RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 DBX2Q6ZNG2 339 aa16.15■□□□□ 0.18
FAM3A-222ENST00000621967 NAXDQ8IW45 347 aa16.15■□□□□ 0.18
FAM3A-222ENST00000621967 KLHL36Q8N4N3 616 aa16.15■□□□□ 0.18
FAM3A-222ENST00000621967 PSD4Q8NDX1 1056 aa16.15■□□□□ 0.18
FAM3A-222ENST00000621967 OR2T33Q8NG76 320 aa16.15■□□□□ 0.18
FAM3A-222ENST00000621967 OR4K14Q8NGD5 310 aa16.15■□□□□ 0.18
FAM3A-222ENST00000621967 OR10G6Q8NH81 332 aa16.15■□□□□ 0.18
FAM3A-222ENST00000621967 NAT6Q93015 286 aa16.15■□□□□ 0.18
FAM3A-222ENST00000621967 SLC22A18Q96BI1 424 aa16.15■□□□□ 0.18
FAM3A-222ENST00000621967 SOSTQ9BQB4 213 aa16.15■□□□□ 0.18
FAM3A-222ENST00000621967 PTGFRNQ9P2B2 879 aa16.15■□□□□ 0.18
FAM3A-222ENST00000621967 ZNF232Q9UNY5 417 aa16.15■□□□□ 0.18
FAM3A-222ENST00000621967 RIF1Q5UIP0 2472 aaKnown RBP16.15■□□□□ 0.18
FAM3A-222ENST00000621967 FAM221BA6H8Z2 402 aa16.15■□□□□ 0.18
FAM3A-222ENST00000621967 J3QRE1 110 aa16.15■□□□□ 0.18
FAM3A-222ENST00000621967 CDC42EP2O14613 210 aa16.15■□□□□ 0.18
FAM3A-222ENST00000621967 RGS13O14921 159 aa16.15■□□□□ 0.18
FAM3A-222ENST00000621967 CHST10O43529 356 aa16.15■□□□□ 0.18
FAM3A-222ENST00000621967 GDF9O60383 454 aa16.15■□□□□ 0.18
FAM3A-222ENST00000621967 TMCC2O75069 709 aa16.15■□□□□ 0.18
FAM3A-222ENST00000621967 HLA-DQB1P01920 261 aa16.15■□□□□ 0.18
FAM3A-222ENST00000621967 HMGN1P05114 100 aa16.15■□□□□ 0.18
FAM3A-222ENST00000621967 KRT8P05787 483 aa16.15■□□□□ 0.18
FAM3A-222ENST00000621967 CD59P13987 128 aa16.15■□□□□ 0.18
FAM3A-222ENST00000621967 RPS4Y1P22090 263 aaKnown RBP16.15■□□□□ 0.18
FAM3A-222ENST00000621967 DDOSTP39656 456 aa16.15■□□□□ 0.18
FAM3A-222ENST00000621967 DUSP3P51452 185 aaPredicted RBP16.15■□□□□ 0.18
FAM3A-222ENST00000621967 COL9A2Q14055 689 aaPredicted RBP16.15■□□□□ 0.18
FAM3A-222ENST00000621967 TAB1Q15750 504 aa16.15■□□□□ 0.18
FAM3A-222ENST00000621967 DUSP5Q16690 384 aa16.15■□□□□ 0.18
FAM3A-222ENST00000621967 EIPR1Q53HC9 387 aa16.15■□□□□ 0.18
FAM3A-222ENST00000621967 USP53Q70EK8 1073 aa16.15■□□□□ 0.18
FAM3A-222ENST00000621967 RDH10Q8IZV5 341 aa16.15■□□□□ 0.18
FAM3A-222ENST00000621967 ZFP41Q8N8Y5 198 aa16.15■□□□□ 0.18
FAM3A-222ENST00000621967 BBS1Q8NFJ9 593 aa16.15■□□□□ 0.18
FAM3A-222ENST00000621967 CCDC74AQ96AQ1 378 aa16.15■□□□□ 0.18
FAM3A-222ENST00000621967 OR2A5Q96R48 311 aa16.15■□□□□ 0.18
FAM3A-222ENST00000621967 PRSS27Q9BQR3 290 aa16.15■□□□□ 0.18
FAM3A-222ENST00000621967 HINT3Q9NQE9 182 aaKnown RBP16.15■□□□□ 0.18
FAM3A-222ENST00000621967 ASB6Q9NWX5 421 aa16.15■□□□□ 0.18
FAM3A-222ENST00000621967 SLC7A7Q9UM01 511 aa16.15■□□□□ 0.18
FAM3A-222ENST00000621967 POLHQ9Y253 713 aa16.15■□□□□ 0.18
FAM3A-222ENST00000621967 RBMX2Q9Y388 322 aaKnown RBP16.15■□□□□ 0.18
FAM3A-222ENST00000621967 ASCC3Q8N3C0 2202 aaKnown RBP16.14■□□□□ 0.17
FAM3A-222ENST00000621967 MEIOCA2RUB1 952 aa16.14■□□□□ 0.17
FAM3A-222ENST00000621967 TNFSF14O43557 240 aa16.14■□□□□ 0.17
FAM3A-222ENST00000621967 HLA-DPB1P04440 258 aa16.14■□□□□ 0.17
FAM3A-222ENST00000621967 GALP22466 123 aa16.14■□□□□ 0.17
FAM3A-222ENST00000621967 RUNX2Q13950 521 aa16.14■□□□□ 0.17
FAM3A-222ENST00000621967 SF3B4Q15427 424 aaKnown RBP eCLIP16.14■□□□□ 0.171e-6■■■■□ 19.5
FAM3A-222ENST00000621967 SLC35F1Q5T1Q4 408 aa16.14■□□□□ 0.17
FAM3A-222ENST00000621967 PDZK1Q5T2W1 519 aa16.14■□□□□ 0.17
FAM3A-222ENST00000621967 VASNQ6EMK4 673 aa16.14■□□□□ 0.17
FAM3A-222ENST00000621967 GUSBP11Q6P575 273 aa16.14■□□□□ 0.17
FAM3A-222ENST00000621967 OOSP2Q86WS3 158 aa16.14■□□□□ 0.17
FAM3A-222ENST00000621967 SIMC1Q8NDZ2 872 aa16.14■□□□□ 0.17
FAM3A-222ENST00000621967 BRIX1Q8TDN6 353 aaKnown RBP16.14■□□□□ 0.17
FAM3A-222ENST00000621967 ST6GAL2Q96JF0 529 aa16.14■□□□□ 0.17
FAM3A-222ENST00000621967 DCLRE1CQ96SD1 692 aaKnown RBP16.14■□□□□ 0.17
FAM3A-222ENST00000621967 SDF2Q99470 211 aa16.14■□□□□ 0.17
FAM3A-222ENST00000621967 ZNF350Q9GZX5 532 aa16.14■□□□□ 0.17
FAM3A-222ENST00000621967 C11orf54Q9H0W9 315 aaPredicted RBP16.14■□□□□ 0.17
FAM3A-222ENST00000621967 KRCC1Q9NPI7 259 aaPredicted RBP16.14■□□□□ 0.17
FAM3A-222ENST00000621967 ZNF223Q9UK11 482 aaPredicted RBP16.14■□□□□ 0.17
FAM3A-222ENST00000621967 DAPP1Q9UN19 280 aa16.14■□□□□ 0.17
FAM3A-222ENST00000621967 LY6G6EA0A0G2JKS1 128 aa16.13■□□□□ 0.17
FAM3A-222ENST00000621967 CENPVL1A0A0U1RR11 272 aa16.13■□□□□ 0.17
FAM3A-222ENST00000621967 OR6C74A6NCV1 312 aa16.13■□□□□ 0.17
FAM3A-222ENST00000621967 P2RX6O15547 441 aa16.13■□□□□ 0.17
FAM3A-222ENST00000621967 SLC2A10O95528 541 aa16.13■□□□□ 0.17
FAM3A-222ENST00000621967 LDOC1O95751 146 aaPredicted RBP16.13■□□□□ 0.17
FAM3A-222ENST00000621967 ZGLP1P0C6A0 271 aa16.13■□□□□ 0.17
FAM3A-222ENST00000621967 TYRP1P17643 537 aa16.13■□□□□ 0.17
FAM3A-222ENST00000621967 GPR3P46089 330 aa16.13■□□□□ 0.17
FAM3A-222ENST00000621967 EPHA4P54764 986 aa16.13■□□□□ 0.17
FAM3A-222ENST00000621967 KIR2DS3Q14952 304 aa16.13■□□□□ 0.17
FAM3A-222ENST00000621967 FHL5Q5TD97 284 aa16.13■□□□□ 0.17
FAM3A-222ENST00000621967 STPG1Q5TH74 334 aa16.13■□□□□ 0.17
FAM3A-222ENST00000621967 METAP1DQ6UB28 335 aaPredicted RBP16.13■□□□□ 0.17
FAM3A-222ENST00000621967 ZNF438Q7Z4V0 828 aa16.13■□□□□ 0.17
FAM3A-222ENST00000621967 Q8N9G6 341 aaPredicted RBP16.13■□□□□ 0.17
FAM3A-222ENST00000621967 DNAJA4Q8WW22 397 aaPredicted RBP16.13■□□□□ 0.17
FAM3A-222ENST00000621967 TP53INP1Q96A56 240 aa16.13■□□□□ 0.17
FAM3A-222ENST00000621967 COL26A1Q96A83 441 aa16.13■□□□□ 0.17
FAM3A-222ENST00000621967 AHCYL2Q96HN2 611 aaKnown RBP16.13■□□□□ 0.17
FAM3A-222ENST00000621967 SAMD8Q96LT4 415 aa16.13■□□□□ 0.17
FAM3A-222ENST00000621967 OR2B2Q9GZK3 357 aa16.13■□□□□ 0.17
FAM3A-222ENST00000621967 UBQLN3Q9H347 655 aa16.13■□□□□ 0.17
FAM3A-222ENST00000621967 PIGUQ9H490 435 aa16.13■□□□□ 0.17
FAM3A-222ENST00000621967 HRASLS2Q9NWW9 162 aa16.13■□□□□ 0.17
FAM3A-222ENST00000621967 N6AMT1Q9Y5N5 214 aa16.13■□□□□ 0.17
FAM3A-222ENST00000621967 U3KQA8 63 aa16.13■□□□□ 0.17
FAM3A-222ENST00000621967 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.13■□□□□ 0.17
FAM3A-222ENST00000621967 SMIM30A4D0T7 59 aa16.13■□□□□ 0.17
FAM3A-222ENST00000621967 GABRPO00591 440 aa16.13■□□□□ 0.17
FAM3A-222ENST00000621967 CASKO14936 926 aa16.13■□□□□ 0.17
FAM3A-222ENST00000621967 CPMP14384 443 aa16.13■□□□□ 0.17
FAM3A-222ENST00000621967 PTBP1P26599 531 aaKnown RBP eCLIP16.13■□□□□ 0.17
FAM3A-222ENST00000621967 GCGRP47871 477 aa16.13■□□□□ 0.17
FAM3A-222ENST00000621967 CAV3P56539 151 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms