RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 TRIM46Q7Z4K8 759 aa8.4□□□□□ -1.07
HDAC9-229ENST00000622668 GPR141Q7Z602 305 aa8.4□□□□□ -1.07
HDAC9-229ENST00000622668 ANKRD37Q7Z713 158 aa8.4□□□□□ -1.07
HDAC9-229ENST00000622668 MEX3DQ86XN8 651 aaKnown RBP8.4□□□□□ -1.07
HDAC9-229ENST00000622668 FTMTQ8N4E7 242 aa8.4□□□□□ -1.07
HDAC9-229ENST00000622668 OR7G2Q8NG99 324 aa8.4□□□□□ -1.07
HDAC9-229ENST00000622668 OR52E2Q8NGJ4 325 aa8.4□□□□□ -1.07
HDAC9-229ENST00000622668 ASB9Q96DX5 294 aa8.4□□□□□ -1.07
HDAC9-229ENST00000622668 ARSGQ96EG1 525 aa8.4□□□□□ -1.07
HDAC9-229ENST00000622668 TM9SF2Q99805 663 aa8.4□□□□□ -1.07
HDAC9-229ENST00000622668 SH3GL3Q99963 347 aa8.4□□□□□ -1.07
HDAC9-229ENST00000622668 KLHL9Q9P2J3 617 aa8.4□□□□□ -1.07
HDAC9-229ENST00000622668 MYRFQ9Y2G1 1151 aa8.4□□□□□ -1.07
HDAC9-229ENST00000622668 TMED7Q9Y3B3 224 aa8.4□□□□□ -1.07
HDAC9-229ENST00000622668 ETHE1O95571 254 aa8.39□□□□□ -1.07
HDAC9-229ENST00000622668 CSTBP04080 98 aaKnown RBP8.39□□□□□ -1.07
HDAC9-229ENST00000622668 NUDT7P0C024 238 aa8.39□□□□□ -1.07
HDAC9-229ENST00000622668 CD59P13987 128 aa8.39□□□□□ -1.07
HDAC9-229ENST00000622668 FUT4P22083 530 aa8.39□□□□□ -1.07
HDAC9-229ENST00000622668 ETV5P41161 510 aa8.39□□□□□ -1.07
HDAC9-229ENST00000622668 MAP3K8P41279 467 aa8.39□□□□□ -1.07
HDAC9-229ENST00000622668 STARP49675 285 aa8.39□□□□□ -1.07
HDAC9-229ENST00000622668 CLDN15P56746 228 aa8.39□□□□□ -1.07
HDAC9-229ENST00000622668 BNIP1Q12981 228 aa8.39□□□□□ -1.07
HDAC9-229ENST00000622668 LPCAT4Q643R3 524 aa8.39□□□□□ -1.07
HDAC9-229ENST00000622668 FJX1Q86VR8 437 aa8.39□□□□□ -1.07
HDAC9-229ENST00000622668 TMEM200AQ86VY9 491 aa8.39□□□□□ -1.07
HDAC9-229ENST00000622668 PM20D2Q8IYS1 436 aa8.39□□□□□ -1.07
HDAC9-229ENST00000622668 TCEANCQ8N8B7 351 aa8.39□□□□□ -1.07
HDAC9-229ENST00000622668 OR2T33Q8NG76 320 aa8.39□□□□□ -1.07
HDAC9-229ENST00000622668 OR2T11Q8NH01 316 aa8.39□□□□□ -1.07
HDAC9-229ENST00000622668 GNPDA2Q8TDQ7 276 aa8.39□□□□□ -1.07
HDAC9-229ENST00000622668 TMEM239Q8WW34 195 aa8.39□□□□□ -1.07
HDAC9-229ENST00000622668 PIP5K1AQ99755 562 aa8.39□□□□□ -1.07
HDAC9-229ENST00000622668 TXLNGYQ9BZA5 131 aa8.39□□□□□ -1.07
HDAC9-229ENST00000622668 TPK1Q9H3S4 243 aa8.39□□□□□ -1.07
HDAC9-229ENST00000622668 CNIH4Q9P003 139 aa8.39□□□□□ -1.07
HDAC9-229ENST00000622668 C19orf53Q9UNZ5 99 aaPredicted RBP8.39□□□□□ -1.07
HDAC9-229ENST00000622668 WIF1Q9Y5W5 379 aa8.39□□□□□ -1.07
HDAC9-229ENST00000622668 SH3D21A4FU49 640 aa8.39□□□□□ -1.07
HDAC9-229ENST00000622668 UBFD1O14562 309 aaKnown RBP8.39□□□□□ -1.07
HDAC9-229ENST00000622668 SLC43A1O75387 559 aa8.39□□□□□ -1.07
HDAC9-229ENST00000622668 ITGA5P08648 1049 aa8.39□□□□□ -1.07
HDAC9-229ENST00000622668 CA5AP35218 305 aa8.39□□□□□ -1.07
HDAC9-229ENST00000622668 SCN1BQ07699 218 aa8.39□□□□□ -1.07
HDAC9-229ENST00000622668 CAMK2DQ13557 499 aa8.39□□□□□ -1.07
HDAC9-229ENST00000622668 MYBPC3Q14896 1274 aa8.39□□□□□ -1.07
HDAC9-229ENST00000622668 LEG1Q6P5S2 330 aa8.39□□□□□ -1.07
HDAC9-229ENST00000622668 CCDC80Q76M96 950 aa8.39□□□□□ -1.07
HDAC9-229ENST00000622668 PEG10Q86TG7 708 aaKnown RBP8.39□□□□□ -1.07
HDAC9-229ENST00000622668 KDM8Q8N371 416 aa8.39□□□□□ -1.07
HDAC9-229ENST00000622668 SVOPLQ8N434 492 aa8.39□□□□□ -1.07
HDAC9-229ENST00000622668 PRSS33Q8NF86 280 aa8.39□□□□□ -1.07
HDAC9-229ENST00000622668 TESCQ96BS2 214 aa8.39□□□□□ -1.07
HDAC9-229ENST00000622668 ZNF501Q96CX3 271 aaPredicted RBP8.39□□□□□ -1.07
HDAC9-229ENST00000622668 LIN37Q96GY3 246 aaPredicted RBP8.39□□□□□ -1.07
HDAC9-229ENST00000622668 MPP4Q96JB8 637 aa8.39□□□□□ -1.07
HDAC9-229ENST00000622668 SLC41A2Q96JW4 573 aa8.39□□□□□ -1.07
HDAC9-229ENST00000622668 SORT1Q99523 831 aa8.39□□□□□ -1.07
HDAC9-229ENST00000622668 DDA1Q9BW61 102 aa8.39□□□□□ -1.07
HDAC9-229ENST00000622668 CADM1Q9BY67 442 aaKnown RBP8.39□□□□□ -1.07
HDAC9-229ENST00000622668 SEMA4CQ9C0C4 833 aa8.39□□□□□ -1.07
HDAC9-229ENST00000622668 WWTR1Q9GZV5 400 aa8.39□□□□□ -1.07
HDAC9-229ENST00000622668 UCK1Q9HA47 277 aa8.39□□□□□ -1.07
HDAC9-229ENST00000622668 SMPD3Q9NY59 655 aaPredicted RBP8.39□□□□□ -1.07
HDAC9-229ENST00000622668 MYOTQ9UBF9 498 aa8.39□□□□□ -1.07
HDAC9-229ENST00000622668 GLS2Q9UI32 602 aa8.39□□□□□ -1.07
HDAC9-229ENST00000622668 DOPEY2Q9Y3R5 2298 aa8.39□□□□□ -1.07
HDAC9-229ENST00000622668 ZNF670-ZNF695F2Z2N8 137 aa8.39□□□□□ -1.07
HDAC9-229ENST00000622668 PDLIM1O00151 329 aa8.39□□□□□ -1.07
HDAC9-229ENST00000622668 CCL21O00585 134 aa8.39□□□□□ -1.07
HDAC9-229ENST00000622668 EI24O14681 340 aa8.39□□□□□ -1.07
HDAC9-229ENST00000622668 SNNO75324 88 aaPredicted RBP8.39□□□□□ -1.07
HDAC9-229ENST00000622668 F13BP05160 661 aa8.39□□□□□ -1.07
HDAC9-229ENST00000622668 GCAP28676 217 aa8.39□□□□□ -1.07
HDAC9-229ENST00000622668 LSM3P62310 102 aaKnown RBP8.39□□□□□ -1.07
HDAC9-229ENST00000622668 TIMM50Q3ZCQ8 353 aa8.39□□□□□ -1.07
HDAC9-229ENST00000622668 SLC27A4Q6P1M0 643 aa8.39□□□□□ -1.07
HDAC9-229ENST00000622668 TRILQ7L0X0 811 aa8.39□□□□□ -1.07
HDAC9-229ENST00000622668 SLC16A14Q7RTX9 510 aa8.39□□□□□ -1.07
HDAC9-229ENST00000622668 TIGD4Q8IY51 512 aa8.39□□□□□ -1.07
HDAC9-229ENST00000622668 DNAJC22Q8N4W6 341 aa8.39□□□□□ -1.07
HDAC9-229ENST00000622668 CYB561A3Q8NBI2 242 aa8.39□□□□□ -1.07
HDAC9-229ENST00000622668 SETD6Q8TBK2 473 aa8.39□□□□□ -1.07
HDAC9-229ENST00000622668 MROQ9BYG7 248 aa8.39□□□□□ -1.07
HDAC9-229ENST00000622668 MGAT4BQ9UQ53 548 aa8.39□□□□□ -1.07
HDAC9-229ENST00000622668 ZNF443Q9Y2A4 671 aaPredicted RBP8.39□□□□□ -1.07
HDAC9-229ENST00000622668 GPR45Q9Y5Y3 372 aa8.39□□□□□ -1.07
HDAC9-229ENST00000622668 SLC22A20A6NK97 555 aa8.38□□□□□ -1.07
HDAC9-229ENST00000622668 OR6C76A6NM76 312 aa8.38□□□□□ -1.07
HDAC9-229ENST00000622668 ZNF208O43345 1280 aa8.38□□□□□ -1.07
HDAC9-229ENST00000622668 EIF1BO60739 113 aaKnown RBP8.38□□□□□ -1.07
HDAC9-229ENST00000622668 RBMXL2O75526 392 aaKnown RBP8.38□□□□□ -1.07
HDAC9-229ENST00000622668 CBR3O75828 277 aa8.38□□□□□ -1.07
HDAC9-229ENST00000622668 NDUFB2O95178 105 aa8.38□□□□□ -1.07
HDAC9-229ENST00000622668 HPP00738 406 aa8.38□□□□□ -1.07
HDAC9-229ENST00000622668 IGLV3-19P01714 112 aa8.38□□□□□ -1.07
HDAC9-229ENST00000622668 HCKP08631 526 aa8.38□□□□□ -1.07
HDAC9-229ENST00000622668 BSGP35613 385 aa8.38□□□□□ -1.07
HDAC9-229ENST00000622668 OMPP47874 163 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms