RNA–Protein interactions for RNA: ENST00000629179.1

PNKP-223, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 4

Gene PNKP, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-223ENST00000629179 NR2F1P10589 423 aa12.75□□□□□ -0.37
PNKP-223ENST00000629179 ME2P23368 584 aa12.75□□□□□ -0.37
PNKP-223ENST00000629179 SFTPDP35247 375 aa12.75□□□□□ -0.37
PNKP-223ENST00000629179 PGM1P36871 562 aa12.75□□□□□ -0.37
PNKP-223ENST00000629179 KIR2DL2P43627 348 aaPredicted RBP12.75□□□□□ -0.37
PNKP-223ENST00000629179 KIR2DL3P43628 341 aa12.75□□□□□ -0.37
PNKP-223ENST00000629179 SLC6A8P48029 635 aa12.75□□□□□ -0.37
PNKP-223ENST00000629179 SIRPAP78324 504 aa12.75□□□□□ -0.37
PNKP-223ENST00000629179 TXNL4AP83876 142 aaKnown RBP12.75□□□□□ -0.37
PNKP-223ENST00000629179 HPCAP84074 193 aa12.75□□□□□ -0.37
PNKP-223ENST00000629179 CBFBQ13951 182 aa12.75□□□□□ -0.37
PNKP-223ENST00000629179 QPRTQ15274 297 aa12.75□□□□□ -0.37
PNKP-223ENST00000629179 C6orf10Q5SRN2 563 aa12.75□□□□□ -0.37
PNKP-223ENST00000629179 HBMQ6B0K9 141 aa12.75□□□□□ -0.37
PNKP-223ENST00000629179 OR2A2Q6IF42 318 aa12.75□□□□□ -0.37
PNKP-223ENST00000629179 SLC2A7Q6PXP3 512 aa12.75□□□□□ -0.37
PNKP-223ENST00000629179 ESPNLQ6ZVH7 1005 aa12.75□□□□□ -0.37
PNKP-223ENST00000629179 EIF3MQ7L2H7 374 aaKnown RBP12.75□□□□□ -0.37
PNKP-223ENST00000629179 BTLAQ7Z6A9 289 aa12.75□□□□□ -0.37
PNKP-223ENST00000629179 ZZZ3Q8IYH5 903 aa12.75□□□□□ -0.37
PNKP-223ENST00000629179 ATP6V1C2Q8NEY4 427 aa12.75□□□□□ -0.37
PNKP-223ENST00000629179 OR2V1Q8NHB1 315 aa12.75□□□□□ -0.37
PNKP-223ENST00000629179 GTF2H4Q92759 462 aa12.75□□□□□ -0.37
PNKP-223ENST00000629179 OSTF1Q92882 214 aa12.75□□□□□ -0.37
PNKP-223ENST00000629179 STARD4Q96DR4 205 aa12.75□□□□□ -0.37
PNKP-223ENST00000629179 TRNT1Q96Q11 434 aaKnown RBP12.75□□□□□ -0.37
PNKP-223ENST00000629179 RBM24Q9BX46 236 aaKnown RBP12.75□□□□□ -0.37
PNKP-223ENST00000629179 PRRG4Q9BZD6 226 aa12.75□□□□□ -0.37
PNKP-223ENST00000629179 SLC38A1Q9H2H9 487 aa12.75□□□□□ -0.37
PNKP-223ENST00000629179 PIGMQ9H3S5 423 aa12.75□□□□□ -0.37
PNKP-223ENST00000629179 RNF122Q9H9V4 155 aa12.75□□□□□ -0.37
PNKP-223ENST00000629179 TPT1P8Q9HAU6 139 aa12.75□□□□□ -0.37
PNKP-223ENST00000629179 FOXD3Q9UJU5 478 aaPredicted RBP12.75□□□□□ -0.37
PNKP-223ENST00000629179 LIPT1Q9Y234 373 aa12.75□□□□□ -0.37
PNKP-223ENST00000629179 PCDHB14Q9Y5E9 798 aa12.75□□□□□ -0.37
PNKP-223ENST00000629179 EDF1O60869 148 aaKnown RBP12.74□□□□□ -0.37
PNKP-223ENST00000629179 DNAJA2O60884 412 aa12.74□□□□□ -0.37
PNKP-223ENST00000629179 SMNDC1O75940 238 aaKnown RBP eCLIP12.74□□□□□ -0.37
PNKP-223ENST00000629179 NTN1O95631 604 aa12.74□□□□□ -0.37
PNKP-223ENST00000629179 CRHP06850 196 aa12.74□□□□□ -0.37
PNKP-223ENST00000629179 ETFAP13804 333 aa12.74□□□□□ -0.37
PNKP-223ENST00000629179 CD1EP15812 388 aa12.74□□□□□ -0.37
PNKP-223ENST00000629179 ELK4P28324 431 aa12.74□□□□□ -0.37
PNKP-223ENST00000629179 ADH6P28332 368 aa12.74□□□□□ -0.37
PNKP-223ENST00000629179 CRATP43155 626 aa12.74□□□□□ -0.37
PNKP-223ENST00000629179 CPA2P48052 419 aa12.74□□□□□ -0.37
PNKP-223ENST00000629179 SESN3P58005 492 aa12.74□□□□□ -0.37
PNKP-223ENST00000629179 EEF1A1P68104 462 aaKnown RBP12.74□□□□□ -0.37
PNKP-223ENST00000629179 KCNJ10P78508 379 aa12.74□□□□□ -0.37
PNKP-223ENST00000629179 MAPK11Q15759 364 aa12.74□□□□□ -0.37
PNKP-223ENST00000629179 TMEM176BQ3YBM2 270 aaPredicted RBP12.74□□□□□ -0.37
PNKP-223ENST00000629179 SLC25A53Q5H9E4 307 aa12.74□□□□□ -0.37
PNKP-223ENST00000629179 PDSS1Q5T2R2 415 aa12.74□□□□□ -0.37
PNKP-223ENST00000629179 EEF1A1P5Q5VTE0 462 aa12.74□□□□□ -0.37
PNKP-223ENST00000629179 BLOC1S3Q6QNY0 202 aa12.74□□□□□ -0.37
PNKP-223ENST00000629179 LRRC74BQ6ZQY2 392 aa12.74□□□□□ -0.37
PNKP-223ENST00000629179 MRGPRX4Q96LA9 322 aa12.74□□□□□ -0.37
PNKP-223ENST00000629179 KLHL15Q96M94 604 aa12.74□□□□□ -0.37
PNKP-223ENST00000629179 PAIP1Q9H074 479 aaKnown RBP12.74□□□□□ -0.37
PNKP-223ENST00000629179 SLC24A3Q9HC58 644 aa12.74□□□□□ -0.37
PNKP-223ENST00000629179 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.74□□□□□ -0.37
PNKP-223ENST00000629179 CRIM1Q9NZV1 1036 aa12.74□□□□□ -0.37
PNKP-223ENST00000629179 CCDC167Q9P0B6 97 aa12.74□□□□□ -0.37
PNKP-223ENST00000629179 DCTN4Q9UJW0 460 aa12.74□□□□□ -0.37
PNKP-223ENST00000629179 PACSIN3Q9UKS6 424 aa12.74□□□□□ -0.37
PNKP-223ENST00000629179 AGAP5A6NIR3 686 aa12.73□□□□□ -0.37
PNKP-223ENST00000629179 A8MXE2 369 aa12.73□□□□□ -0.37
PNKP-223ENST00000629179 NR5A2O00482 541 aa12.73□□□□□ -0.37
PNKP-223ENST00000629179 SYNGR4O95473 234 aa12.73□□□□□ -0.37
PNKP-223ENST00000629179 PGCP20142 388 aa12.73□□□□□ -0.37
PNKP-223ENST00000629179 RYKP34925 604 aa12.73□□□□□ -0.37
PNKP-223ENST00000629179 CARD18P57730 90 aa12.73□□□□□ -0.37
PNKP-223ENST00000629179 DSTNP60981 165 aa12.73□□□□□ -0.37
PNKP-223ENST00000629179 PLAURQ03405 335 aa12.73□□□□□ -0.37
PNKP-223ENST00000629179 AGKQ53H12 422 aa12.73□□□□□ -0.37
PNKP-223ENST00000629179 KIF18BQ86Y91 864 aa12.73□□□□□ -0.37
PNKP-223ENST00000629179 FAM71CQ8NEG0 241 aa12.73□□□□□ -0.37
PNKP-223ENST00000629179 LINC01560Q8TB33 94 aa12.73□□□□□ -0.37
PNKP-223ENST00000629179 OIT3Q8WWZ8 545 aa12.73□□□□□ -0.37
PNKP-223ENST00000629179 ROBO4Q8WZ75 1007 aa12.73□□□□□ -0.37
PNKP-223ENST00000629179 CNOT9Q92600 299 aaKnown RBP12.73□□□□□ -0.37
PNKP-223ENST00000629179 SPDL1Q96EA4 605 aa12.73□□□□□ -0.37
PNKP-223ENST00000629179 OPN3Q9H1Y3 402 aaPredicted RBP12.73□□□□□ -0.37
PNKP-223ENST00000629179 MTHFD2LQ9H903 347 aaPredicted RBP12.73□□□□□ -0.37
PNKP-223ENST00000629179 NPHS2Q9NP85 383 aa12.73□□□□□ -0.37
PNKP-223ENST00000629179 SLC52A3Q9NQ40 469 aa12.73□□□□□ -0.37
PNKP-223ENST00000629179 PAQR5Q9NXK6 330 aaPredicted RBP12.73□□□□□ -0.37
PNKP-223ENST00000629179 GALNT8Q9NY28 637 aa12.73□□□□□ -0.37
PNKP-223ENST00000629179 SLAMF8Q9P0V8 285 aa12.73□□□□□ -0.37
PNKP-223ENST00000629179 MCTS1Q9ULC4 181 aaKnown RBP12.73□□□□□ -0.37
PNKP-223ENST00000629179 CLEC4AQ9UMR7 237 aa12.73□□□□□ -0.37
PNKP-223ENST00000629179 SLC35A3Q9Y2D2 325 aa12.73□□□□□ -0.37
PNKP-223ENST00000629179 A0A096LPI6 279 aa12.72□□□□□ -0.37
PNKP-223ENST00000629179 TUBAL3A6NHL2 446 aa12.72□□□□□ -0.37
PNKP-223ENST00000629179 CLIC1O00299 241 aa12.72□□□□□ -0.37
PNKP-223ENST00000629179 ETV2O00321 342 aaPredicted RBP12.72□□□□□ -0.37
PNKP-223ENST00000629179 MSTNO14793 375 aa12.72□□□□□ -0.37
PNKP-223ENST00000629179 ADAM11O75078 769 aa12.72□□□□□ -0.37
PNKP-223ENST00000629179 CGAP01215 116 aa12.72□□□□□ -0.37
PNKP-223ENST00000629179 FCGR2AP12318 317 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms