RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 FABP6P51161 128 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 MEP1AQ16819 746 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 METTL11BQ5VVY1 283 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 TMEM151AQ8N4L1 468 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 ZNF454Q8N9F8 522 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 BEST4Q8NFU0 473 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 OR10X1Q8NGY0 326 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 MIB2Q96AX9 1013 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 TOE1Q96GM8 510 aaKnown RBP5.23□□□□□ -1.57
SCN1A-209ENST00000635750 PHOX2BQ99453 314 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 RNF38Q9H0F5 515 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 MAGIXQ9H6Y5 334 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 WASH4PA8MWX3 477 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 PRICKLE3O43900 615 aaPredicted RBP5.23□□□□□ -1.57
SCN1A-209ENST00000635750 TM4SF1P30408 202 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 RING1Q06587 406 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 ZNF74Q16587 644 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 RNLSQ5VYX0 342 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 LPCAT3Q6P1A2 487 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 CYP4V2Q6ZWL3 525 aaPredicted RBP5.23□□□□□ -1.57
SCN1A-209ENST00000635750 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.23□□□□□ -1.57
SCN1A-209ENST00000635750 CDRT4Q8N9R6 151 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 APOOQ9BUR5 198 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 NIPAL2Q9H841 368 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 GFOD1Q9NXC2 390 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 ZNF337Q9Y3M9 751 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 XRN1Q8IZH2 1706 aaKnown RBP5.23□□□□□ -1.57
SCN1A-209ENST00000635750 TSPAN11A1L157 253 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 NXPH2O95156 264 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 SELEP16581 610 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 DCAF7P61962 342 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 FLI1Q01543 452 aaPredicted RBP5.23□□□□□ -1.57
SCN1A-209ENST00000635750 GALNT2Q10471 571 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 CAMK2BQ13554 666 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 GALEQ14376 348 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 UPP1Q16831 310 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 DEFB110Q30KQ9 67 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 RABL3Q5HYI8 236 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 SHISA6Q6ZSJ9 500 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 TRIM73Q86UV7 250 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 OR8J1Q8NGP2 316 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 SLAMF9Q96A28 289 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 RTP3Q9BQQ7 232 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 TP63Q9H3D4 680 aaPredicted RBP5.23□□□□□ -1.57
SCN1A-209ENST00000635750 SOX17Q9H6I2 414 aaPredicted RBP5.23□□□□□ -1.57
SCN1A-209ENST00000635750 INIPQ9NRY2 104 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 LRIT1Q9P2V4 623 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 SGK494L7N484 410 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 BCAT2O15382 392 aaPredicted RBP5.23□□□□□ -1.57
SCN1A-209ENST00000635750 DENRO43583 198 aaKnown RBP5.23□□□□□ -1.57
SCN1A-209ENST00000635750 RAB3DO95716 219 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 EDN3P14138 238 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 PRKACBP22694 351 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 SRP14P37108 136 aaKnown RBP5.23□□□□□ -1.57
SCN1A-209ENST00000635750 IL13RA1P78552 427 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 DCDP81605 110 aaKnown RBP5.23□□□□□ -1.57
SCN1A-209ENST00000635750 BAXQ07812 192 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 SPHARQ15513 63 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 MSS51Q4VC12 460 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 SLC22A25Q6T423 547 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 C15orf54Q8N8G6 183 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 CLEC4DQ8WXI8 215 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 ASB17Q8WXJ9 295 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 BRI3BPQ8WY22 251 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 GTF2H4Q92759 462 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 ANKRD19PQ9H560 264 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 SCPEP1Q9HB40 452 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 CREBZFQ9NS37 354 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 CPNE7Q9UBL6 633 aa5.23□□□□□ -1.57
SCN1A-209ENST00000635750 LRP5LA4QPB2 252 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 ZNF705GA8MUZ8 300 aaPredicted RBP5.22□□□□□ -1.57
SCN1A-209ENST00000635750 SLC22A5O76082 557 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 APOC3P02656 99 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 NFYAP23511 347 aaPredicted RBP5.22□□□□□ -1.57
SCN1A-209ENST00000635750 P2RY2P41231 377 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 SPINT3P49223 89 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 GATMP50440 423 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 IKZF1Q13422 519 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 HES5Q5TA89 166 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 NAT8LQ8N9F0 302 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 OR5W2Q8NH69 310 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 SLC39A7Q92504 469 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 METTL9Q9H1A3 318 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 OR51E2Q9H255 320 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 ZDHHC7Q9NXF8 308 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 DUSP13Q9UII6 198 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 PCDHA9Q9Y5H5 950 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 A0A0D9SG52 128 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 DCDC2BA2VCK2 349 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 HIDE1A8MVS5 230 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 H0YAE9 185 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 CDK2AP1O14519 115 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 HSPB6O14558 160 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 SLC31A2O15432 143 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 P2RX6O15547 441 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 DNAJB5O75953 348 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 PIGRP01833 764 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 CERS1P27544 350 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 HOXD12P35452 270 aa5.22□□□□□ -1.57
SCN1A-209ENST00000635750 AGFG1P52594 562 aaKnown RBP5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms