RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 TSPYL5Q86VY4 417 aaPredicted RBP8.61□□□□□ -1.03
GGA3-223ENST00000621870 FOXRED2Q8IWF2 684 aa8.61□□□□□ -1.03
GGA3-223ENST00000621870 TOMM5Q8N4H5 51 aa8.61□□□□□ -1.03
GGA3-223ENST00000621870 ZNF565Q8N9K5 539 aa8.61□□□□□ -1.03
GGA3-223ENST00000621870 SMRP1Q8NCR6 262 aa8.61□□□□□ -1.03
GGA3-223ENST00000621870 OR9K2Q8NGE7 335 aa8.61□□□□□ -1.03
GGA3-223ENST00000621870 NINJ1Q92982 152 aa8.61□□□□□ -1.03
GGA3-223ENST00000621870 LRRC61Q9BV99 259 aa8.61□□□□□ -1.03
GGA3-223ENST00000621870 CHIAQ9BZP6 476 aa8.61□□□□□ -1.03
GGA3-223ENST00000621870 OR52D1Q9H346 318 aa8.61□□□□□ -1.03
GGA3-223ENST00000621870 PIGUQ9H490 435 aa8.61□□□□□ -1.03
GGA3-223ENST00000621870 ZNF701Q9NV72 531 aaPredicted RBP8.61□□□□□ -1.03
GGA3-223ENST00000621870 TMEM45AQ9NWC5 275 aa8.61□□□□□ -1.03
GGA3-223ENST00000621870 BAIAP2Q9UQB8 552 aa8.61□□□□□ -1.03
GGA3-223ENST00000621870 ZNF443Q9Y2A4 671 aaPredicted RBP8.61□□□□□ -1.03
GGA3-223ENST00000621870 OR51B4Q9Y5P0 310 aa8.61□□□□□ -1.03
GGA3-223ENST00000621870 ABCA7Q8IZY2 2146 aa8.61□□□□□ -1.03
GGA3-223ENST00000621870 KDM4EB2RXH2 506 aaPredicted RBP8.61□□□□□ -1.03
GGA3-223ENST00000621870 MEN1O00255 615 aa8.61□□□□□ -1.03
GGA3-223ENST00000621870 PEX11BO96011 259 aa8.61□□□□□ -1.03
GGA3-223ENST00000621870 MAS1P04201 325 aa8.61□□□□□ -1.03
GGA3-223ENST00000621870 CISD3P0C7P0 127 aa8.61□□□□□ -1.03
GGA3-223ENST00000621870 ZNF35P13682 527 aa8.61□□□□□ -1.03
GGA3-223ENST00000621870 IL32P24001 234 aa8.61□□□□□ -1.03
GGA3-223ENST00000621870 FXYD6P3P58550 94 aa8.61□□□□□ -1.03
GGA3-223ENST00000621870 SEC23BQ15437 767 aa8.61□□□□□ -1.03
GGA3-223ENST00000621870 TMEM178AQ8NBL3 297 aa8.61□□□□□ -1.03
GGA3-223ENST00000621870 OR2A1Q8NGT9 310 aa8.61□□□□□ -1.03
GGA3-223ENST00000621870 ITFG2Q969R8 447 aa8.61□□□□□ -1.03
GGA3-223ENST00000621870 NEDD4LQ96PU5 975 aa8.61□□□□□ -1.03
GGA3-223ENST00000621870 TUBB1Q9H4B7 451 aa8.61□□□□□ -1.03
GGA3-223ENST00000621870 FOLH1BQ9HBA9 442 aa8.61□□□□□ -1.03
GGA3-223ENST00000621870 ZNF160Q9HCG1 818 aa8.61□□□□□ -1.03
GGA3-223ENST00000621870 GRXCR2A6NFK2 248 aa8.61□□□□□ -1.03
GGA3-223ENST00000621870 FAM166BA8MTA8 275 aa8.61□□□□□ -1.03
GGA3-223ENST00000621870 TMPRSS11DO60235 418 aa8.61□□□□□ -1.03
GGA3-223ENST00000621870 LIM2P55344 173 aa8.61□□□□□ -1.03
GGA3-223ENST00000621870 C17orf67Q0P5P2 114 aa8.61□□□□□ -1.03
GGA3-223ENST00000621870 ELAVL1Q15717 326 aaKnown RBP8.61□□□□□ -1.03
GGA3-223ENST00000621870 NDUFA5Q16718 116 aa8.61□□□□□ -1.03
GGA3-223ENST00000621870 LEXMQ3ZCV2 418 aa8.61□□□□□ -1.03
GGA3-223ENST00000621870 PRSS36Q5K4E3 855 aa8.61□□□□□ -1.03
GGA3-223ENST00000621870 SLC6A19Q695T7 634 aa8.61□□□□□ -1.03
GGA3-223ENST00000621870 ZNF782Q6ZMW2 699 aaPredicted RBP8.61□□□□□ -1.03
GGA3-223ENST00000621870 BAHD1Q8TBE0 780 aaPredicted RBP8.61□□□□□ -1.03
GGA3-223ENST00000621870 HOXB13Q92826 284 aaPredicted RBP8.61□□□□□ -1.03
GGA3-223ENST00000621870 TSLPQ969D9 159 aa8.61□□□□□ -1.03
GGA3-223ENST00000621870 BEX2Q9BXY8 128 aa8.61□□□□□ -1.03
GGA3-223ENST00000621870 CHST8Q9H2A9 424 aa8.61□□□□□ -1.03
GGA3-223ENST00000621870 CHRDQ9H2X0 955 aa8.61□□□□□ -1.03
GGA3-223ENST00000621870 BEX1Q9HBH7 125 aa8.61□□□□□ -1.03
GGA3-223ENST00000621870 LAMB1P07942 1786 aa8.61□□□□□ -1.03
GGA3-223ENST00000621870 A0A1W2PR48 441 aa8.6□□□□□ -1.03
GGA3-223ENST00000621870 SERINC4A6NH21 518 aa8.6□□□□□ -1.03
GGA3-223ENST00000621870 J3KTA2 159 aa8.6□□□□□ -1.03
GGA3-223ENST00000621870 PCDH17O14917 1159 aa8.6□□□□□ -1.03
GGA3-223ENST00000621870 PPM1DO15297 605 aa8.6□□□□□ -1.03
GGA3-223ENST00000621870 ORC5O43913 435 aa8.6□□□□□ -1.03
GGA3-223ENST00000621870 HPRP00739 348 aa8.6□□□□□ -1.03
GGA3-223ENST00000621870 ZNF182P17025 639 aaPredicted RBP8.6□□□□□ -1.03
GGA3-223ENST00000621870 DAP3P51398 398 aaKnown RBP8.6□□□□□ -1.03
GGA3-223ENST00000621870 BTG2P78543 158 aa8.6□□□□□ -1.03
GGA3-223ENST00000621870 ZNF404Q494X3 552 aa8.6□□□□□ -1.03
GGA3-223ENST00000621870 FRMPD2BQ6IN97 320 aa8.6□□□□□ -1.03
GGA3-223ENST00000621870 CBLL1Q75N03 491 aa8.6□□□□□ -1.03
GGA3-223ENST00000621870 MRPL21Q7Z2W9 205 aaKnown RBP8.6□□□□□ -1.03
GGA3-223ENST00000621870 PAQR7Q86WK9 346 aa8.6□□□□□ -1.03
GGA3-223ENST00000621870 CHTF18Q8WVB6 975 aa8.6□□□□□ -1.03
GGA3-223ENST00000621870 ZNF597Q96LX8 424 aa8.6□□□□□ -1.03
GGA3-223ENST00000621870 GPR78Q96P69 363 aa8.6□□□□□ -1.03
GGA3-223ENST00000621870 WACQ9BTA9 647 aa8.6□□□□□ -1.03
GGA3-223ENST00000621870 PRR14Q9BWN1 585 aa8.6□□□□□ -1.03
GGA3-223ENST00000621870 TEX101Q9BY14 249 aa8.6□□□□□ -1.03
GGA3-223ENST00000621870 TSPAN10Q9H1Z9 355 aaPredicted RBP8.6□□□□□ -1.03
GGA3-223ENST00000621870 PTTG2Q9NZH5 202 aa8.6□□□□□ -1.03
GGA3-223ENST00000621870 STOML2Q9UJZ1 356 aa8.6□□□□□ -1.03
GGA3-223ENST00000621870 FBP2O00757 339 aa8.6□□□□□ -1.03
GGA3-223ENST00000621870 UTS2O95399 124 aa8.6□□□□□ -1.03
GGA3-223ENST00000621870 IRF2P14316 349 aa8.6□□□□□ -1.03
GGA3-223ENST00000621870 THBS2P35442 1172 aa8.6□□□□□ -1.03
GGA3-223ENST00000621870 HERV-K104P61576 105 aa8.6□□□□□ -1.03
GGA3-223ENST00000621870 POU4F2Q12837 409 aa8.6□□□□□ -1.03
GGA3-223ENST00000621870 VHLLQ6RSH7 139 aa8.6□□□□□ -1.03
GGA3-223ENST00000621870 DEFB124Q8NES8 71 aa8.6□□□□□ -1.03
GGA3-223ENST00000621870 ARL5BQ96KC2 179 aa8.6□□□□□ -1.03
GGA3-223ENST00000621870 URM1Q9BTM9 101 aaKnown RBP8.6□□□□□ -1.03
GGA3-223ENST00000621870 NXF5Q9H1B4 397 aaKnown RBP8.6□□□□□ -1.03
GGA3-223ENST00000621870 ZNF442Q9H7R0 627 aa8.6□□□□□ -1.03
GGA3-223ENST00000621870 MED11Q9P086 117 aa8.6□□□□□ -1.03
GGA3-223ENST00000621870 AASSQ9UDR5 926 aa8.6□□□□□ -1.03
GGA3-223ENST00000621870 KIAA1551Q9HCM1 1747 aa8.6□□□□□ -1.03
GGA3-223ENST00000621870 SHANK3Q9BYB0 1731 aa8.6□□□□□ -1.03
GGA3-223ENST00000621870 C5orf67F2Z3F1 127 aa8.6□□□□□ -1.03
GGA3-223ENST00000621870 KLRC4-KLRK1H3BQV0 150 aa8.6□□□□□ -1.03
GGA3-223ENST00000621870 SLC1A7O00341 560 aa8.6□□□□□ -1.03
GGA3-223ENST00000621870 FGF17O60258 216 aa8.6□□□□□ -1.03
GGA3-223ENST00000621870 RAD51DO75771 328 aa8.6□□□□□ -1.03
GGA3-223ENST00000621870 ZNF432O94892 652 aa8.6□□□□□ -1.03
GGA3-223ENST00000621870 GCH1P30793 250 aa8.6□□□□□ -1.03
GGA3-223ENST00000621870 DRD3P35462 400 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms