RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 CASC3O15234 703 aaKnown RBP12.79□□□□□ -0.36
SCARB2-227ENST00000640957 CXCL14O95715 111 aa12.79□□□□□ -0.36
SCARB2-227ENST00000640957 GKN3PP0CG01 181 aa12.79□□□□□ -0.36
SCARB2-227ENST00000640957 TNFRSF17Q02223 184 aa12.79□□□□□ -0.36
SCARB2-227ENST00000640957 ARSIQ5FYB1 569 aa12.79□□□□□ -0.36
SCARB2-227ENST00000640957 CDC73Q6P1J9 531 aa12.79□□□□□ -0.36
SCARB2-227ENST00000640957 FCRLAQ7L513 359 aa12.79□□□□□ -0.36
SCARB2-227ENST00000640957 FAM219AQ8IW50 185 aa12.79□□□□□ -0.36
SCARB2-227ENST00000640957 HGDQ93099 445 aa12.79□□□□□ -0.36
SCARB2-227ENST00000640957 RAD51AP1Q96B01 352 aa12.79□□□□□ -0.36
SCARB2-227ENST00000640957 ZNF649Q9BS31 505 aa12.79□□□□□ -0.36
SCARB2-227ENST00000640957 ZNF230Q9UIE0 474 aaPredicted RBP12.79□□□□□ -0.36
SCARB2-227ENST00000640957 LOC100509620A0A075B734 347 aa12.79□□□□□ -0.36
SCARB2-227ENST00000640957 TMPRSS11DO60235 418 aa12.79□□□□□ -0.36
SCARB2-227ENST00000640957 H2BFSP57053 126 aa12.79□□□□□ -0.36
SCARB2-227ENST00000640957 NOGQ13253 232 aa12.79□□□□□ -0.36
SCARB2-227ENST00000640957 ZNF311Q5JNZ3 666 aa12.79□□□□□ -0.36
SCARB2-227ENST00000640957 C1orf94Q6P1W5 598 aa12.79□□□□□ -0.36
SCARB2-227ENST00000640957 SEZ6L2Q6UXD5 910 aa12.79□□□□□ -0.36
SCARB2-227ENST00000640957 PDZD9Q8IXQ8 264 aa12.79□□□□□ -0.36
SCARB2-227ENST00000640957 DNAAF1Q8NEP3 725 aa12.79□□□□□ -0.36
SCARB2-227ENST00000640957 OR10K1Q8NGX5 313 aa12.79□□□□□ -0.36
SCARB2-227ENST00000640957 GOT1L1Q8NHS2 421 aaPredicted RBP12.79□□□□□ -0.36
SCARB2-227ENST00000640957 DVL3Q92997 716 aaPredicted RBP12.79□□□□□ -0.36
SCARB2-227ENST00000640957 CPNE2Q96FN4 548 aaPredicted RBP12.79□□□□□ -0.36
SCARB2-227ENST00000640957 VN1R3Q9BXE9 311 aa12.79□□□□□ -0.36
SCARB2-227ENST00000640957 POT1Q9NUX5 634 aa12.79□□□□□ -0.36
SCARB2-227ENST00000640957 ACTR10Q9NZ32 417 aa12.79□□□□□ -0.36
SCARB2-227ENST00000640957 NDOR1Q9UHB4 597 aa12.79□□□□□ -0.36
SCARB2-227ENST00000640957 NPIPA5A0A0B4J1W7 369 aa12.78□□□□□ -0.36
SCARB2-227ENST00000640957 A0A1W2PRQ8 180 aa12.78□□□□□ -0.36
SCARB2-227ENST00000640957 PLSCR5A0PG75 271 aa12.78□□□□□ -0.36
SCARB2-227ENST00000640957 TMEM200CA6NKL6 621 aa12.78□□□□□ -0.36
SCARB2-227ENST00000640957 NPIPA7E9PJI5 369 aa12.78□□□□□ -0.36
SCARB2-227ENST00000640957 H7C2Y5 167 aa12.78□□□□□ -0.36
SCARB2-227ENST00000640957 SURF4O15260 269 aa12.78□□□□□ -0.36
SCARB2-227ENST00000640957 PTP4A3O75365 173 aa12.78□□□□□ -0.36
SCARB2-227ENST00000640957 HMGN2P05204 90 aaKnown RBP12.78□□□□□ -0.36
SCARB2-227ENST00000640957 NPIPA8P0DM63 369 aa12.78□□□□□ -0.36
SCARB2-227ENST00000640957 TMIGD3P0DMS9 266 aaPredicted RBP12.78□□□□□ -0.36
SCARB2-227ENST00000640957 RAB3AP20336 220 aa12.78□□□□□ -0.36
SCARB2-227ENST00000640957 PSMB1P20618 241 aaKnown RBP12.78□□□□□ -0.36
SCARB2-227ENST00000640957 S100A11P31949 105 aa12.78□□□□□ -0.36
SCARB2-227ENST00000640957 MPIP34949 423 aa12.78□□□□□ -0.36
SCARB2-227ENST00000640957 CCR9P51686 369 aa12.78□□□□□ -0.36
SCARB2-227ENST00000640957 NCBP2P52298 156 aaKnown RBP eCLIP12.78□□□□□ -0.36
SCARB2-227ENST00000640957 NTHL1P78549 312 aa12.78□□□□□ -0.36
SCARB2-227ENST00000640957 GPNMBQ14956 572 aa12.78□□□□□ -0.36
SCARB2-227ENST00000640957 PDSS1Q5T2R2 415 aa12.78□□□□□ -0.36
SCARB2-227ENST00000640957 AADACL4Q5VUY2 407 aa12.78□□□□□ -0.36
SCARB2-227ENST00000640957 LYPLAL1Q5VWZ2 237 aa12.78□□□□□ -0.36
SCARB2-227ENST00000640957 OR7E24Q6IFN5 339 aa12.78□□□□□ -0.36
SCARB2-227ENST00000640957 SLC8B1Q6J4K2 584 aa12.78□□□□□ -0.36
SCARB2-227ENST00000640957 BPIFCQ8NFQ6 507 aa12.78□□□□□ -0.36
SCARB2-227ENST00000640957 HAVCR2Q8TDQ0 301 aa12.78□□□□□ -0.36
SCARB2-227ENST00000640957 SLC35G5Q96KT7 338 aa12.78□□□□□ -0.36
SCARB2-227ENST00000640957 IFT22Q9H7X7 185 aa12.78□□□□□ -0.36
SCARB2-227ENST00000640957 SLC39A1Q9NY26 324 aa12.78□□□□□ -0.36
SCARB2-227ENST00000640957 PRELID3BQ9Y3B1 194 aa12.78□□□□□ -0.36
SCARB2-227ENST00000640957 BACE2Q9Y5Z0 518 aa12.78□□□□□ -0.36
SCARB2-227ENST00000640957 A0A0G2JK05 382 aa12.78□□□□□ -0.36
SCARB2-227ENST00000640957 CDHR4A6H8M9 788 aa12.78□□□□□ -0.36
SCARB2-227ENST00000640957 C1GALT1C1LP0DN25 315 aa12.78□□□□□ -0.36
SCARB2-227ENST00000640957 HLA-FP30511 346 aa12.78□□□□□ -0.36
SCARB2-227ENST00000640957 IRF5Q13568 498 aa12.78□□□□□ -0.36
SCARB2-227ENST00000640957 FAM209BQ5JX69 171 aa12.78□□□□□ -0.36
SCARB2-227ENST00000640957 BRF2Q9HAW0 419 aa12.78□□□□□ -0.36
SCARB2-227ENST00000640957 SPG21Q9NZD8 308 aa12.78□□□□□ -0.36
SCARB2-227ENST00000640957 TAC3Q9UHF0 121 aa12.78□□□□□ -0.36
SCARB2-227ENST00000640957 HEATR5BQ9P2D3 2071 aa12.78□□□□□ -0.36
SCARB2-227ENST00000640957 KRBOX1C9JBD0 128 aa12.77□□□□□ -0.36
SCARB2-227ENST00000640957 CAPZA2P47755 286 aa12.77□□□□□ -0.36
SCARB2-227ENST00000640957 ANXA11P50995 505 aaKnown RBP12.77□□□□□ -0.36
SCARB2-227ENST00000640957 CCNJQ5T5M9 372 aa12.77□□□□□ -0.36
SCARB2-227ENST00000640957 PLPP4Q5VZY2 271 aa12.77□□□□□ -0.36
SCARB2-227ENST00000640957 LHX8Q68G74 356 aa12.77□□□□□ -0.36
SCARB2-227ENST00000640957 GSG1LQ6UXU4 331 aa12.77□□□□□ -0.36
SCARB2-227ENST00000640957 TMEM185AQ8NFB2 350 aa12.77□□□□□ -0.36
SCARB2-227ENST00000640957 FGF11Q92914 225 aa12.77□□□□□ -0.36
SCARB2-227ENST00000640957 CHFRQ96EP1 664 aa12.77□□□□□ -0.36
SCARB2-227ENST00000640957 ZNF75AQ96N20 296 aa12.77□□□□□ -0.36
SCARB2-227ENST00000640957 SIRT3Q9NTG7 399 aaPredicted RBP12.77□□□□□ -0.36
SCARB2-227ENST00000640957 PHF11Q9UIL8 331 aa12.77□□□□□ -0.36
SCARB2-227ENST00000640957 PLCL2Q9UPR0 1127 aa12.77□□□□□ -0.36
SCARB2-227ENST00000640957 OR51B4Q9Y5P0 310 aa12.77□□□□□ -0.36
SCARB2-227ENST00000640957 WNT6Q9Y6F9 365 aa12.77□□□□□ -0.36
SCARB2-227ENST00000640957 EYSQ5T1H1 3165 aa12.77□□□□□ -0.36
SCARB2-227ENST00000640957 TRAV27A0A087WT01 109 aa12.77□□□□□ -0.37
SCARB2-227ENST00000640957 IMPA2O14732 288 aa12.77□□□□□ -0.37
SCARB2-227ENST00000640957 C8AP07357 584 aa12.77□□□□□ -0.37
SCARB2-227ENST00000640957 CSF2RAP15509 400 aa12.77□□□□□ -0.37
SCARB2-227ENST00000640957 PPP2R1BP30154 601 aa12.77□□□□□ -0.37
SCARB2-227ENST00000640957 SOX2P48431 317 aa12.77□□□□□ -0.37
SCARB2-227ENST00000640957 EFNB1P98172 346 aa12.77□□□□□ -0.37
SCARB2-227ENST00000640957 PLA2G7Q13093 441 aa12.77□□□□□ -0.37
SCARB2-227ENST00000640957 FAM26DQ5JW98 314 aa12.77□□□□□ -0.37
SCARB2-227ENST00000640957 GAREM2Q75VX8 874 aa12.77□□□□□ -0.37
SCARB2-227ENST00000640957 CAMKMTQ7Z624 323 aa12.77□□□□□ -0.37
SCARB2-227ENST00000640957 OR4D10Q8NGI6 311 aa12.77□□□□□ -0.37
SCARB2-227ENST00000640957 ZNF296Q8WUU4 475 aaPredicted RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms