RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Slc25a34A2ADF7 318 aa15.3■□□□□ 0.04
Shh-201ENSMUST00000002708 Gm11127A7VMS2 374 aa15.3■□□□□ 0.04
Shh-201ENSMUST00000002708 Esp22A8R0V4 111 aa15.3■□□□□ 0.04
Shh-201ENSMUST00000002708 Olfr653E9PVA0 317 aa15.3■□□□□ 0.04
Shh-201ENSMUST00000002708 Gm3327F7C9A1 213 aa15.3■□□□□ 0.04
Shh-201ENSMUST00000002708 RrhO35214 337 aa15.3■□□□□ 0.04
Shh-201ENSMUST00000002708 Fgf9P54130 208 aa15.3■□□□□ 0.04
Shh-201ENSMUST00000002708 Bglap3P54615 95 aa15.3■□□□□ 0.04
Shh-201ENSMUST00000002708 Eif4eP63073 217 aaKnown RBP15.3■□□□□ 0.04
Shh-201ENSMUST00000002708 Prss55Q14BX2 321 aa15.3■□□□□ 0.04
Shh-201ENSMUST00000002708 Cd47Q61735 303 aa15.3■□□□□ 0.04
Shh-201ENSMUST00000002708 Prg2Q61878 223 aa15.3■□□□□ 0.04
Shh-201ENSMUST00000002708 Pea15Q62048 130 aa15.3■□□□□ 0.04
Shh-201ENSMUST00000002708 ManeaQ6NXH2 462 aa15.3■□□□□ 0.04
Shh-201ENSMUST00000002708 Eif4e2Q8BMB3 245 aaKnown RBP15.3■□□□□ 0.04
Shh-201ENSMUST00000002708 MdficQ8BX65 247 aa15.3■□□□□ 0.04
Shh-201ENSMUST00000002708 BollQ924M5 281 aa15.3■□□□□ 0.04
Shh-201ENSMUST00000002708 Izumo2Q9DA16 220 aa15.3■□□□□ 0.04
Shh-201ENSMUST00000002708 Spaca1Q9DA48 305 aa15.3■□□□□ 0.04
Shh-201ENSMUST00000002708 Olfr1076A2AK60 313 aa15.3■□□□□ 0.04
Shh-201ENSMUST00000002708 Btbd16E9Q173 522 aa15.3■□□□□ 0.04
Shh-201ENSMUST00000002708 H2-Q7P14429 334 aa15.3■□□□□ 0.04
Shh-201ENSMUST00000002708 H2-Q9P14431 200 aa15.3■□□□□ 0.04
Shh-201ENSMUST00000002708 Tra2bP62996 288 aaKnown RBP15.3■□□□□ 0.04
Shh-201ENSMUST00000002708 Vat1Q62465 406 aa15.3■□□□□ 0.04
Shh-201ENSMUST00000002708 Dtx4Q6PDK8 616 aa15.3■□□□□ 0.04
Shh-201ENSMUST00000002708 Pik3ip1Q7TMJ8 264 aa15.3■□□□□ 0.04
Shh-201ENSMUST00000002708 Spag1Q80ZX8 901 aa15.3■□□□□ 0.04
Shh-201ENSMUST00000002708 Rdh1Q8CGV4 317 aa15.3■□□□□ 0.04
Shh-201ENSMUST00000002708 Cmss1Q9CZT6 276 aaKnown RBP15.3■□□□□ 0.04
Shh-201ENSMUST00000002708 IqchQ9D2K4 1071 aa15.3■□□□□ 0.04
Shh-201ENSMUST00000002708 Chp2Q9D869 196 aa15.3■□□□□ 0.04
Shh-201ENSMUST00000002708 Deaf1Q9Z1T5 566 aa15.3■□□□□ 0.04
Shh-201ENSMUST00000002708 Mpeg1A1L314 713 aa15.3■□□□□ 0.04
Shh-201ENSMUST00000002708 Gm7951E9Q0A2 213 aa15.3■□□□□ 0.04
Shh-201ENSMUST00000002708 Gm6482F6YHC1 213 aa15.3■□□□□ 0.04
Shh-201ENSMUST00000002708 Gm17124F6ZIG1 213 aa15.3■□□□□ 0.04
Shh-201ENSMUST00000002708 Vmn2r52L7N2B2 852 aa15.3■□□□□ 0.04
Shh-201ENSMUST00000002708 Lancl1O89112 399 aa15.3■□□□□ 0.04
Shh-201ENSMUST00000002708 CtslP06797 334 aa15.3■□□□□ 0.04
Shh-201ENSMUST00000002708 Ucp2P70406 309 aa15.3■□□□□ 0.04
Shh-201ENSMUST00000002708 Tfb2mQ3TL26 396 aaKnown RBP15.3■□□□□ 0.04
Shh-201ENSMUST00000002708 Gpr75Q6X632 540 aa15.3■□□□□ 0.04
Shh-201ENSMUST00000002708 Cep68Q8C0D9 733 aa15.3■□□□□ 0.04
Shh-201ENSMUST00000002708 Sphk1Q8CI15 382 aa15.3■□□□□ 0.04
Shh-201ENSMUST00000002708 Odf4Q8VI88 290 aa15.3■□□□□ 0.04
Shh-201ENSMUST00000002708 Slc41a3Q921R8 488 aa15.3■□□□□ 0.04
Shh-201ENSMUST00000002708 Tspan31Q9CQ88 210 aa15.3■□□□□ 0.04
Shh-201ENSMUST00000002708 Olfr937Q9EQB4 311 aa15.3■□□□□ 0.04
Shh-201ENSMUST00000002708 Herpud2Q9JJC9 404 aa15.3■□□□□ 0.04
Shh-201ENSMUST00000002708 Exo1Q9QZ11 837 aa15.3■□□□□ 0.04
Shh-201ENSMUST00000002708 Serpina3jD3Z451 420 aa15.29■□□□□ 0.04
Shh-201ENSMUST00000002708 Gpr31F8VQN3 319 aa15.29■□□□□ 0.04
Shh-201ENSMUST00000002708 Vmn2r109K7N747 858 aa15.29■□□□□ 0.04
Shh-201ENSMUST00000002708 AurkcO88445 282 aa15.29■□□□□ 0.04
Shh-201ENSMUST00000002708 P01629 112 aa15.29■□□□□ 0.04
Shh-201ENSMUST00000002708 Klhl21Q3U410 597 aa15.29■□□□□ 0.04
Shh-201ENSMUST00000002708 Gm45902Q3UDN3 361 aa15.29■□□□□ 0.04
Shh-201ENSMUST00000002708 Slc47a2Q3V050 573 aa15.29■□□□□ 0.04
Shh-201ENSMUST00000002708 Sema3gQ4LFA9 780 aa15.29■□□□□ 0.04
Shh-201ENSMUST00000002708 Surf4Q64310 269 aa15.29■□□□□ 0.04
Shh-201ENSMUST00000002708 BocQ6AZB0 1110 aa15.29■□□□□ 0.04
Shh-201ENSMUST00000002708 Olfr857Q7TRF7 309 aa15.29■□□□□ 0.04
Shh-201ENSMUST00000002708 Olfr70Q80ZX9 316 aa15.29■□□□□ 0.04
Shh-201ENSMUST00000002708 Cox15Q8BJ03 413 aa15.29■□□□□ 0.04
Shh-201ENSMUST00000002708 Olfr474Q8VFC9 310 aa15.29■□□□□ 0.04
Shh-201ENSMUST00000002708 Olfr935Q8VG16 308 aa15.29■□□□□ 0.04
Shh-201ENSMUST00000002708 Olfr61Q8VGM2 311 aa15.29■□□□□ 0.04
Shh-201ENSMUST00000002708 Lamtor1Q9CQ22 161 aa15.29■□□□□ 0.04
Shh-201ENSMUST00000002708 Tmem35aQ9D328 167 aa15.29■□□□□ 0.04
Shh-201ENSMUST00000002708 Vps13aQ5H8C4 3166 aa15.29■□□□□ 0.04
Shh-201ENSMUST00000002708 Gm3854A0A1B0GSS6 495 aa15.29■□□□□ 0.04
Shh-201ENSMUST00000002708 SrsxB2RZI1 361 aa15.29■□□□□ 0.04
Shh-201ENSMUST00000002708 Mthfd2lD3YZG8 338 aa15.29■□□□□ 0.04
Shh-201ENSMUST00000002708 Cd209fD3Z1H5 274 aa15.29■□□□□ 0.04
Shh-201ENSMUST00000002708 Olfr519K7N645 319 aa15.29■□□□□ 0.04
Shh-201ENSMUST00000002708 EmdO08579 259 aaKnown RBP15.29■□□□□ 0.04
Shh-201ENSMUST00000002708 Tbx6P70327 436 aa15.29■□□□□ 0.04
Shh-201ENSMUST00000002708 AmbpQ07456 349 aa15.29■□□□□ 0.04
Shh-201ENSMUST00000002708 SctQ08535 133 aa15.29■□□□□ 0.04
Shh-201ENSMUST00000002708 Dhrs11Q3U0B3 260 aa15.29■□□□□ 0.04
Shh-201ENSMUST00000002708 Fgl1Q71KU9 314 aa15.29■□□□□ 0.04
Shh-201ENSMUST00000002708 Olfr298Q7TS06 332 aa15.29■□□□□ 0.04
Shh-201ENSMUST00000002708 Olfr1176Q8VG40 315 aa15.29■□□□□ 0.04
Shh-201ENSMUST00000002708 Mrpl37Q921S7 423 aaKnown RBP15.29■□□□□ 0.04
Shh-201ENSMUST00000002708 LipfQ9CPP7 395 aa15.29■□□□□ 0.04
Shh-201ENSMUST00000002708 Snapc3Q9D2C9 407 aa15.29■□□□□ 0.04
Shh-201ENSMUST00000002708 Rsph9Q9D9V4 276 aa15.29■□□□□ 0.04
Shh-201ENSMUST00000002708 CalyQ9DCA7 226 aa15.29■□□□□ 0.04
Shh-201ENSMUST00000002708 NcdnQ9Z0E0 729 aa15.29■□□□□ 0.04
Shh-201ENSMUST00000002708 I0C0044D17RikA6PWL3 169 aa15.28■□□□□ 0.04
Shh-201ENSMUST00000002708 9330182O14RikJ3QNB2 140 aa15.28■□□□□ 0.04
Shh-201ENSMUST00000002708 H2al1oL7MU04 110 aa15.28■□□□□ 0.04
Shh-201ENSMUST00000002708 P03987 398 aa15.28■□□□□ 0.04
Shh-201ENSMUST00000002708 ArafP04627 604 aa15.28■□□□□ 0.04
Shh-201ENSMUST00000002708 H2-T3P14432 384 aa15.28■□□□□ 0.04
Shh-201ENSMUST00000002708 Grxcr1Q50H32 290 aa15.28■□□□□ 0.04
Shh-201ENSMUST00000002708 Mfsd4aQ6PDC8 510 aa15.28■□□□□ 0.04
Shh-201ENSMUST00000002708 Mrpl38Q8K2M0 380 aa15.28■□□□□ 0.04
Shh-201ENSMUST00000002708 Uckl1Q91YL3 548 aa15.28■□□□□ 0.04
Retrieved 100 of 22,080 RNA–protein pairs in 24.6 ms