RNA–Protein interactions for RNA: ENST00000635917.1

CACNA1A-219, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,832 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-219ENST00000635917 C9orf43Q8TAL5 461 aaPredicted RBP11.5□□□□□ -0.57
CACNA1A-219ENST00000635917 BPIFA2Q96DR5 249 aa11.5□□□□□ -0.57
CACNA1A-219ENST00000635917 CLIP3Q96DZ5 547 aa11.5□□□□□ -0.57
CACNA1A-219ENST00000635917 LRR1Q96L50 414 aa11.5□□□□□ -0.57
CACNA1A-219ENST00000635917 DCUN1D5Q9BTE7 237 aa11.5□□□□□ -0.57
CACNA1A-219ENST00000635917 WWTR1Q9GZV5 400 aa11.5□□□□□ -0.57
CACNA1A-219ENST00000635917 HHATLQ9HCP6 504 aa11.5□□□□□ -0.57
CACNA1A-219ENST00000635917 PPIEQ9UNP9 301 aaKnown RBP11.5□□□□□ -0.57
CACNA1A-219ENST00000635917 SIGLEC7Q9Y286 467 aa11.5□□□□□ -0.57
CACNA1A-219ENST00000635917 SLC35A3Q9Y2D2 325 aa11.5□□□□□ -0.57
CACNA1A-219ENST00000635917 CACNA1HO95180 2353 aa11.5□□□□□ -0.57
CACNA1A-219ENST00000635917 C2orf92A0A1B0GVN3 265 aa11.49□□□□□ -0.57
CACNA1A-219ENST00000635917 OR6C76A6NM76 312 aa11.49□□□□□ -0.57
CACNA1A-219ENST00000635917 KDM4EB2RXH2 506 aaPredicted RBP11.49□□□□□ -0.57
CACNA1A-219ENST00000635917 ADAM10O14672 748 aa11.49□□□□□ -0.57
CACNA1A-219ENST00000635917 OIP5O43482 229 aa11.49□□□□□ -0.57
CACNA1A-219ENST00000635917 SYPP08247 313 aa11.49□□□□□ -0.57
CACNA1A-219ENST00000635917 FGF5P12034 268 aa11.49□□□□□ -0.57
CACNA1A-219ENST00000635917 IFI30P13284 250 aa11.49□□□□□ -0.57
CACNA1A-219ENST00000635917 ZNF182P17025 639 aaPredicted RBP11.49□□□□□ -0.57
CACNA1A-219ENST00000635917 LCN1P31025 176 aa11.49□□□□□ -0.57
CACNA1A-219ENST00000635917 SKP2Q13309 424 aa11.49□□□□□ -0.57
CACNA1A-219ENST00000635917 SPCS2Q15005 226 aa11.49□□□□□ -0.57
CACNA1A-219ENST00000635917 PGGHGQ32M88 737 aa11.49□□□□□ -0.57
CACNA1A-219ENST00000635917 ALG10BQ5I7T1 473 aa11.49□□□□□ -0.57
CACNA1A-219ENST00000635917 CLEC12AQ5QGZ9 265 aa11.49□□□□□ -0.57
CACNA1A-219ENST00000635917 AADACL4Q5VUY2 407 aa11.49□□□□□ -0.57
CACNA1A-219ENST00000635917 ULK3Q6PHR2 472 aa11.49□□□□□ -0.57
CACNA1A-219ENST00000635917 C19orf48Q6RUI8 117 aa11.49□□□□□ -0.57
CACNA1A-219ENST00000635917 OVCH1Q7RTY7 1134 aa11.49□□□□□ -0.57
CACNA1A-219ENST00000635917 APCDD1LQ8NCL9 501 aa11.49□□□□□ -0.57
CACNA1A-219ENST00000635917 GRHL3Q8TE85 626 aa11.49□□□□□ -0.57
CACNA1A-219ENST00000635917 ZNF524Q96C55 264 aa11.49□□□□□ -0.57
CACNA1A-219ENST00000635917 RTN4RQ9BZR6 473 aa11.49□□□□□ -0.57
CACNA1A-219ENST00000635917 NRSN2Q9GZP1 204 aa11.49□□□□□ -0.57
CACNA1A-219ENST00000635917 HOXD1Q9GZZ0 328 aa11.49□□□□□ -0.57
CACNA1A-219ENST00000635917 SLC26A1Q9H2B4 701 aa11.49□□□□□ -0.57
CACNA1A-219ENST00000635917 OR52D1Q9H346 318 aa11.49□□□□□ -0.57
CACNA1A-219ENST00000635917 UBQLN3Q9H347 655 aa11.49□□□□□ -0.57
CACNA1A-219ENST00000635917 SMOC1Q9H4F8 434 aa11.49□□□□□ -0.57
CACNA1A-219ENST00000635917 KRCC1Q9NPI7 259 aaPredicted RBP11.49□□□□□ -0.57
CACNA1A-219ENST00000635917 EXOSC3Q9NQT5 275 aaKnown RBP11.49□□□□□ -0.57
CACNA1A-219ENST00000635917 MED17Q9NVC6 651 aa11.49□□□□□ -0.57
CACNA1A-219ENST00000635917 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.49□□□□□ -0.57
CACNA1A-219ENST00000635917 MED31Q9Y3C7 131 aa11.49□□□□□ -0.57
CACNA1A-219ENST00000635917 RPL36Q9Y3U8 105 aaKnown RBP11.49□□□□□ -0.57
CACNA1A-219ENST00000635917 KMT2EQ8IZD2 1858 aa11.49□□□□□ -0.57
CACNA1A-219ENST00000635917 A0A087WUJ7 227 aa11.49□□□□□ -0.57
CACNA1A-219ENST00000635917 UNC119BA6NIH7 251 aa11.49□□□□□ -0.57
CACNA1A-219ENST00000635917 IDSB3KWA1 339 aa11.49□□□□□ -0.57
CACNA1A-219ENST00000635917 GDF9O60383 454 aa11.49□□□□□ -0.57
CACNA1A-219ENST00000635917 UTS2O95399 124 aa11.49□□□□□ -0.57
CACNA1A-219ENST00000635917 ZNF883P0CG24 379 aa11.49□□□□□ -0.57
CACNA1A-219ENST00000635917 NR4A1P22736 598 aa11.49□□□□□ -0.57
CACNA1A-219ENST00000635917 MST1P26927 711 aa11.49□□□□□ -0.57
CACNA1A-219ENST00000635917 DCDP81605 110 aaKnown RBP11.49□□□□□ -0.57
CACNA1A-219ENST00000635917 LPAL2Q16609 132 aa11.49□□□□□ -0.57
CACNA1A-219ENST00000635917 LCN10Q6JVE6 187 aa11.49□□□□□ -0.57
CACNA1A-219ENST00000635917 CBLN3Q6UW01 205 aa11.49□□□□□ -0.57
CACNA1A-219ENST00000635917 THSD4Q6ZMP0 1018 aa11.49□□□□□ -0.57
CACNA1A-219ENST00000635917 SHISA6Q6ZSJ9 500 aa11.49□□□□□ -0.57
CACNA1A-219ENST00000635917 SLC46A3Q7Z3Q1 461 aa11.49□□□□□ -0.57
CACNA1A-219ENST00000635917 P2RY8Q86VZ1 359 aa11.49□□□□□ -0.57
CACNA1A-219ENST00000635917 PPP1R3BQ86XI6 285 aa11.49□□□□□ -0.57
CACNA1A-219ENST00000635917 CACTIN-AS1Q8N1I8 211 aa11.49□□□□□ -0.57
CACNA1A-219ENST00000635917 LNX2Q8N448 690 aa11.49□□□□□ -0.57
CACNA1A-219ENST00000635917 C3orf49Q96BT1 292 aa11.49□□□□□ -0.57
CACNA1A-219ENST00000635917 CRELD1Q96HD1 420 aa11.49□□□□□ -0.57
CACNA1A-219ENST00000635917 SAMD8Q96LT4 415 aa11.49□□□□□ -0.57
CACNA1A-219ENST00000635917 OR5M11Q96RB7 305 aa11.49□□□□□ -0.57
CACNA1A-219ENST00000635917 GFM1Q96RP9 751 aaKnown RBP11.49□□□□□ -0.57
CACNA1A-219ENST00000635917 SPSB2Q99619 263 aa11.49□□□□□ -0.57
CACNA1A-219ENST00000635917 KLHDC3Q9BQ90 382 aa11.49□□□□□ -0.57
CACNA1A-219ENST00000635917 WDR77Q9BQA1 342 aaPredicted RBP11.49□□□□□ -0.57
CACNA1A-219ENST00000635917 TBC1D23Q9NUY8 699 aa11.49□□□□□ -0.57
CACNA1A-219ENST00000635917 IL20RAQ9UHF4 553 aa11.49□□□□□ -0.57
CACNA1A-219ENST00000635917 ICAM5Q9UMF0 924 aa11.49□□□□□ -0.57
CACNA1A-219ENST00000635917 TMEM5Q9Y2B1 443 aa11.49□□□□□ -0.57
CACNA1A-219ENST00000635917 GPR52Q9Y2T5 361 aa11.49□□□□□ -0.57
CACNA1A-219ENST00000635917 PRODHO43272 600 aa11.48□□□□□ -0.57
CACNA1A-219ENST00000635917 SLC34A2O95436 690 aa11.48□□□□□ -0.57
CACNA1A-219ENST00000635917 CDK4P11802 303 aa11.48□□□□□ -0.57
CACNA1A-219ENST00000635917 DUSP3P51452 185 aaPredicted RBP11.48□□□□□ -0.57
CACNA1A-219ENST00000635917 DAB2P98082 770 aa11.48□□□□□ -0.57
CACNA1A-219ENST00000635917 OCA2Q04671 838 aa11.48□□□□□ -0.57
CACNA1A-219ENST00000635917 TRA2AQ13595 282 aaKnown RBP eCLIP11.48□□□□□ -0.57
CACNA1A-219ENST00000635917 TIGD6Q17RP2 521 aa11.48□□□□□ -0.57
CACNA1A-219ENST00000635917 ZNF362Q5T0B9 420 aaPredicted RBP11.48□□□□□ -0.57
CACNA1A-219ENST00000635917 TCEAL6Q6IPX3 200 aa11.48□□□□□ -0.57
CACNA1A-219ENST00000635917 MRPL14Q6P1L8 145 aaKnown RBP11.48□□□□□ -0.57
CACNA1A-219ENST00000635917 ANKRD37Q7Z713 158 aa11.48□□□□□ -0.57
CACNA1A-219ENST00000635917 BPHLQ86WA6 291 aaPredicted RBP11.48□□□□□ -0.57
CACNA1A-219ENST00000635917 ZNF440Q8IYI8 595 aa11.48□□□□□ -0.57
CACNA1A-219ENST00000635917 ANKK1Q8NFD2 765 aa11.48□□□□□ -0.57
CACNA1A-219ENST00000635917 OR2T33Q8NG76 320 aa11.48□□□□□ -0.57
CACNA1A-219ENST00000635917 TCEAL3Q969E4 200 aa11.48□□□□□ -0.57
CACNA1A-219ENST00000635917 SLC38A2Q96QD8 506 aa11.48□□□□□ -0.57
CACNA1A-219ENST00000635917 AKIRIN1Q9H9L7 192 aaPredicted RBP11.48□□□□□ -0.57
CACNA1A-219ENST00000635917 CLEC2DQ9UHP7 191 aa11.48□□□□□ -0.57
CACNA1A-219ENST00000635917 DIMT1Q9UNQ2 313 aaKnown RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms