□□□□□ -0.37
TGFBR3-201ENST00000212355 B4GALT7Q9UBV7 327 aa12.73□□□□□ -0.37
TGFBR3-201ENST00000212355 OSGIN1Q9UJX0 560 aa12.73□□□□□ -0.37
TGFBR3-201ENST00000212355 A0A0B4J2A0 478 aa12.73□□□□□ -0.37
TGFBR3-201ENST00000212355 CENPBD1B2RD01 187 aa12.73□□□□□ -0.37
TGFBR3-201ENST00000212355 B4GALT3O60512 393 aa12.73□□□□□ -0.37
TGFBR3-201ENST00000212355 RFPL3O75679 317 aa12.73□□□□□ -0.37
TGFBR3-201ENST00000212355 RABIFP47224 123 aa12.73□□□□□ -0.37
TGFBR3-201ENST00000212355 IL13RA1P78552 427 aa12.73□□□□□ -0.37
TGFBR3-201ENST00000212355 OR56B2PQ8NGI1 322 aa12.73□□□□□ -0.37
TGFBR3-201ENST00000212355 SMAP2Q8WU79 429 aaPredicted RBP12.73□□□□□ -0.37
TGFBR3-201ENST00000212355 CHPT1Q8WUD6 406 aa12.73□□□□□ -0.37
TGFBR3-201ENST00000212355 RSC1A1Q92681 617 aa12.73□□□□□ -0.37
TGFBR3-201ENST00000212355 NECTIN4Q96NY8 510 aa12.73□□□□□ -0.37
TGFBR3-201ENST00000212355 PARP12Q9H0J9 701 aaKnown RBP12.73□□□□□ -0.37
TGFBR3-201ENST00000212355 PELI2Q9HAT8 420 aa12.73□□□□□ -0.37
TGFBR3-201ENST00000212355 ELOVL3Q9HB03 270 aa12.73□□□□□ -0.37
TGFBR3-201ENST00000212355 SHPKQ9UHJ6 478 aa12.73□□□□□ -0.37
TGFBR3-201ENST00000212355 ACAD8Q9UKU7 415 aa12.73□□□□□ -0.37
TGFBR3-201ENST00000212355 TNK1Q13470 666 aa12.73□□□□□ -0.37
TGFBR3-201ENST00000212355 FAM189A2Q15884 450 aa12.73□□□□□ -0.37
TGFBR3-201ENST00000212355 LSMEM2Q8N112 164 aa12.73□□□□□ -0.37
TGFBR3-201ENST00000212355 MFFQ9GZY8 342 aa12.73□□□□□ -0.37
TGFBR3-201ENST00000212355 BET1O15155 118 aa12.73□□□□□ -0.37
TGFBR3-201ENST00000212355 AIFM1O95831 613 aa12.73□□□□□ -0.37
TGFBR3-201ENST00000212355 PTHP01270 115 aa12.73□□□□□ -0.37
TGFBR3-201ENST00000212355 PTAFRP25105 342 aa12.73□□□□□ -0.37
TGFBR3-201ENST00000212355 CD79BP40259 229 aa12.73□□□□□ -0.37
TGFBR3-201ENST00000212355 EXOSC6Q5RKV6 272 aaKnown RBP12.73□□□□□ -0.37
TGFBR3-201ENST00000212355 DPY19L2P1Q6NXN4 242 aa12.73□□□□□ -0.37
TGFBR3-201ENST00000212355 INSM2Q96T92 566 aaPredicted RBP12.73□□□□□ -0.37
TGFBR3-201ENST00000212355 C1orf196B1AJZ1 125 aa12.73□□□□□ -0.37
TGFBR3-201ENST00000212355 PTTG1O95997 202 aa12.73□□□□□ -0.37
TGFBR3-201ENST00000212355 CLEC2LP0C7M8 214 aa12.73□□□□□ -0.37
TGFBR3-201ENST00000212355 ATXN1LP0C7T5 689 aaKnown RBP12.73□□□□□ -0.37
TGFBR3-201ENST00000212355 TGFBR1P36897 503 aa12.73□□□□□ -0.37
TGFBR3-201ENST00000212355 VEGFBP49765 207 aa12.73□□□□□ -0.37
TGFBR3-201ENST00000212355 PSPHP78330 225 aa12.73□□□□□ -0.37
TGFBR3-201ENST00000212355 POU3F1Q03052 451 aaPredicted RBP12.73□□□□□ -0.37
TGFBR3-201ENST00000212355 LTBQ06643 244 aa12.73□□□□□ -0.37
TGFBR3-201ENST00000212355 TATDN3Q17R31 274 aa12.73□□□□□ -0.37
TGFBR3-201ENST00000212355 ZNF585AQ6P3V2 769 aa12.73□□□□□ -0.37
TGFBR3-201ENST00000212355 PRSS45Q7RTY3 260 aa12.73□□□□□ -0.37
TGFBR3-201ENST00000212355 RHBDD1Q8TEB9 315 aa12.73□□□□□ -0.37
TGFBR3-201ENST00000212355 INTS14Q96SY0 518 aa12.73□□□□□ -0.37
TGFBR3-201ENST00000212355 MYNNQ9NPC7 610 aa12.73□□□□□ -0.37
TGFBR3-201ENST00000212355 CNOT11Q9UKZ1 510 aaKnown RBP12.73□□□□□ -0.37
TGFBR3-201ENST00000212355 SLC6A5Q9Y345 797 aa12.73□□□□□ -0.37
TGFBR3-201ENST00000212355 AP1G1O43747 822 aa12.72□□□□□ -0.37
TGFBR3-201ENST00000212355 CAMK2DQ13557 499 aa12.72□□□□□ -0.37
TGFBR3-201ENST00000212355 RAB33AQ14088 237 aa12.72□□□□□ -0.37
TGFBR3-201ENST00000212355 GPR19Q15760 415 aa12.72□□□□□ -0.37
TGFBR3-201ENST00000212355 ESPNLQ6ZVH7 1005 aa12.72□□□□□ -0.37
TGFBR3-201ENST00000212355 FRMD1Q8N878 549 aa12.72□□□□□ -0.37
TGFBR3-201ENST00000212355 SFXN5Q8TD22 340 aa12.72□□□□□ -0.37
TGFBR3-201ENST00000212355 TMEM255BQ8WV15 326 aa12.72□□□□□ -0.37
TGFBR3-201ENST00000212355 LRIG1Q96JA1 1093 aa12.72□□□□□ -0.37
TGFBR3-201ENST00000212355 TAF1P21675 1872 aa12.72□□□□□ -0.37
TGFBR3-201ENST00000212355 PRKYO43930 277 aa12.72□□□□□ -0.37
TGFBR3-201ENST00000212355 AKAIN1P0CW23 69 aa12.72□□□□□ -0.37
TGFBR3-201ENST00000212355 CTSAP10619 480 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms