RNA–Protein interactions for RNA: ENST00000638889.1

CCDC7-211, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-211ENST00000638889 CELF6Q96J87 481 aaKnown RBP1.79□□□□□ -2.12
CCDC7-211ENST00000638889 NSMCE2Q96MF7 247 aa1.79□□□□□ -2.12
CCDC7-211ENST00000638889 ATP6V0BQ99437 205 aa1.79□□□□□ -2.12
CCDC7-211ENST00000638889 PLA2G2FQ9BZM2 168 aa1.79□□□□□ -2.12
CCDC7-211ENST00000638889 XPO4Q9C0E2 1151 aaKnown RBP1.79□□□□□ -2.12
CCDC7-211ENST00000638889 B3GNT2Q9NY97 397 aa1.79□□□□□ -2.12
CCDC7-211ENST00000638889 TTC21BQ7Z4L5 1316 aa1.79□□□□□ -2.12
CCDC7-211ENST00000638889 DHX57Q6P158 1386 aaKnown RBP1.79□□□□□ -2.12
CCDC7-211ENST00000638889 SLIT3O75094 1523 aa1.79□□□□□ -2.12
CCDC7-211ENST00000638889 KIF26AQ9ULI4 1882 aaPredicted RBP1.78□□□□□ -2.12
CCDC7-211ENST00000638889 PP2D1A8MPX8 630 aa1.78□□□□□ -2.12
CCDC7-211ENST00000638889 H3BMQ9 156 aa1.78□□□□□ -2.12
CCDC7-211ENST00000638889 DDX39AO00148 427 aaKnown RBP1.78□□□□□ -2.12
CCDC7-211ENST00000638889 SULT2B1O00204 365 aa1.78□□□□□ -2.12
CCDC7-211ENST00000638889 PES1O00541 588 aaKnown RBP1.78□□□□□ -2.12
CCDC7-211ENST00000638889 ECI2O75521 394 aa1.78□□□□□ -2.12
CCDC7-211ENST00000638889 CLUP10909 449 aa1.78□□□□□ -2.12
CCDC7-211ENST00000638889 DPP4P27487 766 aa1.78□□□□□ -2.12
CCDC7-211ENST00000638889 SFNP31947 248 aa1.78□□□□□ -2.12
CCDC7-211ENST00000638889 CYLC1P35663 651 aaPredicted RBP1.78□□□□□ -2.12
CCDC7-211ENST00000638889 BDKRB1P46663 353 aa1.78□□□□□ -2.12
CCDC7-211ENST00000638889 WASHC5Q12768 1159 aa1.78□□□□□ -2.12
CCDC7-211ENST00000638889 TIGITQ495A1 244 aa1.78□□□□□ -2.12
CCDC7-211ENST00000638889 C1QTNF12Q5T7M4 302 aa1.78□□□□□ -2.12
CCDC7-211ENST00000638889 LIPNQ5VXI9 398 aa1.78□□□□□ -2.12
CCDC7-211ENST00000638889 LRRC31Q6UY01 552 aa1.78□□□□□ -2.12
CCDC7-211ENST00000638889 NRMQ8IXM6 262 aa1.78□□□□□ -2.12
CCDC7-211ENST00000638889 MTURNQ8N3F0 131 aa1.78□□□□□ -2.12
CCDC7-211ENST00000638889 FAM71CQ8NEG0 241 aa1.78□□□□□ -2.12
CCDC7-211ENST00000638889 FAM151AQ8WW52 585 aa1.78□□□□□ -2.12
CCDC7-211ENST00000638889 PIGCQ92535 297 aa1.78□□□□□ -2.12
CCDC7-211ENST00000638889 FAM210BQ96KR6 192 aa1.78□□□□□ -2.12
CCDC7-211ENST00000638889 OR5B2Q96R09 309 aa1.78□□□□□ -2.12
CCDC7-211ENST00000638889 SLC30A2Q9BRI3 323 aa1.78□□□□□ -2.12
CCDC7-211ENST00000638889 ACAT2Q9BWD1 397 aa1.78□□□□□ -2.12
CCDC7-211ENST00000638889 POLD4Q9HCU8 107 aa1.78□□□□□ -2.12
CCDC7-211ENST00000638889 AIG1Q9NVV5 245 aa1.78□□□□□ -2.12
CCDC7-211ENST00000638889 MRPL39Q9NYK5 338 aaKnown RBP1.78□□□□□ -2.12
CCDC7-211ENST00000638889 STOX2Q9P2F5 926 aaPredicted RBP1.78□□□□□ -2.12
CCDC7-211ENST00000638889 MTRF1LQ9UGC7 380 aaKnown RBP1.78□□□□□ -2.12
CCDC7-211ENST00000638889 RNF6Q9Y252 685 aa1.78□□□□□ -2.12
CCDC7-211ENST00000638889 AP4B1Q9Y6B7 739 aa1.78□□□□□ -2.12
CCDC7-211ENST00000638889 ABCC4O15439 1325 aa1.77□□□□□ -2.13
CCDC7-211ENST00000638889 UBE4BO95155 1302 aa1.77□□□□□ -2.13
CCDC7-211ENST00000638889 A0A096LNJ9 63 aa1.77□□□□□ -2.13
CCDC7-211ENST00000638889 A0A0G2JRQ6 117 aa1.77□□□□□ -2.13
CCDC7-211ENST00000638889 IGHV3-64DA0A0J9YX35 117 aa1.77□□□□□ -2.13
CCDC7-211ENST00000638889 RIPK2O43353 540 aa1.77□□□□□ -2.13
CCDC7-211ENST00000638889 DUX1O43812 170 aa1.77□□□□□ -2.13
CCDC7-211ENST00000638889 MED6O75586 246 aa1.77□□□□□ -2.13
CCDC7-211ENST00000638889 BCAS2O75934 225 aaPredicted RBP1.77□□□□□ -2.13
CCDC7-211ENST00000638889 LALBAP00709 142 aa1.77□□□□□ -2.13
CCDC7-211ENST00000638889 IGKV1-17P01599 117 aa1.77□□□□□ -2.13
CCDC7-211ENST00000638889 RNH1P13489 461 aaKnown RBP1.77□□□□□ -2.13
CCDC7-211ENST00000638889 HLA-DPA1P20036 260 aa1.77□□□□□ -2.13
CCDC7-211ENST00000638889 SLC26A5P58743 744 aa1.77□□□□□ -2.13
CCDC7-211ENST00000638889 MADCAM1Q13477 382 aa1.77□□□□□ -2.13
CCDC7-211ENST00000638889 ARFRP1Q13795 201 aa1.77□□□□□ -2.13
CCDC7-211ENST00000638889 LAGE3Q14657 143 aa1.77□□□□□ -2.13
CCDC7-211ENST00000638889 CHI3L2Q15782 390 aa1.77□□□□□ -2.13
CCDC7-211ENST00000638889 CCDC184Q52MB2 194 aa1.77□□□□□ -2.13
CCDC7-211ENST00000638889 RABGAP1LQ5R372 815 aa1.77□□□□□ -2.13
CCDC7-211ENST00000638889 FAM199XQ6PEV8 388 aaPredicted RBP1.77□□□□□ -2.13
CCDC7-211ENST00000638889 ACP7Q6ZNF0 438 aa1.77□□□□□ -2.13
CCDC7-211ENST00000638889 PNKDQ8N490 385 aa1.77□□□□□ -2.13
CCDC7-211ENST00000638889 OR51G1Q8NGK1 321 aa1.77□□□□□ -2.13
CCDC7-211ENST00000638889 PAQR8Q8TEZ7 354 aa1.77□□□□□ -2.13
CCDC7-211ENST00000638889 AENQ8WTP8 325 aaKnown RBP1.77□□□□□ -2.13
CCDC7-211ENST00000638889 FCGR1BQ92637 280 aa1.77□□□□□ -2.13
CCDC7-211ENST00000638889 VSTM2LQ96N03 204 aa1.77□□□□□ -2.13
CCDC7-211ENST00000638889 OR2M2Q96R28 347 aa1.77□□□□□ -2.13
CCDC7-211ENST00000638889 RUFY1Q96T51 708 aa1.77□□□□□ -2.13
CCDC7-211ENST00000638889 RASL11BQ9BPW5 248 aa1.77□□□□□ -2.13
CCDC7-211ENST00000638889 NRIP2Q9BQI9 281 aa1.77□□□□□ -2.13
CCDC7-211ENST00000638889 TBCDQ9BTW9 1192 aa1.77□□□□□ -2.13
CCDC7-211ENST00000638889 ANO10Q9NW15 660 aa1.77□□□□□ -2.13
CCDC7-211ENST00000638889 C6orf203Q9P0P8 240 aaPredicted RBP1.77□□□□□ -2.13
CCDC7-211ENST00000638889 MTRRQ9UBK8 725 aa1.77□□□□□ -2.13
CCDC7-211ENST00000638889 PHF11Q9UIL8 331 aa1.77□□□□□ -2.13
CCDC7-211ENST00000638889 MTCL1Q9Y4B5 1905 aaKnown RBP1.76□□□□□ -2.13
CCDC7-211ENST00000638889 SLITRK3O94933 977 aa1.76□□□□□ -2.13
CCDC7-211ENST00000638889 SLC25A27O95847 323 aa1.76□□□□□ -2.13
CCDC7-211ENST00000638889 PCCBP05166 539 aa1.76□□□□□ -2.13
CCDC7-211ENST00000638889 ZNF136P52737 540 aa1.76□□□□□ -2.13
CCDC7-211ENST00000638889 PLK1P53350 603 aa1.76□□□□□ -2.13
CCDC7-211ENST00000638889 ATXN3P54252 364 aaPredicted RBP1.76□□□□□ -2.13
CCDC7-211ENST00000638889 YBEYP58557 167 aaPredicted RBP1.76□□□□□ -2.13
CCDC7-211ENST00000638889 CHRNB3Q05901 458 aa1.76□□□□□ -2.13
CCDC7-211ENST00000638889 RIPPLY1Q0D2K3 151 aa1.76□□□□□ -2.13
CCDC7-211ENST00000638889 CCDC173Q0VFZ6 552 aa1.76□□□□□ -2.13
CCDC7-211ENST00000638889 GGTLC2Q14390 218 aa1.76□□□□□ -2.13
CCDC7-211ENST00000638889 ATXN7L3Q14CW9 347 aaPredicted RBP1.76□□□□□ -2.13
CCDC7-211ENST00000638889 ADPRMQ3LIE5 342 aa1.76□□□□□ -2.13
CCDC7-211ENST00000638889 FAHD2BQ6P2I3 314 aaPredicted RBP1.76□□□□□ -2.13
CCDC7-211ENST00000638889 IGFL1Q6UW32 110 aa1.76□□□□□ -2.13
CCDC7-211ENST00000638889 COX15Q7KZN9 410 aa1.76□□□□□ -2.13
CCDC7-211ENST00000638889 ANKRD37Q7Z713 158 aa1.76□□□□□ -2.13
CCDC7-211ENST00000638889 TMEM61Q8N0U2 210 aa1.76□□□□□ -2.13
CCDC7-211ENST00000638889 GIPC3Q8TF64 312 aa1.76□□□□□ -2.13
CCDC7-211ENST00000638889 DEDD2Q8WXF8 326 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms