RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 PRSS44E7EML9 344 aa12.64□□□□□ -0.39
SNRPA1-216ENST00000626000 ZNHIT1O43257 154 aa12.64□□□□□ -0.39
SNRPA1-216ENST00000626000 SERPINB7O75635 380 aa12.64□□□□□ -0.39
SNRPA1-216ENST00000626000 PABPC4LP0CB38 370 aaKnown RBP12.64□□□□□ -0.39
SNRPA1-216ENST00000626000 UBTFL6P0CB48 400 aaPredicted RBP12.64□□□□□ -0.39
SNRPA1-216ENST00000626000 SLC6A2P23975 617 aa12.64□□□□□ -0.39
SNRPA1-216ENST00000626000 CEACAM8P31997 349 aaPredicted RBP12.64□□□□□ -0.39
SNRPA1-216ENST00000626000 OPRM1P35372 400 aa12.64□□□□□ -0.39
SNRPA1-216ENST00000626000 PGM1P36871 562 aa12.64□□□□□ -0.39
SNRPA1-216ENST00000626000 DLX5P56178 289 aa12.64□□□□□ -0.39
SNRPA1-216ENST00000626000 SRYQ05066 204 aa12.64□□□□□ -0.39
SNRPA1-216ENST00000626000 GTDC1Q4AE62 458 aa12.64□□□□□ -0.39
SNRPA1-216ENST00000626000 DCST1Q5T197 706 aa12.64□□□□□ -0.39
SNRPA1-216ENST00000626000 REEP3Q6NUK4 255 aa12.64□□□□□ -0.39
SNRPA1-216ENST00000626000 C3orf33Q6P1S2 294 aa12.64□□□□□ -0.39
SNRPA1-216ENST00000626000 CBLN3Q6UW01 205 aa12.64□□□□□ -0.39
SNRPA1-216ENST00000626000 DLEU7Q6UYE1 221 aa12.64□□□□□ -0.39
SNRPA1-216ENST00000626000 ZNF550Q7Z398 422 aa12.64□□□□□ -0.39
SNRPA1-216ENST00000626000 P4HA3Q7Z4N8 544 aa12.64□□□□□ -0.39
SNRPA1-216ENST00000626000 ARPINQ7Z6K5 226 aa12.64□□□□□ -0.39
SNRPA1-216ENST00000626000 C11orf65Q8NCR3 313 aa12.64□□□□□ -0.39
SNRPA1-216ENST00000626000 OR52P1PQ8NH57 321 aa12.64□□□□□ -0.39
SNRPA1-216ENST00000626000 RP9Q8TA86 221 aaKnown RBP12.64□□□□□ -0.39
SNRPA1-216ENST00000626000 GPR119Q8TDV5 335 aa12.64□□□□□ -0.39
SNRPA1-216ENST00000626000 TMEM19Q96HH6 336 aa12.64□□□□□ -0.39
SNRPA1-216ENST00000626000 RNF145Q96MT1 663 aa12.64□□□□□ -0.39
SNRPA1-216ENST00000626000 ZNF607Q96SK3 696 aa12.64□□□□□ -0.39
SNRPA1-216ENST00000626000 CGREF1Q99674 301 aa12.64□□□□□ -0.39
SNRPA1-216ENST00000626000 TUBA1CQ9BQE3 449 aa12.64□□□□□ -0.39
SNRPA1-216ENST00000626000 THUMPD3Q9BV44 507 aaKnown RBP12.64□□□□□ -0.39
SNRPA1-216ENST00000626000 SFXN3Q9BWM7 321 aa12.64□□□□□ -0.39
SNRPA1-216ENST00000626000 KCNE5Q9UJ90 142 aa12.64□□□□□ -0.39
SNRPA1-216ENST00000626000 FOXD3Q9UJU5 478 aaPredicted RBP12.64□□□□□ -0.39
SNRPA1-216ENST00000626000 MCTS1Q9ULC4 181 aaKnown RBP12.64□□□□□ -0.39
SNRPA1-216ENST00000626000 ANGPT4Q9Y264 503 aa12.64□□□□□ -0.39
SNRPA1-216ENST00000626000 ZNF337Q9Y3M9 751 aa12.64□□□□□ -0.39
SNRPA1-216ENST00000626000 COL12A1Q99715 3063 aa12.64□□□□□ -0.39
SNRPA1-216ENST00000626000 MAST4O15021 2626 aa12.63□□□□□ -0.39
SNRPA1-216ENST00000626000 A1L4Q6 167 aa12.63□□□□□ -0.39
SNRPA1-216ENST00000626000 PRAMEF27A3QJZ7 478 aa12.63□□□□□ -0.39
SNRPA1-216ENST00000626000 SLC22A20A6NK97 555 aa12.63□□□□□ -0.39
SNRPA1-216ENST00000626000 NDUFAB1O14561 156 aa12.63□□□□□ -0.39
SNRPA1-216ENST00000626000 ADAMDEC1O15204 470 aa12.63□□□□□ -0.39
SNRPA1-216ENST00000626000 GMFGO60234 142 aa12.63□□□□□ -0.39
SNRPA1-216ENST00000626000 CYP7B1O75881 506 aa12.63□□□□□ -0.39
SNRPA1-216ENST00000626000 RCBTB2O95199 551 aa12.63□□□□□ -0.39
SNRPA1-216ENST00000626000 RNF224P0DH78 156 aa12.63□□□□□ -0.39
SNRPA1-216ENST00000626000 ARAFP10398 606 aa12.63□□□□□ -0.39
SNRPA1-216ENST00000626000 PRKCAP17252 672 aa12.63□□□□□ -0.39
SNRPA1-216ENST00000626000 CTSSP25774 331 aa12.63□□□□□ -0.39
SNRPA1-216ENST00000626000 PSMA4P25789 261 aaKnown RBP12.63□□□□□ -0.39
SNRPA1-216ENST00000626000 HTR1EP28566 365 aa12.63□□□□□ -0.39
SNRPA1-216ENST00000626000 APOBEC1P41238 236 aaKnown RBP12.63□□□□□ -0.39
SNRPA1-216ENST00000626000 CLK1P49759 484 aaKnown RBP12.63□□□□□ -0.39
SNRPA1-216ENST00000626000 CDK6Q00534 326 aa12.63□□□□□ -0.39
SNRPA1-216ENST00000626000 QPRTQ15274 297 aa12.63□□□□□ -0.39
SNRPA1-216ENST00000626000 SGCBQ16585 318 aa12.63□□□□□ -0.39
SNRPA1-216ENST00000626000 RUNDC3AQ59EK9 446 aa12.63□□□□□ -0.39
SNRPA1-216ENST00000626000 INTS11Q5TA45 600 aaKnown RBP12.63□□□□□ -0.39
SNRPA1-216ENST00000626000 GTF2IRD2BQ6EKJ0 949 aa12.63□□□□□ -0.39
SNRPA1-216ENST00000626000 GRINAQ7Z429 371 aa12.63□□□□□ -0.39
SNRPA1-216ENST00000626000 SERPINA11Q86U17 422 aa12.63□□□□□ -0.39
SNRPA1-216ENST00000626000 GTF2IRD2Q86UP8 949 aa12.63□□□□□ -0.39
SNRPA1-216ENST00000626000 UBQLNLQ8IYU4 475 aa12.63□□□□□ -0.39
SNRPA1-216ENST00000626000 HIPK4Q8NE63 616 aa12.63□□□□□ -0.39
SNRPA1-216ENST00000626000 OR8J3Q8NGG0 315 aa12.63□□□□□ -0.39
SNRPA1-216ENST00000626000 ZNF563Q8TA94 476 aa12.63□□□□□ -0.39
SNRPA1-216ENST00000626000 KLHL15Q96M94 604 aa12.63□□□□□ -0.39
SNRPA1-216ENST00000626000 CPPED1Q9BRF8 314 aaPredicted RBP12.63□□□□□ -0.39
SNRPA1-216ENST00000626000 GLRX2Q9NS18 164 aa12.63□□□□□ -0.39
SNRPA1-216ENST00000626000 ACER3Q9NUN7 267 aa12.63□□□□□ -0.39
SNRPA1-216ENST00000626000 CLCF1Q9UBD9 225 aa12.63□□□□□ -0.39
SNRPA1-216ENST00000626000 A0A0G2JNJ9 132 aa12.62□□□□□ -0.39
SNRPA1-216ENST00000626000 CDHR4A6H8M9 788 aa12.62□□□□□ -0.39
SNRPA1-216ENST00000626000 CFAP73A6NFT4 308 aa12.62□□□□□ -0.39
SNRPA1-216ENST00000626000 C17orf51A8MQB3 221 aa12.62□□□□□ -0.39
SNRPA1-216ENST00000626000 MRASO14807 208 aa12.62□□□□□ -0.39
SNRPA1-216ENST00000626000 SEC14L5O43304 696 aa12.62□□□□□ -0.39
SNRPA1-216ENST00000626000 PGM3O95394 542 aa12.62□□□□□ -0.39
SNRPA1-216ENST00000626000 SYNGR4O95473 234 aa12.62□□□□□ -0.39
SNRPA1-216ENST00000626000 NTN1O95631 604 aa12.62□□□□□ -0.39
SNRPA1-216ENST00000626000 CLDN1O95832 211 aa12.62□□□□□ -0.39
SNRPA1-216ENST00000626000 TCEA1P23193 301 aaKnown RBP12.62□□□□□ -0.39
SNRPA1-216ENST00000626000 SLC7A1P30825 629 aa12.62□□□□□ -0.39
SNRPA1-216ENST00000626000 PRKAR1BP31321 381 aa12.62□□□□□ -0.39
SNRPA1-216ENST00000626000 STARP49675 285 aa12.62□□□□□ -0.39
SNRPA1-216ENST00000626000 COPZ1P61923 177 aa12.62□□□□□ -0.39
SNRPA1-216ENST00000626000 GNGT1P63211 74 aa12.62□□□□□ -0.39
SNRPA1-216ENST00000626000 FOXF1Q12946 379 aa12.62□□□□□ -0.39
SNRPA1-216ENST00000626000 MAPK14Q16539 360 aa12.62□□□□□ -0.39
SNRPA1-216ENST00000626000 CYP51A1Q16850 503 aa12.62□□□□□ -0.39
SNRPA1-216ENST00000626000 MRPL2Q5T653 305 aaKnown RBP12.62□□□□□ -0.39
SNRPA1-216ENST00000626000 MSRB3Q8IXL7 192 aa12.62□□□□□ -0.39
SNRPA1-216ENST00000626000 LILRA2Q8N149 483 aa12.62□□□□□ -0.39
SNRPA1-216ENST00000626000 OR2V1Q8NHB1 315 aa12.62□□□□□ -0.39
SNRPA1-216ENST00000626000 FBXO27Q8NI29 283 aa12.62□□□□□ -0.39
SNRPA1-216ENST00000626000 SMPDL3BQ92485 455 aa12.62□□□□□ -0.39
SNRPA1-216ENST00000626000 CPNE4Q96A23 557 aaPredicted RBP12.62□□□□□ -0.39
SNRPA1-216ENST00000626000 CMTM5Q96DZ9 223 aa12.62□□□□□ -0.39
SNRPA1-216ENST00000626000 REXO5Q96IC2 774 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms