RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 CNRIP1Q96F85 164 aaPredicted RBP11.2□□□□□ -0.62
CHPF2-201ENST00000035307 DUS3LQ96G46 650 aaKnown RBP11.2□□□□□ -0.62
CHPF2-201ENST00000035307 RBM38Q9H0Z9 239 aaKnown RBP11.2□□□□□ -0.62
CHPF2-201ENST00000035307 ARRDC1-AS1Q9H2J1 176 aa11.2□□□□□ -0.62
CHPF2-201ENST00000035307 CKLFQ9UBR5 152 aa11.2□□□□□ -0.62
CHPF2-201ENST00000035307 FARSAQ9Y285 508 aaKnown RBP11.2□□□□□ -0.62
CHPF2-201ENST00000035307 GRIP1Q9Y3R0 1128 aa11.2□□□□□ -0.62
CHPF2-201ENST00000035307 HEATR5BQ9P2D3 2071 aa11.2□□□□□ -0.62
CHPF2-201ENST00000035307 ANKRD61A6NGH8 418 aa11.2□□□□□ -0.62
CHPF2-201ENST00000035307 FGF17O60258 216 aa11.2□□□□□ -0.62
CHPF2-201ENST00000035307 OTX2P32243 289 aa11.2□□□□□ -0.62
CHPF2-201ENST00000035307 RPS19P39019 145 aaKnown RBP11.2□□□□□ -0.62
CHPF2-201ENST00000035307 RUNX2Q13950 521 aa11.2□□□□□ -0.62
CHPF2-201ENST00000035307 OR1Q1Q15612 314 aa11.2□□□□□ -0.62
CHPF2-201ENST00000035307 BCL2L15Q5TBC7 163 aa11.2□□□□□ -0.62
CHPF2-201ENST00000035307 PAMR1Q6UXH9 720 aa11.2□□□□□ -0.62
CHPF2-201ENST00000035307 NUP54Q7Z3B4 507 aa11.2□□□□□ -0.62
CHPF2-201ENST00000035307 KRT77Q7Z794 578 aa11.2□□□□□ -0.62
CHPF2-201ENST00000035307 CCDC74AQ96AQ1 378 aa11.2□□□□□ -0.62
CHPF2-201ENST00000035307 ELP4Q96EB1 424 aa11.2□□□□□ -0.62
CHPF2-201ENST00000035307 SGTBQ96EQ0 304 aa11.2□□□□□ -0.62
CHPF2-201ENST00000035307 C4orf36Q96KX1 117 aa11.2□□□□□ -0.62
CHPF2-201ENST00000035307 SEMA4GQ9NTN9 838 aa11.2□□□□□ -0.62
CHPF2-201ENST00000035307 TBCCD1Q9NVR7 557 aa11.2□□□□□ -0.62
CHPF2-201ENST00000035307 GXYLT2A0PJZ3 443 aa11.19□□□□□ -0.62
CHPF2-201ENST00000035307 OR2A25A4D2G3 310 aa11.19□□□□□ -0.62
CHPF2-201ENST00000035307 LILRB5O75023 590 aa11.19□□□□□ -0.62
CHPF2-201ENST00000035307 SLC6A9P48067 706 aa11.19□□□□□ -0.62
CHPF2-201ENST00000035307 ZNF33BQ06732 778 aa11.19□□□□□ -0.62
CHPF2-201ENST00000035307 CHAF1BQ13112 559 aa11.19□□□□□ -0.62
CHPF2-201ENST00000035307 GRM7Q14831 915 aa11.19□□□□□ -0.62
CHPF2-201ENST00000035307 LRRC37A5PQ49AS3 106 aa11.19□□□□□ -0.62
CHPF2-201ENST00000035307 XAF1Q6GPH4 301 aa11.19□□□□□ -0.62
CHPF2-201ENST00000035307 FBXO42Q6P3S6 717 aa11.19□□□□□ -0.62
CHPF2-201ENST00000035307 SLC29A4Q7RTT9 530 aa11.19□□□□□ -0.62
CHPF2-201ENST00000035307 ADGRF3Q8IZF5 1079 aa11.19□□□□□ -0.62
CHPF2-201ENST00000035307 PPP1R14AQ96A00 147 aa11.19□□□□□ -0.62
CHPF2-201ENST00000035307 HS6ST2Q96MM7 605 aa11.19□□□□□ -0.62
CHPF2-201ENST00000035307 TNFRSF13CQ96RJ3 184 aa11.19□□□□□ -0.62
CHPF2-201ENST00000035307 ELF4Q99607 663 aaPredicted RBP11.19□□□□□ -0.62
CHPF2-201ENST00000035307 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.19□□□□□ -0.62
CHPF2-201ENST00000035307 AKAP6Q13023 2319 aa11.19□□□□□ -0.62
CHPF2-201ENST00000035307 ANAPC1Q9H1A4 1944 aa11.19□□□□□ -0.62
CHPF2-201ENST00000035307 IGHV5-51A0A0C4DH38 117 aa11.19□□□□□ -0.62
CHPF2-201ENST00000035307 FMO6PO60774 539 aa11.19□□□□□ -0.62
CHPF2-201ENST00000035307 CSO75390 466 aaKnown RBP11.19□□□□□ -0.62
CHPF2-201ENST00000035307 PAHP00439 452 aa11.19□□□□□ -0.62
CHPF2-201ENST00000035307 KLK3P07288 261 aaPredicted RBP11.19□□□□□ -0.62
CHPF2-201ENST00000035307 KIAA1024LP59773 190 aa11.19□□□□□ -0.62
CHPF2-201ENST00000035307 CRMP1Q14194 572 aa11.19□□□□□ -0.62
CHPF2-201ENST00000035307 ZNF527Q8NB42 609 aa11.19□□□□□ -0.62
CHPF2-201ENST00000035307 OR51Q1Q8NH59 317 aa11.19□□□□□ -0.62
CHPF2-201ENST00000035307 PFN4Q8NHR9 129 aa11.19□□□□□ -0.62
CHPF2-201ENST00000035307 PINK1Q9BXM7 581 aa11.19□□□□□ -0.62
CHPF2-201ENST00000035307 SYNPO2LQ9H987 977 aa11.19□□□□□ -0.62
CHPF2-201ENST00000035307 PISDQ9UG56 409 aa11.19□□□□□ -0.62
CHPF2-201ENST00000035307 FBXL3Q9UKT7 428 aa11.19□□□□□ -0.62
CHPF2-201ENST00000035307 CCL27Q9Y4X3 112 aa11.19□□□□□ -0.62
CHPF2-201ENST00000035307 HS3ST3A1Q9Y663 406 aa11.19□□□□□ -0.62
CHPF2-201ENST00000035307 GPR89AB7ZAQ6 455 aa11.19□□□□□ -0.62
CHPF2-201ENST00000035307 POLR1CO15160 346 aaPredicted RBP11.19□□□□□ -0.62
CHPF2-201ENST00000035307 GPR89BP0CG08 455 aa11.19□□□□□ -0.62
CHPF2-201ENST00000035307 BSGP35613 385 aa11.19□□□□□ -0.62
CHPF2-201ENST00000035307 EMP3P54852 163 aa11.19□□□□□ -0.62
CHPF2-201ENST00000035307 PLCXD2Q0VAA5 305 aa11.19□□□□□ -0.62
CHPF2-201ENST00000035307 BTBD16Q32M84 506 aa11.19□□□□□ -0.62
CHPF2-201ENST00000035307 SYT6Q5T7P8 510 aaPredicted RBP11.19□□□□□ -0.62
CHPF2-201ENST00000035307 TMEM151BQ8IW70 566 aa11.19□□□□□ -0.62
CHPF2-201ENST00000035307 BBS1Q8NFJ9 593 aa11.19□□□□□ -0.62
CHPF2-201ENST00000035307 TSLPQ969D9 159 aa11.19□□□□□ -0.62
CHPF2-201ENST00000035307 DUSP21Q9H596 190 aa11.19□□□□□ -0.62
CHPF2-201ENST00000035307 COQ3Q9NZJ6 369 aa11.19□□□□□ -0.62
CHPF2-201ENST00000035307 ZNF69Q9UC07 566 aa11.19□□□□□ -0.62
CHPF2-201ENST00000035307 ZNF443Q9Y2A4 671 aaPredicted RBP11.19□□□□□ -0.62
CHPF2-201ENST00000035307 HTR1AP08908 422 aa11.18□□□□□ -0.62
CHPF2-201ENST00000035307 PRKCAP17252 672 aa11.18□□□□□ -0.62
CHPF2-201ENST00000035307 F8A1P23610 371 aa11.18□□□□□ -0.62
CHPF2-201ENST00000035307 SOX18P35713 384 aa11.18□□□□□ -0.62
CHPF2-201ENST00000035307 ZNF181Q2M3W8 571 aa11.18□□□□□ -0.62
CHPF2-201ENST00000035307 C4orf46Q504U0 113 aa11.18□□□□□ -0.62
CHPF2-201ENST00000035307 HSD17B12Q53GQ0 312 aa11.18□□□□□ -0.62
CHPF2-201ENST00000035307 OLFML2AQ68BL7 652 aa11.18□□□□□ -0.62
CHPF2-201ENST00000035307 GUSBP11Q6P575 273 aa11.18□□□□□ -0.62
CHPF2-201ENST00000035307 FAM199XQ6PEV8 388 aaPredicted RBP11.18□□□□□ -0.62
CHPF2-201ENST00000035307 KLHL24Q6TFL4 600 aa11.18□□□□□ -0.62
CHPF2-201ENST00000035307 C16orf47Q6ZP98 133 aaPredicted RBP11.18□□□□□ -0.62
CHPF2-201ENST00000035307 FOXRED2Q8IWF2 684 aa11.18□□□□□ -0.62
CHPF2-201ENST00000035307 CDRT4Q8N9R6 151 aa11.18□□□□□ -0.62
CHPF2-201ENST00000035307 CNOT9Q92600 299 aaKnown RBP11.18□□□□□ -0.62
CHPF2-201ENST00000035307 LMF1Q96S06 567 aa11.18□□□□□ -0.62
CHPF2-201ENST00000035307 PLEKHA1Q9HB21 404 aa11.18□□□□□ -0.62
CHPF2-201ENST00000035307 ASIC5Q9NY37 505 aa11.18□□□□□ -0.62
CHPF2-201ENST00000035307 RARRES3Q9UL19 164 aa11.18□□□□□ -0.62
CHPF2-201ENST00000035307 RASD1Q9Y272 281 aa11.18□□□□□ -0.62
CHPF2-201ENST00000035307 HCRTR1O43613 425 aa11.18□□□□□ -0.62
CHPF2-201ENST00000035307 ARL6IP5O75915 188 aa11.18□□□□□ -0.62
CHPF2-201ENST00000035307 CD2P06729 351 aa11.18□□□□□ -0.62
CHPF2-201ENST00000035307 TMEM44Q2T9K0 475 aa11.18□□□□□ -0.62
CHPF2-201ENST00000035307 PGGHGQ32M88 737 aa11.18□□□□□ -0.62
CHPF2-201ENST00000035307 TMEM53Q6P2H8 277 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms