RNA–Protein interactions for RNA: ENST00000628566.2

NR1I3-235, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 5 BASIC

Gene NR1I3, Length 1,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-235ENST00000628566 TNFRSF10DQ9UBN6 386 aa7.06□□□□□ -1.28
NR1I3-235ENST00000628566 MCTS1Q9ULC4 181 aaKnown RBP7.06□□□□□ -1.28
NR1I3-235ENST00000628566 ICAM5Q9UMF0 924 aa7.06□□□□□ -1.28
NR1I3-235ENST00000628566 ZNF337Q9Y3M9 751 aa7.06□□□□□ -1.28
NR1I3-235ENST00000628566 KLF2Q9Y5W3 355 aaPredicted RBP7.06□□□□□ -1.28
NR1I3-235ENST00000628566 TENM4Q6N022 2769 aa7.06□□□□□ -1.28
NR1I3-235ENST00000628566 DSPPQ9NZW4 1301 aa7.05□□□□□ -1.28
NR1I3-235ENST00000628566 RP1L1Q8IWN7 2480 aaPredicted RBP7.05□□□□□ -1.28
NR1I3-235ENST00000628566 TRBV5-3A0A0A0MS03 114 aa7.05□□□□□ -1.28
NR1I3-235ENST00000628566 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.05□□□□□ -1.28
NR1I3-235ENST00000628566 SLC22A20A6NK97 555 aa7.05□□□□□ -1.28
NR1I3-235ENST00000628566 CLCA1A8K7I4 914 aa7.05□□□□□ -1.28
NR1I3-235ENST00000628566 FAAHO00519 579 aa7.05□□□□□ -1.28
NR1I3-235ENST00000628566 EIF1AYO14602 144 aaKnown RBP7.05□□□□□ -1.28
NR1I3-235ENST00000628566 ZNHIT1O43257 154 aa7.05□□□□□ -1.28
NR1I3-235ENST00000628566 GMNNO75496 209 aa7.05□□□□□ -1.28
NR1I3-235ENST00000628566 FAM107AO95990 144 aa7.05□□□□□ -1.28
NR1I3-235ENST00000628566 GLI4P10075 376 aa7.05□□□□□ -1.28
NR1I3-235ENST00000628566 COX4I1P13073 169 aa7.05□□□□□ -1.28
NR1I3-235ENST00000628566 PRKCAP17252 672 aa7.05□□□□□ -1.28
NR1I3-235ENST00000628566 HOXB9P17482 250 aaPredicted RBP7.05□□□□□ -1.28
NR1I3-235ENST00000628566 RPS4Y1P22090 263 aaKnown RBP7.05□□□□□ -1.28
NR1I3-235ENST00000628566 PRDX6P30041 224 aa7.05□□□□□ -1.28
NR1I3-235ENST00000628566 PRKAR1BP31321 381 aa7.05□□□□□ -1.28
NR1I3-235ENST00000628566 RYKP34925 604 aa7.05□□□□□ -1.28
NR1I3-235ENST00000628566 OPRM1P35372 400 aa7.05□□□□□ -1.28
NR1I3-235ENST00000628566 PGM1P36871 562 aa7.05□□□□□ -1.28
NR1I3-235ENST00000628566 APOBEC1P41238 236 aaKnown RBP7.05□□□□□ -1.28
NR1I3-235ENST00000628566 GYS2P54840 703 aa7.05□□□□□ -1.28
NR1I3-235ENST00000628566 NUP107P57740 925 aa7.05□□□□□ -1.28
NR1I3-235ENST00000628566 MTPNP58546 118 aa7.05□□□□□ -1.28
NR1I3-235ENST00000628566 B3GALT5-AS1P59052 145 aa7.05□□□□□ -1.28
NR1I3-235ENST00000628566 MERTKQ12866 999 aa7.05□□□□□ -1.28
NR1I3-235ENST00000628566 FOXF1Q12946 379 aa7.05□□□□□ -1.28
NR1I3-235ENST00000628566 CAPRIN1Q14444 709 aaKnown RBP7.05□□□□□ -1.28
NR1I3-235ENST00000628566 MAPK14Q16539 360 aa7.05□□□□□ -1.28
NR1I3-235ENST00000628566 EMC4Q5J8M3 183 aa7.05□□□□□ -1.28
NR1I3-235ENST00000628566 MRPL2Q5T653 305 aaKnown RBP7.05□□□□□ -1.28
NR1I3-235ENST00000628566 RNF220Q5VTB9 566 aa7.05□□□□□ -1.28
NR1I3-235ENST00000628566 PPP4R4Q6NUP7 873 aa7.05□□□□□ -1.28
NR1I3-235ENST00000628566 CBLN3Q6UW01 205 aa7.05□□□□□ -1.28
NR1I3-235ENST00000628566 GRINAQ7Z429 371 aa7.05□□□□□ -1.28
NR1I3-235ENST00000628566 PATL1Q86TB9 770 aaKnown RBP7.05□□□□□ -1.28
NR1I3-235ENST00000628566 RETREG3Q86VR2 466 aa7.05□□□□□ -1.28
NR1I3-235ENST00000628566 ARMC8Q8IUR7 673 aa7.05□□□□□ -1.28
NR1I3-235ENST00000628566 MCEMP1Q8IX19 187 aa7.05□□□□□ -1.28
NR1I3-235ENST00000628566 LILRA2Q8N149 483 aa7.05□□□□□ -1.28
NR1I3-235ENST00000628566 TNIP2Q8NFZ5 429 aa7.05□□□□□ -1.28
NR1I3-235ENST00000628566 FBXO27Q8NI29 283 aa7.05□□□□□ -1.28
NR1I3-235ENST00000628566 NFKBIDQ8NI38 313 aa7.05□□□□□ -1.28
NR1I3-235ENST00000628566 GPR119Q8TDV5 335 aa7.05□□□□□ -1.28
NR1I3-235ENST00000628566 ITLN2Q8WWU7 325 aaPredicted RBP7.05□□□□□ -1.28
NR1I3-235ENST00000628566 WNT2BQ93097 391 aa7.05□□□□□ -1.28
NR1I3-235ENST00000628566 ZHX1-C8orf76Q96EF9 292 aa7.05□□□□□ -1.28
NR1I3-235ENST00000628566 UCN2Q96RP3 112 aa7.05□□□□□ -1.28
NR1I3-235ENST00000628566 FANCFQ9NPI8 374 aa7.05□□□□□ -1.28
NR1I3-235ENST00000628566 KCNJ16Q9NPI9 418 aa7.05□□□□□ -1.28
NR1I3-235ENST00000628566 ACER3Q9NUN7 267 aa7.05□□□□□ -1.28
NR1I3-235ENST00000628566 NDE1Q9NXR1 346 aa7.05□□□□□ -1.28
NR1I3-235ENST00000628566 ARMCX1Q9P291 453 aa7.05□□□□□ -1.28
NR1I3-235ENST00000628566 RPS6KB2Q9UBS0 482 aa7.05□□□□□ -1.28
NR1I3-235ENST00000628566 ZNF629Q9UEG4 869 aaPredicted RBP7.05□□□□□ -1.28
NR1I3-235ENST00000628566 ZNF443Q9Y2A4 671 aaPredicted RBP7.05□□□□□ -1.28
NR1I3-235ENST00000628566 ZNF175Q9Y473 711 aa7.05□□□□□ -1.28
NR1I3-235ENST00000628566 NUP214P35658 2090 aaPredicted RBP7.05□□□□□ -1.28
NR1I3-235ENST00000628566 HELZ2Q9BYK8 2649 aaKnown RBP7.05□□□□□ -1.28
NR1I3-235ENST00000628566 ZGRF1Q86YA3 2104 aa7.04□□□□□ -1.28
NR1I3-235ENST00000628566 SVILO95425 2214 aa7.04□□□□□ -1.28
NR1I3-235ENST00000628566 PRAMEF27A3QJZ7 478 aa7.04□□□□□ -1.28
NR1I3-235ENST00000628566 CDHR4A6H8M9 788 aa7.04□□□□□ -1.28
NR1I3-235ENST00000628566 MBD3L4A6NDZ8 208 aaPredicted RBP7.04□□□□□ -1.28
NR1I3-235ENST00000628566 MBD3L3A6NE82 208 aaPredicted RBP7.04□□□□□ -1.28
NR1I3-235ENST00000628566 MBD3L5A6NJ08 208 aaPredicted RBP7.04□□□□□ -1.28
NR1I3-235ENST00000628566 PRSS44E7EML9 344 aa7.04□□□□□ -1.28
NR1I3-235ENST00000628566 ADAM10O14672 748 aa7.04□□□□□ -1.28
NR1I3-235ENST00000628566 AIM2O14862 343 aa7.04□□□□□ -1.28
NR1I3-235ENST00000628566 DNAJA2O60884 412 aa7.04□□□□□ -1.28
NR1I3-235ENST00000628566 PLGP00747 810 aaPredicted RBP7.04□□□□□ -1.28
NR1I3-235ENST00000628566 CRHP06850 196 aa7.04□□□□□ -1.28
NR1I3-235ENST00000628566 TMIGD3P0DMS9 266 aaPredicted RBP7.04□□□□□ -1.28
NR1I3-235ENST00000628566 TFPIP10646 304 aa7.04□□□□□ -1.28
NR1I3-235ENST00000628566 CTSSP25774 331 aa7.04□□□□□ -1.28
NR1I3-235ENST00000628566 PCGF2P35227 344 aa7.04□□□□□ -1.28
NR1I3-235ENST00000628566 PEX19P40855 299 aa7.04□□□□□ -1.28
NR1I3-235ENST00000628566 EIF1AXP47813 144 aaKnown RBP7.04□□□□□ -1.28
NR1I3-235ENST00000628566 IDH2P48735 452 aaKnown RBP7.04□□□□□ -1.28
NR1I3-235ENST00000628566 STARP49675 285 aa7.04□□□□□ -1.28
NR1I3-235ENST00000628566 CLK1P49759 484 aaKnown RBP7.04□□□□□ -1.28
NR1I3-235ENST00000628566 NUDT2P50583 147 aa7.04□□□□□ -1.28
NR1I3-235ENST00000628566 RNF144AP50876 292 aaPredicted RBP7.04□□□□□ -1.28
NR1I3-235ENST00000628566 POLR2HP52434 150 aaKnown RBP7.04□□□□□ -1.28
NR1I3-235ENST00000628566 CLDN15P56746 228 aa7.04□□□□□ -1.28
NR1I3-235ENST00000628566 CLDN18P56856 261 aa7.04□□□□□ -1.28
NR1I3-235ENST00000628566 CARD18P57730 90 aa7.04□□□□□ -1.28
NR1I3-235ENST00000628566 SESN3P58005 492 aa7.04□□□□□ -1.28
NR1I3-235ENST00000628566 CSNK2A1P68400 391 aaPredicted RBP7.04□□□□□ -1.28
NR1I3-235ENST00000628566 ADORA2A-AS1P86434 159 aa7.04□□□□□ -1.28
NR1I3-235ENST00000628566 TMEM44Q2T9K0 475 aa7.04□□□□□ -1.28
NR1I3-235ENST00000628566 NDUFAF6Q330K2 333 aa7.04□□□□□ -1.28
NR1I3-235ENST00000628566 SLC25A35Q3KQZ1 300 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms