RNA–Protein interactions for RNA: ENST00000620197.4

SKP2-209, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2 BASIC

Gene SKP2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-209ENST00000620197 CDS1Q92903 461 aa12.12□□□□□ -0.47
SKP2-209ENST00000620197 GFI1Q99684 422 aa12.12□□□□□ -0.47
SKP2-209ENST00000620197 HDHD2Q9H0R4 259 aa12.12□□□□□ -0.47
SKP2-209ENST00000620197 ABRACLQ9P1F3 81 aa12.12□□□□□ -0.47
SKP2-209ENST00000620197 PRELID1Q9Y255 219 aa12.12□□□□□ -0.47
SKP2-209ENST00000620197 LRP4O75096 1905 aa12.11□□□□□ -0.47
SKP2-209ENST00000620197 TEX13CA0A0J9YWL9 993 aa12.11□□□□□ -0.47
SKP2-209ENST00000620197 SLC22A31A6NKX4 558 aa12.11□□□□□ -0.47
SKP2-209ENST00000620197 C8orf89P0DMQ9 161 aa12.11□□□□□ -0.47
SKP2-209ENST00000620197 NT5EP21589 574 aa12.11□□□□□ -0.47
SKP2-209ENST00000620197 RGS8P57771 180 aaPredicted RBP12.11□□□□□ -0.47
SKP2-209ENST00000620197 DGCR2P98153 550 aa12.11□□□□□ -0.47
SKP2-209ENST00000620197 COL9A2Q14055 689 aaPredicted RBP12.11□□□□□ -0.47
SKP2-209ENST00000620197 MAPK14Q16539 360 aa12.11□□□□□ -0.47
SKP2-209ENST00000620197 BAIAP2L2Q6UXY1 529 aa12.11□□□□□ -0.47
SKP2-209ENST00000620197 LSRQ86X29 649 aaPredicted RBP12.11□□□□□ -0.47
SKP2-209ENST00000620197 LRRC17Q8N6Y2 441 aa12.11□□□□□ -0.47
SKP2-209ENST00000620197 OR4D9Q8NGE8 314 aa12.11□□□□□ -0.47
SKP2-209ENST00000620197 NT5CQ8TCD5 201 aa12.11□□□□□ -0.47
SKP2-209ENST00000620197 SMIM4Q8WVI0 70 aa12.11□□□□□ -0.47
SKP2-209ENST00000620197 RAB11FIP5Q9BXF6 653 aa12.11□□□□□ -0.47
SKP2-209ENST00000620197 LYARQ9NX58 379 aaKnown RBP12.11□□□□□ -0.47
SKP2-209ENST00000620197 CAMK2AQ9UQM7 478 aa12.11□□□□□ -0.47
SKP2-209ENST00000620197 TRAPPC13A5PLN9 417 aa12.11□□□□□ -0.47
SKP2-209ENST00000620197 ANTXRLA6NF34 631 aa12.11□□□□□ -0.47
SKP2-209ENST00000620197 ZNF593O00488 134 aaPredicted RBP12.11□□□□□ -0.47
SKP2-209ENST00000620197 ERAL1O75616 437 aaKnown RBP12.11□□□□□ -0.47
SKP2-209ENST00000620197 TGM6O95932 706 aa12.11□□□□□ -0.47
SKP2-209ENST00000620197 PEPDP12955 493 aa12.11□□□□□ -0.47
SKP2-209ENST00000620197 NAGAP17050 411 aa12.11□□□□□ -0.47
SKP2-209ENST00000620197 CEBPBP17676 345 aa12.11□□□□□ -0.47
SKP2-209ENST00000620197 ITGB8P26012 769 aa12.11□□□□□ -0.47
SKP2-209ENST00000620197 PUDPQ08623 228 aa12.11□□□□□ -0.47
SKP2-209ENST00000620197 FAAH2Q6GMR7 532 aa12.11□□□□□ -0.47
SKP2-209ENST00000620197 SZRD1Q7Z422 152 aa12.11□□□□□ -0.47
SKP2-209ENST00000620197 OR11G2Q8NGC1 345 aa12.11□□□□□ -0.47
SKP2-209ENST00000620197 OR5J2Q8NH18 312 aa12.11□□□□□ -0.47
SKP2-209ENST00000620197 FLVCR1-AS1Q8TAF5 88 aa12.11□□□□□ -0.47
SKP2-209ENST00000620197 PEX11GQ96HA9 241 aa12.11□□□□□ -0.47
SKP2-209ENST00000620197 SDF2Q99470 211 aa12.11□□□□□ -0.47
SKP2-209ENST00000620197 TIMM29Q9BSF4 260 aa12.11□□□□□ -0.47
SKP2-209ENST00000620197 MEPEQ9NQ76 525 aaPredicted RBP12.11□□□□□ -0.47
SKP2-209ENST00000620197 SERTAD3Q9UJW9 196 aa12.11□□□□□ -0.47
SKP2-209ENST00000620197 CHD9Q3L8U1 2897 aa12.1□□□□□ -0.47
SKP2-209ENST00000620197 DUXAA6NLW8 204 aa12.1□□□□□ -0.47
SKP2-209ENST00000620197 SLC35G4P0C7Q5 338 aa12.1□□□□□ -0.47
SKP2-209ENST00000620197 RRASP10301 218 aa12.1□□□□□ -0.47
SKP2-209ENST00000620197 PRG2P13727 222 aa12.1□□□□□ -0.47
SKP2-209ENST00000620197 TALDO1P37837 337 aa12.1□□□□□ -0.47
SKP2-209ENST00000620197 SOX9P48436 509 aa12.1□□□□□ -0.47
SKP2-209ENST00000620197 POU6F2P78424 691 aaPredicted RBP12.1□□□□□ -0.47
SKP2-209ENST00000620197 ZNF234Q14588 700 aa12.1□□□□□ -0.47
SKP2-209ENST00000620197 VN1R4Q7Z5H5 301 aa12.1□□□□□ -0.47
SKP2-209ENST00000620197 CEACAM19Q7Z692 300 aa12.1□□□□□ -0.47
SKP2-209ENST00000620197 NRROSQ86YC3 692 aa12.1□□□□□ -0.47
SKP2-209ENST00000620197 RFLNBQ8N5W9 214 aa12.1□□□□□ -0.47
SKP2-209ENST00000620197 MRPL43Q8N983 215 aaKnown RBP12.1□□□□□ -0.47
SKP2-209ENST00000620197 TM4SF19Q96DZ7 209 aa12.1□□□□□ -0.47
SKP2-209ENST00000620197 SCARF2Q96GP6 870 aaPredicted RBP12.1□□□□□ -0.47
SKP2-209ENST00000620197 NDC1Q9BTX1 674 aa12.1□□□□□ -0.47
SKP2-209ENST00000620197 TRMT61BQ9BVS5 477 aaKnown RBP12.1□□□□□ -0.47
SKP2-209ENST00000620197 DPH1Q9BZG8 443 aa12.1□□□□□ -0.47
SKP2-209ENST00000620197 CREBZFQ9NS37 354 aa12.1□□□□□ -0.47
SKP2-209ENST00000620197 FBXL3Q9UKT7 428 aa12.1□□□□□ -0.47
SKP2-209ENST00000620197 CDHR4A6H8M9 788 aa12.1□□□□□ -0.47
SKP2-209ENST00000620197 TUBAL3A6NHL2 446 aa12.1□□□□□ -0.47
SKP2-209ENST00000620197 OR6C65A6NJZ3 312 aa12.1□□□□□ -0.47
SKP2-209ENST00000620197 WNT1P04628 370 aa12.1□□□□□ -0.47
SKP2-209ENST00000620197 GIFP27352 417 aa12.1□□□□□ -0.47
SKP2-209ENST00000620197 NOS3P29474 1203 aa12.1□□□□□ -0.47
SKP2-209ENST00000620197 ST8SIA6P61647 398 aa12.1□□□□□ -0.47
SKP2-209ENST00000620197 ELFN2Q5R3F8 820 aa12.1□□□□□ -0.47
SKP2-209ENST00000620197 AGBL4Q5VU57 503 aa12.1□□□□□ -0.47
SKP2-209ENST00000620197 LINC00114Q6XXX2 140 aa12.1□□□□□ -0.47
SKP2-209ENST00000620197 SLC43A2Q8N370 569 aa12.1□□□□□ -0.47
SKP2-209ENST00000620197 SLC44A3Q8N4M1 653 aa12.1□□□□□ -0.47
SKP2-209ENST00000620197 C4orf36Q96KX1 117 aa12.1□□□□□ -0.47
SKP2-209ENST00000620197 MBNL1Q9NR56 388 aaKnown RBP12.1□□□□□ -0.47
SKP2-209ENST00000620197 KLHL28Q9NXS3 571 aa12.1□□□□□ -0.47
SKP2-209ENST00000620197 RABL2AQ9UBK7 228 aaPredicted RBP12.1□□□□□ -0.47
SKP2-209ENST00000620197 SCP2D1Q9UJQ7 156 aa12.1□□□□□ -0.47
SKP2-209ENST00000620197 RABL2BQ9UNT1 228 aa12.1□□□□□ -0.47
SKP2-209ENST00000620197 TRPM6Q9BX84 2022 aa12.1□□□□□ -0.47
SKP2-209ENST00000620197 DAPL1A0PJW8 107 aa12.1□□□□□ -0.47
SKP2-209ENST00000620197 EXOSC2Q13868 293 aaKnown RBP12.1□□□□□ -0.47
SKP2-209ENST00000620197 DUSP5Q16690 384 aa12.1□□□□□ -0.47
SKP2-209ENST00000620197 OVCH1Q7RTY7 1134 aa12.1□□□□□ -0.47
SKP2-209ENST00000620197 ADGRD2Q7Z7M1 963 aa12.1□□□□□ -0.47
SKP2-209ENST00000620197 GPAT4Q86UL3 456 aa12.1□□□□□ -0.47
SKP2-209ENST00000620197 PAQR7Q86WK9 346 aa12.1□□□□□ -0.47
SKP2-209ENST00000620197 GRAMD2AQ8IUY3 354 aa12.1□□□□□ -0.47
SKP2-209ENST00000620197 IQCF2Q8IXL9 164 aa12.1□□□□□ -0.47
SKP2-209ENST00000620197 DDOQ99489 341 aa12.1□□□□□ -0.47
SKP2-209ENST00000620197 REG4Q9BYZ8 158 aa12.1□□□□□ -0.47
SKP2-209ENST00000620197 MRPS30Q9NP92 439 aaKnown RBP12.1□□□□□ -0.47
SKP2-209ENST00000620197 KRCC1Q9NPI7 259 aaPredicted RBP12.1□□□□□ -0.47
SKP2-209ENST00000620197 EVA1BQ9NVM1 165 aa12.1□□□□□ -0.47
SKP2-209ENST00000620197 SPATA2Q9UM82 520 aa12.1□□□□□ -0.47
SKP2-209ENST00000620197 TRAV6A0A075B6T7 132 aa12.09□□□□□ -0.47
SKP2-209ENST00000620197 TSC22D2O75157 780 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms