RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, human

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLN6-223	ENST00000637823	PAPOLB	Q9NRJ5	636 aa	Known RBP	10.76	□□□□□ -0.69
CLN6-223	ENST00000637823	FAM118A	Q9NWS6	357 aa		10.76	□□□□□ -0.69
CLN6-223	ENST00000637823	ENOPH1	Q9UHY7	261 aa		10.76	□□□□□ -0.69
CLN6-223	ENST00000637823	TEKT2	Q9UIF3	430 aa		10.76	□□□□□ -0.69
CLN6-223	ENST00000637823	ICAM5	Q9UMF0	924 aa		10.76	□□□□□ -0.69
CLN6-223	ENST00000637823	LRCH1	Q9Y2L9	728 aa		10.76	□□□□□ -0.69
CLN6-223	ENST00000637823	CFAP54	Q96N23	3096 aa		10.76	□□□□□ -0.69
CLN6-223	ENST00000637823	CACNA1A	O00555	2505 aa		10.75	□□□□□ -0.69
CLN6-223	ENST00000637823	CDK2AP1	O14519	115 aa		10.75	□□□□□ -0.69
CLN6-223	ENST00000637823	ADAM10	O14672	748 aa		10.75	□□□□□ -0.69
CLN6-223	ENST00000637823	CHP2	O43745	196 aa		10.75	□□□□□ -0.69
CLN6-223	ENST00000637823	MAN1A2	O60476	641 aa		10.75	□□□□□ -0.69
CLN6-223	ENST00000637823	MITF	O75030	526 aa	Predicted RBP	10.75	□□□□□ -0.69
CLN6-223	ENST00000637823	ADA	P00813	363 aa		10.75	□□□□□ -0.69
CLN6-223	ENST00000637823	PGC	P20142	388 aa		10.75	□□□□□ -0.69
CLN6-223	ENST00000637823	ITPKB	P27987	946 aa		10.75	□□□□□ -0.69
CLN6-223	ENST00000637823	MSX1	P28360	303 aa		10.75	□□□□□ -0.69
CLN6-223	ENST00000637823	CASP3	P42574	277 aa		10.75	□□□□□ -0.69
CLN6-223	ENST00000637823	RBM34	P42696	430 aa	Known RBP	10.75	□□□□□ -0.69
CLN6-223	ENST00000637823	IDH2	P48735	452 aa	Known RBP	10.75	□□□□□ -0.69
CLN6-223	ENST00000637823	CCR4	P51679	360 aa		10.75	□□□□□ -0.69
CLN6-223	ENST00000637823	UGT2B15	P54855	530 aa		10.75	□□□□□ -0.69
CLN6-223	ENST00000637823	RRAD	P55042	308 aa		10.75	□□□□□ -0.69
CLN6-223	ENST00000637823	IL1RL1	Q01638	556 aa		10.75	□□□□□ -0.69
CLN6-223	ENST00000637823	COX10	Q12887	443 aa		10.75	□□□□□ -0.69
CLN6-223	ENST00000637823	FOXC1	Q12948	553 aa		10.75	□□□□□ -0.69
CLN6-223	ENST00000637823	CRTC2	Q53ET0	693 aa	Predicted RBP	10.75	□□□□□ -0.69
CLN6-223	ENST00000637823	SLC30A6	Q6NXT4	461 aa		10.75	□□□□□ -0.69
CLN6-223	ENST00000637823	C1orf94	Q6P1W5	598 aa		10.75	□□□□□ -0.69
CLN6-223	ENST00000637823	PGBD2	Q6P3X8	592 aa		10.75	□□□□□ -0.69
CLN6-223	ENST00000637823	CBLN3	Q6UW01	205 aa		10.75	□□□□□ -0.69
CLN6-223	ENST00000637823	CD300LD	Q6UXZ3	194 aa		10.75	□□□□□ -0.69
CLN6-223	ENST00000637823	MBOAT2	Q6ZWT7	520 aa		10.75	□□□□□ -0.69
CLN6-223	ENST00000637823	GALNT5	Q7Z7M9	940 aa		10.75	□□□□□ -0.69
CLN6-223	ENST00000637823	VASH2	Q86V25	355 aa		10.75	□□□□□ -0.69
CLN6-223	ENST00000637823	GPALPP1	Q8IXQ4	340 aa		10.75	□□□□□ -0.69
CLN6-223	ENST00000637823	CADM2	Q8N3J6	435 aa		10.75	□□□□□ -0.69
CLN6-223	ENST00000637823	SIRT6	Q8N6T7	355 aa		10.75	□□□□□ -0.69
CLN6-223	ENST00000637823	AQP11	Q8NBQ7	271 aa		10.75	□□□□□ -0.69
CLN6-223	ENST00000637823	CLEC1A	Q8NC01	280 aa		10.75	□□□□□ -0.69
CLN6-223	ENST00000637823	OR5W2	Q8NH69	310 aa		10.75	□□□□□ -0.69
CLN6-223	ENST00000637823	B4GALNT2	Q8NHY0	566 aa		10.75	□□□□□ -0.69
CLN6-223	ENST00000637823	PIGX	Q8TBF5	258 aa		10.75	□□□□□ -0.69
CLN6-223	ENST00000637823	BRIX1	Q8TDN6	353 aa	Known RBP	10.75	□□□□□ -0.69
CLN6-223	ENST00000637823	GNPDA2	Q8TDQ7	276 aa		10.75	□□□□□ -0.69
CLN6-223	ENST00000637823	ARSG	Q96EG1	525 aa		10.75	□□□□□ -0.69
CLN6-223	ENST00000637823	SH3YL1	Q96HL8	342 aa	Predicted RBP	10.75	□□□□□ -0.69
CLN6-223	ENST00000637823	SGCZ	Q96LD1	299 aa		10.75	□□□□□ -0.69
CLN6-223	ENST00000637823	MBOAT4	Q96T53	435 aa		10.75	□□□□□ -0.69
CLN6-223	ENST00000637823	NIPSNAP1	Q9BPW8	284 aa		10.75	□□□□□ -0.69
CLN6-223	ENST00000637823	UCK2	Q9BZX2	261 aa		10.75	□□□□□ -0.69
CLN6-223	ENST00000637823	METTL7A	Q9H8H3	244 aa		10.75	□□□□□ -0.69
CLN6-223	ENST00000637823	CPNE5	Q9HCH3	593 aa		10.75	□□□□□ -0.69
CLN6-223	ENST00000637823	KRCC1	Q9NPI7	259 aa	Predicted RBP	10.75	□□□□□ -0.69
CLN6-223	ENST00000637823	STMN3	Q9NZ72	180 aa		10.75	□□□□□ -0.69
CLN6-223	ENST00000637823	KLRF1	Q9NZS2	232 aa		10.75	□□□□□ -0.69
CLN6-223	ENST00000637823	CNIH4	Q9P003	139 aa		10.75	□□□□□ -0.69
CLN6-223	ENST00000637823	KLK13	Q9UKR3	277 aa		10.75	□□□□□ -0.69
CLN6-223	ENST00000637823	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	10.75	□□□□□ -0.69
CLN6-223	ENST00000637823	PIEZO1	Q92508	2521 aa		10.74	□□□□□ -0.69
CLN6-223	ENST00000637823	IGLV3-32	A0A0A0MS00	114 aa		10.74	□□□□□ -0.69
CLN6-223	ENST00000637823	SLC16A6	O15403	523 aa		10.74	□□□□□ -0.69
CLN6-223	ENST00000637823	PNMT	P11086	282 aa		10.74	□□□□□ -0.69
CLN6-223	ENST00000637823	GP1BB	P13224	206 aa		10.74	□□□□□ -0.69
CLN6-223	ENST00000637823	GSTM3	P21266	225 aa		10.74	□□□□□ -0.69
CLN6-223	ENST00000637823	PTGDS	P41222	190 aa		10.74	□□□□□ -0.69
CLN6-223	ENST00000637823	SLC1A3	P43003	542 aa		10.74	□□□□□ -0.69
CLN6-223	ENST00000637823	HLCS	P50747	726 aa		10.74	□□□□□ -0.69
CLN6-223	ENST00000637823	RPS6KA3	P51812	740 aa		10.74	□□□□□ -0.69
CLN6-223	ENST00000637823	SUMO3	P55854	103 aa	Predicted RBP	10.74	□□□□□ -0.69
CLN6-223	ENST00000637823	SOX8	P57073	446 aa		10.74	□□□□□ -0.69
CLN6-223	ENST00000637823	ESRRG	P62508	458 aa		10.74	□□□□□ -0.69
CLN6-223	ENST00000637823	NPRL3	Q12980	569 aa		10.74	□□□□□ -0.69
CLN6-223	ENST00000637823	CLN3	Q13286	438 aa		10.74	□□□□□ -0.69
CLN6-223	ENST00000637823	KCNAB2	Q13303	367 aa		10.74	□□□□□ -0.69
CLN6-223	ENST00000637823	CBFB	Q13951	182 aa		10.74	□□□□□ -0.69
CLN6-223	ENST00000637823	ALG10B	Q5I7T1	473 aa		10.74	□□□□□ -0.69
CLN6-223	ENST00000637823	SLC22A10	Q63ZE4	541 aa		10.74	□□□□□ -0.69
CLN6-223	ENST00000637823	TTC33	Q6PID6	262 aa	Predicted RBP	10.74	□□□□□ -0.69
CLN6-223	ENST00000637823	RTL4	Q6ZR62	310 aa		10.74	□□□□□ -0.69
CLN6-223	ENST00000637823	PRICKLE2	Q7Z3G6	844 aa		10.74	□□□□□ -0.69
CLN6-223	ENST00000637823	ZER1	Q7Z7L7	766 aa		10.74	□□□□□ -0.69
CLN6-223	ENST00000637823	CDK20	Q8IZL9	346 aa		10.74	□□□□□ -0.69
CLN6-223	ENST00000637823	PARP8	Q8N3A8	854 aa		10.74	□□□□□ -0.69
CLN6-223	ENST00000637823	MARVELD2	Q8N4S9	558 aa		10.74	□□□□□ -0.69
CLN6-223	ENST00000637823	ZNF563	Q8TA94	476 aa		10.74	□□□□□ -0.69
CLN6-223	ENST00000637823	RNF217	Q8TC41	542 aa		10.74	□□□□□ -0.69
CLN6-223	ENST00000637823	GPR119	Q8TDV5	335 aa		10.74	□□□□□ -0.69
CLN6-223	ENST00000637823	PAQR8	Q8TEZ7	354 aa		10.74	□□□□□ -0.69
CLN6-223	ENST00000637823	TMEM255B	Q8WV15	326 aa		10.74	□□□□□ -0.69
CLN6-223	ENST00000637823	TMEM239	Q8WW34	195 aa		10.74	□□□□□ -0.69
CLN6-223	ENST00000637823	FGF11	Q92914	225 aa		10.74	□□□□□ -0.69
CLN6-223	ENST00000637823	GTPBP3	Q969Y2	492 aa	Known RBP	10.74	□□□□□ -0.69
CLN6-223	ENST00000637823	FRMD6	Q96NE9	622 aa		10.74	□□□□□ -0.69
CLN6-223	ENST00000637823	GABARAPL3	Q9BY60	117 aa		10.74	□□□□□ -0.69
CLN6-223	ENST00000637823	ANGPTL4	Q9BY76	406 aa		10.74	□□□□□ -0.69
CLN6-223	ENST00000637823	ANKRD60	Q9BZ19	345 aa		10.74	□□□□□ -0.69
CLN6-223	ENST00000637823	ADAM19	Q9H013	955 aa		10.74	□□□□□ -0.69
CLN6-223	ENST00000637823	C12orf10	Q9HB07	376 aa		10.74	□□□□□ -0.69
CLN6-223	ENST00000637823	SH2D2A	Q9NP31	389 aa		10.74	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms