RNA–Protein interactions for RNA: ENST00000628306.2

CAPNS1-216, Transcript of calpain small subunit 1, humanhuman

TSL 5 BASIC

Gene CAPNS1, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-216ENST00000628306 LDAHQ9H6V9 325 aa21.93■■□□□ 1.1
CAPNS1-216ENST00000628306 ALKBH4Q9NXW9 302 aa21.93■■□□□ 1.1
CAPNS1-216ENST00000628306 CALML5Q9NZT1 146 aa21.93■■□□□ 1.1
CAPNS1-216ENST00000628306 B4GALT7Q9UBV7 327 aa21.93■■□□□ 1.1
CAPNS1-216ENST00000628306 PCDHGB3Q9Y5G1 929 aa21.93■■□□□ 1.1
CAPNS1-216ENST00000628306 KIAA1549Q9HCM3 1950 aa21.92■■□□□ 1.1
CAPNS1-216ENST00000628306 PEX2P28328 305 aa21.92■■□□□ 1.1
CAPNS1-216ENST00000628306 CEACAM8P31997 349 aaPredicted RBP21.92■■□□□ 1.1
CAPNS1-216ENST00000628306 STX4Q12846 297 aa21.92■■□□□ 1.1
CAPNS1-216ENST00000628306 LTB4RQ15722 352 aa21.92■■□□□ 1.1
CAPNS1-216ENST00000628306 MAPK11Q15759 364 aa21.92■■□□□ 1.1
CAPNS1-216ENST00000628306 FLYWCH1Q4VC44 716 aa21.92■■□□□ 1.1
CAPNS1-216ENST00000628306 LRRC23Q53EV4 343 aaPredicted RBP21.92■■□□□ 1.1
CAPNS1-216ENST00000628306 CYBRD1Q53TN4 286 aa21.92■■□□□ 1.1
CAPNS1-216ENST00000628306 LPCAT4Q643R3 524 aa21.92■■□□□ 1.1
CAPNS1-216ENST00000628306 PPP4R4Q6NUP7 873 aa21.92■■□□□ 1.1
CAPNS1-216ENST00000628306 MFSD12Q6NUT3 480 aa21.92■■□□□ 1.1
CAPNS1-216ENST00000628306 CDC73Q6P1J9 531 aa21.92■■□□□ 1.1
CAPNS1-216ENST00000628306 ARMC8Q8IUR7 673 aa21.92■■□□□ 1.1
CAPNS1-216ENST00000628306 FAM86B1Q8N7N1 296 aa21.92■■□□□ 1.1
CAPNS1-216ENST00000628306 OR5L2Q8NGL0 311 aa21.92■■□□□ 1.1
CAPNS1-216ENST00000628306 PMM1Q92871 262 aa21.92■■□□□ 1.1
CAPNS1-216ENST00000628306 RBM18Q96H35 190 aaKnown RBP21.92■■□□□ 1.1
CAPNS1-216ENST00000628306 ACKR4Q9NPB9 350 aa21.92■■□□□ 1.1
CAPNS1-216ENST00000628306 MAT2BQ9NZL9 334 aa21.92■■□□□ 1.1
CAPNS1-216ENST00000628306 CHCHD2Q9Y6H1 151 aaPredicted RBP21.92■■□□□ 1.1
CAPNS1-216ENST00000628306 NINQ8N4C6 2090 aa21.92■■□□□ 1.1
CAPNS1-216ENST00000628306 TMEM229AB2RXF0 380 aa21.91■■□□□ 1.1
CAPNS1-216ENST00000628306 OR12D1P0DN82 309 aa21.91■■□□□ 1.1
CAPNS1-216ENST00000628306 ETS2P15036 469 aa21.91■■□□□ 1.1
CAPNS1-216ENST00000628306 ZNF26P17031 533 aaPredicted RBP21.91■■□□□ 1.1
CAPNS1-216ENST00000628306 DNASE1P24855 282 aa21.91■■□□□ 1.1
CAPNS1-216ENST00000628306 STT3AP46977 705 aa21.91■■□□□ 1.1
CAPNS1-216ENST00000628306 PRKAG1P54619 331 aa21.91■■□□□ 1.1
CAPNS1-216ENST00000628306 LASP1Q14847 261 aaKnown RBP21.91■■□□□ 1.1
CAPNS1-216ENST00000628306 DAZAP2Q15038 168 aaPredicted RBP21.91■■□□□ 1.1
CAPNS1-216ENST00000628306 PAMR1Q6UXH9 720 aa21.91■■□□□ 1.1
CAPNS1-216ENST00000628306 AMIGO2Q86SJ2 522 aa21.91■■□□□ 1.1
CAPNS1-216ENST00000628306 BBS10Q8TAM1 723 aa21.91■■□□□ 1.1
CAPNS1-216ENST00000628306 FAM222BQ8WU58 562 aa21.91■■□□□ 1.1
CAPNS1-216ENST00000628306 XAGE5Q8WWM1 108 aa21.91■■□□□ 1.1
CAPNS1-216ENST00000628306 KAT2AQ92830 837 aa21.91■■□□□ 1.1
CAPNS1-216ENST00000628306 EME1Q96AY2 570 aa21.91■■□□□ 1.1
CAPNS1-216ENST00000628306 TMEM19Q96HH6 336 aa21.91■■□□□ 1.1
CAPNS1-216ENST00000628306 SENP5Q96HI0 755 aaPredicted RBP21.91■■□□□ 1.1
CAPNS1-216ENST00000628306 BTBD9Q96Q07 612 aa21.91■■□□□ 1.1
CAPNS1-216ENST00000628306 TRNT1Q96Q11 434 aaKnown RBP21.91■■□□□ 1.1
CAPNS1-216ENST00000628306 ZNF607Q96SK3 696 aa21.91■■□□□ 1.1
CAPNS1-216ENST00000628306 C9orf16Q9BUW7 83 aa21.91■■□□□ 1.1
CAPNS1-216ENST00000628306 SPATA5L1Q9BVQ7 753 aa21.91■■□□□ 1.1
CAPNS1-216ENST00000628306 BTBD2Q9BX70 525 aa21.91■■□□□ 1.1
CAPNS1-216ENST00000628306 CXorf21Q9HAI6 301 aa21.91■■□□□ 1.1
CAPNS1-216ENST00000628306 ZFP64Q9NPA5 681 aa21.91■■□□□ 1.1
CAPNS1-216ENST00000628306 EXD2Q9NVH0 621 aa21.91■■□□□ 1.1
CAPNS1-216ENST00000628306 DTNAQ9Y4J8 743 aa21.91■■□□□ 1.1
CAPNS1-216ENST00000628306 A0A0G2JPF8 293 aa21.9■■□□□ 1.1
CAPNS1-216ENST00000628306 TTC36A6NLP5 189 aa21.9■■□□□ 1.1
CAPNS1-216ENST00000628306 HNRNPCL2B2RXH8 293 aa21.9■■□□□ 1.1
CAPNS1-216ENST00000628306 HNRNPCL3B7ZW38 293 aa21.9■■□□□ 1.1
CAPNS1-216ENST00000628306 FAM47E-STBD1D6RA91 191 aa21.9■■□□□ 1.1
CAPNS1-216ENST00000628306 SERPINB7O75635 380 aa21.9■■□□□ 1.1
CAPNS1-216ENST00000628306 ZNF682O95780 498 aa21.9■■□□□ 1.1
CAPNS1-216ENST00000628306 GUSBP08236 651 aa21.9■■□□□ 1.1
CAPNS1-216ENST00000628306 HNRNPCL4P0DMR1 293 aa21.9■■□□□ 1.1
CAPNS1-216ENST00000628306 TNNI3P19429 210 aa21.9■■□□□ 1.1
CAPNS1-216ENST00000628306 NT5EP21589 574 aa21.9■■□□□ 1.1
CAPNS1-216ENST00000628306 UQCRC1P31930 480 aa21.9■■□□□ 1.1
CAPNS1-216ENST00000628306 MAP3K8P41279 467 aa21.9■■□□□ 1.1
CAPNS1-216ENST00000628306 CRISP3P54108 245 aa21.9■■□□□ 1.1
CAPNS1-216ENST00000628306 CASP9P55211 416 aa21.9■■□□□ 1.1
CAPNS1-216ENST00000628306 RPS26P62854 115 aaKnown RBP21.9■■□□□ 1.1
CAPNS1-216ENST00000628306 PRAMEF20Q5VT98 475 aa21.9■■□□□ 1.1
CAPNS1-216ENST00000628306 SLC22A10Q63ZE4 541 aa21.9■■□□□ 1.1
CAPNS1-216ENST00000628306 HEPHL1Q6MZM0 1159 aa21.9■■□□□ 1.1
CAPNS1-216ENST00000628306 KRTAP1-3Q8IUG1 177 aa21.9■■□□□ 1.1
CAPNS1-216ENST00000628306 CDRT4Q8N9R6 151 aa21.9■■□□□ 1.1
CAPNS1-216ENST00000628306 NEIL3Q8TAT5 605 aa21.9■■□□□ 1.1
CAPNS1-216ENST00000628306 SPACA9Q96E40 222 aaPredicted RBP21.9■■□□□ 1.1
CAPNS1-216ENST00000628306 TACO1Q9BSH4 297 aaKnown RBP21.9■■□□□ 1.1
CAPNS1-216ENST00000628306 FN1P02751 2386 aaKnown RBP21.9■■□□□ 1.1
CAPNS1-216ENST00000628306 HSPB2A8KAH6 182 aa21.89■■□□□ 1.1
CAPNS1-216ENST00000628306 OR10H2O60403 315 aa21.89■■□□□ 1.1
CAPNS1-216ENST00000628306 COQ9O75208 318 aa21.89■■□□□ 1.1
CAPNS1-216ENST00000628306 ATE1O95260 518 aa21.89■■□□□ 1.1
CAPNS1-216ENST00000628306 ACADSP16219 412 aa21.89■■□□□ 1.1
CAPNS1-216ENST00000628306 HSPA13P48723 471 aa21.89■■□□□ 1.1
CAPNS1-216ENST00000628306 ASCL1P50553 236 aa21.89■■□□□ 1.1
CAPNS1-216ENST00000628306 HSPB2Q16082 182 aa21.89■■□□□ 1.1
CAPNS1-216ENST00000628306 GRAMD1BQ3KR37 738 aa21.89■■□□□ 1.1
CAPNS1-216ENST00000628306 TRMT12Q53H54 448 aaKnown RBP21.89■■□□□ 1.1
CAPNS1-216ENST00000628306 ATAD3BQ5T9A4 648 aa21.89■■□□□ 1.1
CAPNS1-216ENST00000628306 KRT73Q86Y46 540 aa21.89■■□□□ 1.1
CAPNS1-216ENST00000628306 WFDC11Q8NEX6 87 aa21.89■■□□□ 1.1
CAPNS1-216ENST00000628306 FAM110BQ8TC76 370 aa21.89■■□□□ 1.1
CAPNS1-216ENST00000628306 ADAMTS15Q8TE58 950 aa21.89■■□□□ 1.1
CAPNS1-216ENST00000628306 RAB8BQ92930 207 aa21.89■■□□□ 1.1
CAPNS1-216ENST00000628306 RNASE6Q93091 150 aaKnown RBP21.89■■□□□ 1.1
CAPNS1-216ENST00000628306 TAMM41Q96BW9 452 aa21.89■■□□□ 1.1
CAPNS1-216ENST00000628306 HSH2DQ96JZ2 352 aa21.89■■□□□ 1.1
CAPNS1-216ENST00000628306 C7orf34Q96L11 122 aa21.89■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms