RNA–Protein interactions for RNA: ENST00000623185.3

LINC00963-216, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 786 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-216ENST00000623185 RYKP34925 604 aa11.3□□□□□ -0.6
LINC00963-216ENST00000623185 APOBEC1P41238 236 aaKnown RBP11.3□□□□□ -0.6
LINC00963-216ENST00000623185 SLC1A3P43003 542 aa11.3□□□□□ -0.6
LINC00963-216ENST00000623185 HTR3AP46098 478 aa11.3□□□□□ -0.6
LINC00963-216ENST00000623185 IDH2P48735 452 aaKnown RBP11.3□□□□□ -0.6
LINC00963-216ENST00000623185 RNF144AP50876 292 aaPredicted RBP11.3□□□□□ -0.6
LINC00963-216ENST00000623185 ZNF136P52737 540 aa11.3□□□□□ -0.6
LINC00963-216ENST00000623185 SESN3P58005 492 aa11.3□□□□□ -0.6
LINC00963-216ENST00000623185 COPZ1P61923 177 aa11.3□□□□□ -0.6
LINC00963-216ENST00000623185 KCNC4Q03721 635 aa11.3□□□□□ -0.6
LINC00963-216ENST00000623185 QPRTQ15274 297 aa11.3□□□□□ -0.6
LINC00963-216ENST00000623185 TOMM20Q15388 145 aa11.3□□□□□ -0.6
LINC00963-216ENST00000623185 TOMM34Q15785 309 aaPredicted RBP11.3□□□□□ -0.6
LINC00963-216ENST00000623185 PLPPR5Q32ZL2 321 aa11.3□□□□□ -0.6
LINC00963-216ENST00000623185 NHSL2Q5HYW2 709 aa11.3□□□□□ -0.6
LINC00963-216ENST00000623185 FKBP9P1Q75LS8 142 aa11.3□□□□□ -0.6
LINC00963-216ENST00000623185 COMTD1Q86VU5 262 aa11.3□□□□□ -0.6
LINC00963-216ENST00000623185 GTPBP8Q8N3Z3 284 aaPredicted RBP11.3□□□□□ -0.6
LINC00963-216ENST00000623185 OR14L1PQ8NHC6 308 aa11.3□□□□□ -0.6
LINC00963-216ENST00000623185 NEIL3Q8TAT5 605 aa11.3□□□□□ -0.6
LINC00963-216ENST00000623185 CPT1CQ8TCG5 803 aa11.3□□□□□ -0.6
LINC00963-216ENST00000623185 TPD52L3Q96J77 140 aa11.3□□□□□ -0.6
LINC00963-216ENST00000623185 GPR137Q96N19 417 aa11.3□□□□□ -0.6
LINC00963-216ENST00000623185 SLX1AQ9BQ83 275 aa11.3□□□□□ -0.6
LINC00963-216ENST00000623185 ZNF559Q9BR84 538 aa11.3□□□□□ -0.6
LINC00963-216ENST00000623185 TRIM2Q9C040 744 aa11.3□□□□□ -0.6
LINC00963-216ENST00000623185 STOML1Q9UBI4 398 aa11.3□□□□□ -0.6
LINC00963-216ENST00000623185 DKKL1Q9UK85 242 aa11.3□□□□□ -0.6
LINC00963-216ENST00000623185 NPIPA1Q9UND3 350 aa11.3□□□□□ -0.6
LINC00963-216ENST00000623185 NINQ8N4C6 2090 aa11.3□□□□□ -0.6
LINC00963-216ENST00000623185 ATMQ13315 3056 aa11.29□□□□□ -0.6
LINC00963-216ENST00000623185 TRGV5A0A0B4J1U4 118 aa11.29□□□□□ -0.6
LINC00963-216ENST00000623185 OR14I1A6ND48 311 aa11.29□□□□□ -0.6
LINC00963-216ENST00000623185 AQP12BA6NM10 295 aa11.29□□□□□ -0.6
LINC00963-216ENST00000623185 CDC40O60508 579 aaKnown RBP eCLIP11.29□□□□□ -0.6
LINC00963-216ENST00000623185 TPST2O60704 377 aa11.29□□□□□ -0.6
LINC00963-216ENST00000623185 WISP2O76076 250 aa11.29□□□□□ -0.6
LINC00963-216ENST00000623185 PRKD3O94806 890 aa11.29□□□□□ -0.6
LINC00963-216ENST00000623185 ZNF682O95780 498 aa11.29□□□□□ -0.6
LINC00963-216ENST00000623185 ACTL6AO96019 429 aa11.29□□□□□ -0.6
LINC00963-216ENST00000623185 CELA3AP09093 270 aa11.29□□□□□ -0.6
LINC00963-216ENST00000623185 UMPSP11172 480 aa11.29□□□□□ -0.6
LINC00963-216ENST00000623185 GP1BBP13224 206 aa11.29□□□□□ -0.6
LINC00963-216ENST00000623185 PRG2P13727 222 aa11.29□□□□□ -0.6
LINC00963-216ENST00000623185 EDN3P14138 238 aa11.29□□□□□ -0.6
LINC00963-216ENST00000623185 PRKCAP17252 672 aa11.29□□□□□ -0.6
LINC00963-216ENST00000623185 HOXB6P17509 224 aaKnown RBP11.29□□□□□ -0.6
LINC00963-216ENST00000623185 PSMA4P25789 261 aaKnown RBP11.29□□□□□ -0.6
LINC00963-216ENST00000623185 GCKP35557 465 aa11.29□□□□□ -0.6
LINC00963-216ENST00000623185 GFRA1P56159 465 aa11.29□□□□□ -0.6
LINC00963-216ENST00000623185 RGS8P57771 180 aaPredicted RBP11.29□□□□□ -0.6
LINC00963-216ENST00000623185 B3GALT5-AS1P59052 145 aa11.29□□□□□ -0.6
LINC00963-216ENST00000623185 BCL2A1Q16548 175 aa11.29□□□□□ -0.6
LINC00963-216ENST00000623185 IFI44LQ53G44 452 aa11.29□□□□□ -0.6
LINC00963-216ENST00000623185 WIPI1Q5MNZ9 446 aaPredicted RBP11.29□□□□□ -0.6
LINC00963-216ENST00000623185 WBP2NLQ6ICG8 309 aa11.29□□□□□ -0.6
LINC00963-216ENST00000623185 ARHGAP11AQ6P4F7 1023 aa11.29□□□□□ -0.6
LINC00963-216ENST00000623185 AAGABQ6PD74 315 aa11.29□□□□□ -0.6
LINC00963-216ENST00000623185 TRILQ7L0X0 811 aa11.29□□□□□ -0.6
LINC00963-216ENST00000623185 GRINAQ7Z429 371 aa11.29□□□□□ -0.6
LINC00963-216ENST00000623185 YRDCQ86U90 279 aaKnown RBP11.29□□□□□ -0.6
LINC00963-216ENST00000623185 RANBP3LQ86VV4 465 aaPredicted RBP11.29□□□□□ -0.6
LINC00963-216ENST00000623185 AQP12AQ8IXF9 295 aa11.29□□□□□ -0.6
LINC00963-216ENST00000623185 GHDCQ8N2G8 530 aa11.29□□□□□ -0.6
LINC00963-216ENST00000623185 TMCO5AQ8N6Q1 288 aa11.29□□□□□ -0.6
LINC00963-216ENST00000623185 OR6T1Q8NGN1 323 aa11.29□□□□□ -0.6
LINC00963-216ENST00000623185 ZNF563Q8TA94 476 aa11.29□□□□□ -0.6
LINC00963-216ENST00000623185 ZNF524Q96C55 264 aa11.29□□□□□ -0.6
LINC00963-216ENST00000623185 LRGUKQ96M69 825 aa11.29□□□□□ -0.6
LINC00963-216ENST00000623185 KLHDC3Q9BQ90 382 aa11.29□□□□□ -0.6
LINC00963-216ENST00000623185 WFDC6Q9BQY6 131 aa11.29□□□□□ -0.6
LINC00963-216ENST00000623185 UGT2B28Q9BY64 529 aa11.29□□□□□ -0.6
LINC00963-216ENST00000623185 TRIM15Q9C019 465 aa11.29□□□□□ -0.6
LINC00963-216ENST00000623185 POLR2J2Q9GZM3 115 aaKnown RBP11.29□□□□□ -0.6
LINC00963-216ENST00000623185 POLR2J3Q9H1A7 115 aaKnown RBP11.29□□□□□ -0.6
LINC00963-216ENST00000623185 LDAHQ9H6V9 325 aa11.29□□□□□ -0.6
LINC00963-216ENST00000623185 TMEM27Q9HBJ8 222 aa11.29□□□□□ -0.6
LINC00963-216ENST00000623185 TESQ9UGI8 421 aaKnown RBP11.29□□□□□ -0.6
LINC00963-216ENST00000623185 EXPH5Q8NEV8 1989 aa11.28□□□□□ -0.6
LINC00963-216ENST00000623185 TCRBV5S2A0A599 114 aa11.28□□□□□ -0.6
LINC00963-216ENST00000623185 AQP7O14520 342 aa11.28□□□□□ -0.6
LINC00963-216ENST00000623185 AP3D1O14617 1153 aa11.28□□□□□ -0.6
LINC00963-216ENST00000623185 GMFGO60234 142 aa11.28□□□□□ -0.6
LINC00963-216ENST00000623185 ZNF17P17021 662 aa11.28□□□□□ -0.6
LINC00963-216ENST00000623185 CCR4P51679 360 aa11.28□□□□□ -0.6
LINC00963-216ENST00000623185 TDGF1P3P51864 188 aa11.28□□□□□ -0.6
LINC00963-216ENST00000623185 MLLT10P55197 1068 aa11.28□□□□□ -0.6
LINC00963-216ENST00000623185 RAC1P63000 192 aa11.28□□□□□ -0.6
LINC00963-216ENST00000623185 COLEC12Q5KU26 742 aa11.28□□□□□ -0.6
LINC00963-216ENST00000623185 VASNQ6EMK4 673 aa11.28□□□□□ -0.6
LINC00963-216ENST00000623185 ZNF613Q6PF04 617 aa11.28□□□□□ -0.6
LINC00963-216ENST00000623185 ULK3Q6PHR2 472 aa11.28□□□□□ -0.6
LINC00963-216ENST00000623185 CYP2R1Q6VVX0 501 aa11.28□□□□□ -0.6
LINC00963-216ENST00000623185 VTCN1Q7Z7D3 282 aa11.28□□□□□ -0.6
LINC00963-216ENST00000623185 CARM1Q86X55 608 aa11.28□□□□□ -0.6
LINC00963-216ENST00000623185 ADGRG3Q86Y34 549 aa11.28□□□□□ -0.6
LINC00963-216ENST00000623185 ZNF843Q8N446 348 aa11.28□□□□□ -0.6
LINC00963-216ENST00000623185 OR4D11Q8NGI4 311 aa11.28□□□□□ -0.6
LINC00963-216ENST00000623185 POC1BQ8TC44 478 aa11.28□□□□□ -0.6
LINC00963-216ENST00000623185 DNAJA4Q8WW22 397 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms