RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 DNAJC22Q8N4W6 341 aa10.69□□□□□ -0.7
CLN6-217ENST00000636964 OR6T1Q8NGN1 323 aa10.69□□□□□ -0.7
CLN6-217ENST00000636964 UCK2Q9BZX2 261 aa10.69□□□□□ -0.7
CLN6-217ENST00000636964 ZMIZ1Q9ULJ6 1067 aa10.69□□□□□ -0.7
CLN6-217ENST00000636964 TRAPPC4Q9Y296 219 aa10.69□□□□□ -0.7
CLN6-217ENST00000636964 FAM25AB3EWG3 89 aa10.68□□□□□ -0.7
CLN6-217ENST00000636964 FAM25CB3EWG5 89 aa10.68□□□□□ -0.7
CLN6-217ENST00000636964 FAM25GB3EWG6 89 aa10.68□□□□□ -0.7
CLN6-217ENST00000636964 UGT2B17O75795 530 aa10.68□□□□□ -0.7
CLN6-217ENST00000636964 GPR75O95800 540 aa10.68□□□□□ -0.7
CLN6-217ENST00000636964 AZGP1P25311 298 aaKnown RBP10.68□□□□□ -0.7
CLN6-217ENST00000636964 FNTBP49356 437 aa10.68□□□□□ -0.7
CLN6-217ENST00000636964 AFF3P51826 1226 aaKnown RBP10.68□□□□□ -0.7
CLN6-217ENST00000636964 RNF4P78317 190 aa10.68□□□□□ -0.7
CLN6-217ENST00000636964 LSM11P83369 360 aaKnown RBP eCLIP10.68□□□□□ -0.7
CLN6-217ENST00000636964 ALDH6A1Q02252 535 aaKnown RBP10.68□□□□□ -0.7
CLN6-217ENST00000636964 TAB1Q15750 504 aa10.68□□□□□ -0.7
CLN6-217ENST00000636964 DUSP5Q16690 384 aa10.68□□□□□ -0.7
CLN6-217ENST00000636964 C14orf28Q4W4Y0 310 aa10.68□□□□□ -0.7
CLN6-217ENST00000636964 ZNF311Q5JNZ3 666 aa10.68□□□□□ -0.7
CLN6-217ENST00000636964 CLEC2AQ6UVW9 174 aa10.68□□□□□ -0.7
CLN6-217ENST00000636964 SLC25A45Q8N413 288 aa10.68□□□□□ -0.7
CLN6-217ENST00000636964 BBS10Q8TAM1 723 aa10.68□□□□□ -0.7
CLN6-217ENST00000636964 GON7Q9BXV9 100 aa10.68□□□□□ -0.7
CLN6-217ENST00000636964 PCED1AQ9H1Q7 454 aa10.68□□□□□ -0.7
CLN6-217ENST00000636964 FSCN3Q9NQT6 498 aa10.68□□□□□ -0.7
CLN6-217ENST00000636964 ENAMQ9NRM1 1142 aa10.68□□□□□ -0.7
CLN6-217ENST00000636964 GPR55Q9Y2T6 319 aaPredicted RBP10.68□□□□□ -0.7
CLN6-217ENST00000636964 PCDHGB2Q9Y5G2 931 aa10.68□□□□□ -0.7
CLN6-217ENST00000636964 POU1F1P28069 291 aa10.68□□□□□ -0.7
CLN6-217ENST00000636964 IDH2P48735 452 aaKnown RBP10.68□□□□□ -0.7
CLN6-217ENST00000636964 DHPSP49366 369 aaPredicted RBP10.68□□□□□ -0.7
CLN6-217ENST00000636964 RGS19P49795 217 aa10.68□□□□□ -0.7
CLN6-217ENST00000636964 KRR1Q13601 381 aaKnown RBP10.68□□□□□ -0.7
CLN6-217ENST00000636964 TMEM95Q3KNT9 176 aa10.68□□□□□ -0.7
CLN6-217ENST00000636964 MANEAQ5SRI9 462 aa10.68□□□□□ -0.7
CLN6-217ENST00000636964 SLC36A4Q6YBV0 504 aa10.68□□□□□ -0.7
CLN6-217ENST00000636964 GLCCI1Q86VQ1 547 aa10.68□□□□□ -0.7
CLN6-217ENST00000636964 SETD9Q8NE22 299 aa10.68□□□□□ -0.7
CLN6-217ENST00000636964 AHCYL2Q96HN2 611 aaKnown RBP10.68□□□□□ -0.7
CLN6-217ENST00000636964 HDHD5Q9BXW7 423 aa10.68□□□□□ -0.7
CLN6-217ENST00000636964 SPRTNQ9H040 489 aaPredicted RBP10.68□□□□□ -0.7
CLN6-217ENST00000636964 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.68□□□□□ -0.72e-6■■■■□ 20.3
CLN6-217ENST00000636964 PEX16Q9Y5Y5 336 aa10.68□□□□□ -0.7
CLN6-217ENST00000636964 A0A1W2PQ09 198 aa10.68□□□□□ -0.7
CLN6-217ENST00000636964 OR6C70A6NIJ9 312 aa10.68□□□□□ -0.7
CLN6-217ENST00000636964 A6NJY4 79 aa10.68□□□□□ -0.7
CLN6-217ENST00000636964 FOXS1O43638 330 aa10.68□□□□□ -0.7
CLN6-217ENST00000636964 ANXA8P13928 327 aa10.68□□□□□ -0.7
CLN6-217ENST00000636964 LIMS1P48059 325 aa10.68□□□□□ -0.7
CLN6-217ENST00000636964 RFX3P48380 749 aa10.68□□□□□ -0.7
CLN6-217ENST00000636964 ZNF628Q5EBL2 1059 aa10.68□□□□□ -0.7
CLN6-217ENST00000636964 SPANXN2Q5MJ10 180 aa10.68□□□□□ -0.7
CLN6-217ENST00000636964 ZC3H14Q6PJT7 736 aaKnown RBP10.68□□□□□ -0.7
CLN6-217ENST00000636964 MEX3DQ86XN8 651 aaKnown RBP10.68□□□□□ -0.7
CLN6-217ENST00000636964 OR2L13Q8N349 312 aa10.68□□□□□ -0.7
CLN6-217ENST00000636964 YIPF7Q8N8F6 280 aa10.68□□□□□ -0.7
CLN6-217ENST00000636964 GPR151Q8TDV0 419 aa10.68□□□□□ -0.7
CLN6-217ENST00000636964 DEDD2Q8WXF8 326 aa10.68□□□□□ -0.7
CLN6-217ENST00000636964 DNASE2BQ8WZ79 361 aa10.68□□□□□ -0.7
CLN6-217ENST00000636964 ANKRD9Q96BM1 317 aaPredicted RBP10.68□□□□□ -0.7
CLN6-217ENST00000636964 TCTN2Q96GX1 697 aa10.68□□□□□ -0.7
CLN6-217ENST00000636964 MS4A4EQ96PG1 132 aa10.68□□□□□ -0.7
CLN6-217ENST00000636964 SLC30A2Q9BRI3 323 aa10.68□□□□□ -0.7
CLN6-217ENST00000636964 CCDC32Q9BV29 185 aa10.68□□□□□ -0.7
CLN6-217ENST00000636964 ZNF556Q9HAH1 456 aa10.68□□□□□ -0.7
CLN6-217ENST00000636964 BCL2L10Q9HD36 194 aa10.68□□□□□ -0.7
CLN6-217ENST00000636964 FBXO34Q9NWN3 711 aa10.68□□□□□ -0.7
CLN6-217ENST00000636964 SLC6A14Q9UN76 642 aa10.68□□□□□ -0.7
CLN6-217ENST00000636964 PCDHGB7Q9Y5F8 929 aa10.68□□□□□ -0.7
CLN6-217ENST00000636964 PCDHGA6Q9Y5G7 932 aa10.68□□□□□ -0.7
CLN6-217ENST00000636964 SEC16AO15027 2179 aa10.68□□□□□ -0.7
CLN6-217ENST00000636964 RP1P56715 2156 aa10.67□□□□□ -0.7
CLN6-217ENST00000636964 ARID1BQ8NFD5 2236 aaPredicted RBP10.67□□□□□ -0.7
CLN6-217ENST00000636964 A0A0G2JPF8 293 aa10.67□□□□□ -0.7
CLN6-217ENST00000636964 A8MVJ9 347 aa10.67□□□□□ -0.7
CLN6-217ENST00000636964 HNRNPCL3B7ZW38 293 aa10.67□□□□□ -0.7
CLN6-217ENST00000636964 KIAA0513O60268 411 aa10.67□□□□□ -0.7
CLN6-217ENST00000636964 OR10H3O60404 316 aa10.67□□□□□ -0.7
CLN6-217ENST00000636964 SLITRK5O94991 958 aa10.67□□□□□ -0.7
CLN6-217ENST00000636964 NTN1O95631 604 aa10.67□□□□□ -0.7
CLN6-217ENST00000636964 RPLP0P05388 317 aaKnown RBP10.67□□□□□ -0.7
CLN6-217ENST00000636964 IGFBP1P08833 259 aaPredicted RBP10.67□□□□□ -0.7
CLN6-217ENST00000636964 TRAPPC2P0DI81 140 aa10.67□□□□□ -0.7
CLN6-217ENST00000636964 TRAPPC2BP0DI82 140 aa10.67□□□□□ -0.7
CLN6-217ENST00000636964 HNRNPCL4P0DMR1 293 aa10.67□□□□□ -0.7
CLN6-217ENST00000636964 ADORA3P0DMS8 318 aa10.67□□□□□ -0.7
CLN6-217ENST00000636964 ACP2P11117 423 aa10.67□□□□□ -0.7
CLN6-217ENST00000636964 HMGA2P52926 109 aa10.67□□□□□ -0.7
CLN6-217ENST00000636964 NCF4Q15080 339 aa10.67□□□□□ -0.7
CLN6-217ENST00000636964 ESCO2Q56NI9 601 aa10.67□□□□□ -0.7
CLN6-217ENST00000636964 PRAMEF17Q5VTA0 474 aa10.67□□□□□ -0.7
CLN6-217ENST00000636964 NKAIN4Q8IVV8 208 aa10.67□□□□□ -0.7
CLN6-217ENST00000636964 ZNF680Q8NEM1 530 aa10.67□□□□□ -0.7
CLN6-217ENST00000636964 NLGN4YQ8NFZ3 816 aaPredicted RBP10.67□□□□□ -0.7
CLN6-217ENST00000636964 MMABQ96EY8 250 aaPredicted RBP10.67□□□□□ -0.7
CLN6-217ENST00000636964 APOL4Q9BPW4 351 aa10.67□□□□□ -0.7
CLN6-217ENST00000636964 COPS4Q9BT78 406 aa10.67□□□□□ -0.7
CLN6-217ENST00000636964 SLC23A1Q9UHI7 598 aa10.67□□□□□ -0.7
CLN6-217ENST00000636964 HSPE1-MOB4S4R3N1 261 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms