RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 EFNA2O43921 213 aa9.96□□□□□ -0.82
TARDBP-221ENST00000619555 NTN1O95631 604 aa9.96□□□□□ -0.82
TARDBP-221ENST00000619555 HMGN2P05204 90 aaKnown RBP9.96□□□□□ -0.82
TARDBP-221ENST00000619555 LINGO3P0C6S8 592 aa9.96□□□□□ -0.82
TARDBP-221ENST00000619555 PPP3CBP16298 524 aa9.96□□□□□ -0.82
TARDBP-221ENST00000619555 PRPS1L1P21108 318 aa9.96□□□□□ -0.82
TARDBP-221ENST00000619555 AGTR1P30556 359 aa9.96□□□□□ -0.82
TARDBP-221ENST00000619555 LCN1P31025 176 aa9.96□□□□□ -0.82
TARDBP-221ENST00000619555 SFTPDP35247 375 aa9.96□□□□□ -0.82
TARDBP-221ENST00000619555 PTH2RP49190 550 aa9.96□□□□□ -0.82
TARDBP-221ENST00000619555 NME5P56597 212 aa9.96□□□□□ -0.82
TARDBP-221ENST00000619555 CARD18P57730 90 aa9.96□□□□□ -0.82
TARDBP-221ENST00000619555 UFM1P61960 85 aa9.96□□□□□ -0.82
TARDBP-221ENST00000619555 PHC1P78364 1004 aa9.96□□□□□ -0.82
TARDBP-221ENST00000619555 POU6F2P78424 691 aaPredicted RBP9.96□□□□□ -0.82
TARDBP-221ENST00000619555 FOXF1Q12946 379 aa9.96□□□□□ -0.82
TARDBP-221ENST00000619555 LASP1Q14847 261 aaKnown RBP9.96□□□□□ -0.82
TARDBP-221ENST00000619555 LSM12Q3MHD2 195 aaKnown RBP9.96□□□□□ -0.82
TARDBP-221ENST00000619555 ALKBH2Q6NS38 261 aa9.96□□□□□ -0.82
TARDBP-221ENST00000619555 ZCCHC12Q6PEW1 402 aa9.96□□□□□ -0.82
TARDBP-221ENST00000619555 ZNF704Q6ZNC4 412 aaPredicted RBP9.96□□□□□ -0.82
TARDBP-221ENST00000619555 PLEKHM3Q6ZWE6 761 aa9.96□□□□□ -0.82
TARDBP-221ENST00000619555 R3HCC1LQ7Z5L2 792 aaKnown RBP9.96□□□□□ -0.82
TARDBP-221ENST00000619555 MISPQ8IVT2 679 aa9.96□□□□□ -0.82
TARDBP-221ENST00000619555 LILRA2Q8N149 483 aa9.96□□□□□ -0.82
TARDBP-221ENST00000619555 PHOSPHO1Q8TCT1 267 aa9.96□□□□□ -0.82
TARDBP-221ENST00000619555 IGFBPL1Q8WX77 278 aa9.96□□□□□ -0.82
TARDBP-221ENST00000619555 THOC1Q96FV9 657 aaKnown RBP9.96□□□□□ -0.82
TARDBP-221ENST00000619555 PLPPR2Q96GM1 343 aa9.96□□□□□ -0.82
TARDBP-221ENST00000619555 KLHL15Q96M94 604 aa9.96□□□□□ -0.82
TARDBP-221ENST00000619555 BDH2Q9BUT1 245 aa9.96□□□□□ -0.82
TARDBP-221ENST00000619555 BTBD2Q9BX70 525 aa9.96□□□□□ -0.82
TARDBP-221ENST00000619555 GSX2Q9BZM3 304 aa9.96□□□□□ -0.82
TARDBP-221ENST00000619555 ACTR6Q9GZN1 396 aa9.96□□□□□ -0.82
TARDBP-221ENST00000619555 HHATLQ9HCP6 504 aa9.96□□□□□ -0.82
TARDBP-221ENST00000619555 MED4Q9NPJ6 270 aa9.96□□□□□ -0.82
TARDBP-221ENST00000619555 GLRX2Q9NS18 164 aa9.96□□□□□ -0.82
TARDBP-221ENST00000619555 ZCCHC3Q9NUD5 404 aaKnown RBP9.96□□□□□ -0.82
TARDBP-221ENST00000619555 SNX8Q9Y5X2 465 aa9.96□□□□□ -0.82
TARDBP-221ENST00000619555 GPR45Q9Y5Y3 372 aa9.96□□□□□ -0.82
TARDBP-221ENST00000619555 KCNE3Q9Y6H6 103 aa9.96□□□□□ -0.82
TARDBP-221ENST00000619555 ABCA1O95477 2261 aa9.96□□□□□ -0.82
TARDBP-221ENST00000619555 COL6A5A8TX70 2615 aa9.95□□□□□ -0.82
TARDBP-221ENST00000619555 A0A1W2PQD3 144 aa9.95□□□□□ -0.82
TARDBP-221ENST00000619555 FAM171A2A8MVW0 826 aa9.95□□□□□ -0.82
TARDBP-221ENST00000619555 EDF1O60869 148 aaKnown RBP9.95□□□□□ -0.82
TARDBP-221ENST00000619555 SCN2BO60939 215 aa9.95□□□□□ -0.82
TARDBP-221ENST00000619555 C6orf47O95873 294 aa9.95□□□□□ -0.82
TARDBP-221ENST00000619555 ME2P23368 584 aa9.95□□□□□ -0.82
TARDBP-221ENST00000619555 PCSK6P29122 969 aa9.95□□□□□ -0.82
TARDBP-221ENST00000619555 IDH3AP50213 366 aa9.95□□□□□ -0.82
TARDBP-221ENST00000619555 GUCY1A3Q02108 690 aa9.95□□□□□ -0.82
TARDBP-221ENST00000619555 ZNF117Q03924 483 aa9.95□□□□□ -0.82
TARDBP-221ENST00000619555 MLC1Q15049 377 aa9.95□□□□□ -0.82
TARDBP-221ENST00000619555 TSC22D1Q15714 1073 aa9.95□□□□□ -0.82
TARDBP-221ENST00000619555 NDUFAF6Q330K2 333 aa9.95□□□□□ -0.82
TARDBP-221ENST00000619555 SPANXN4Q5MJ08 99 aa9.95□□□□□ -0.82
TARDBP-221ENST00000619555 PDSS1Q5T2R2 415 aa9.95□□□□□ -0.82
TARDBP-221ENST00000619555 NXNQ6DKJ4 435 aa9.95□□□□□ -0.82
TARDBP-221ENST00000619555 OR4F3Q6IEY1 312 aa9.95□□□□□ -0.82
TARDBP-221ENST00000619555 CGB2Q6NT52 195 aa9.95□□□□□ -0.82
TARDBP-221ENST00000619555 CBLN3Q6UW01 205 aa9.95□□□□□ -0.82
TARDBP-221ENST00000619555 BEND4Q6ZU67 534 aa9.95□□□□□ -0.82
TARDBP-221ENST00000619555 NUFIP2Q7Z417 695 aaKnown RBP9.95□□□□□ -0.82
TARDBP-221ENST00000619555 SPATA19Q7Z5L4 167 aa9.95□□□□□ -0.82
TARDBP-221ENST00000619555 CLECL1Q8IZS7 167 aa9.95□□□□□ -0.82
TARDBP-221ENST00000619555 RFWD2Q8NHY2 731 aa9.95□□□□□ -0.82
TARDBP-221ENST00000619555 FBXO27Q8NI29 283 aa9.95□□□□□ -0.82
TARDBP-221ENST00000619555 ABHD3Q8WU67 409 aa9.95□□□□□ -0.82
TARDBP-221ENST00000619555 ZNF524Q96C55 264 aa9.95□□□□□ -0.82
TARDBP-221ENST00000619555 STACQ99469 402 aa9.95□□□□□ -0.82
TARDBP-221ENST00000619555 SRXN1Q9BYN0 137 aa9.95□□□□□ -0.82
TARDBP-221ENST00000619555 DPY30Q9C005 99 aa9.95□□□□□ -0.82
TARDBP-221ENST00000619555 PIGUQ9H490 435 aa9.95□□□□□ -0.82
TARDBP-221ENST00000619555 CXorf36Q9H7Y0 433 aa9.95□□□□□ -0.82
TARDBP-221ENST00000619555 DUSP22Q9NRW4 184 aa9.95□□□□□ -0.82
TARDBP-221ENST00000619555 CARD8Q9Y2G2 431 aa9.95□□□□□ -0.82
TARDBP-221ENST00000619555 GPR52Q9Y2T5 361 aa9.95□□□□□ -0.82
TARDBP-221ENST00000619555 PLCE1Q9P212 2302 aa9.95□□□□□ -0.82
TARDBP-221ENST00000619555 CNOT4O95628 575 aaKnown RBP9.94□□□□□ -0.82
TARDBP-221ENST00000619555 C1QCP02747 245 aa9.94□□□□□ -0.82
TARDBP-221ENST00000619555 NID1P14543 1247 aa9.94□□□□□ -0.82
TARDBP-221ENST00000619555 PSMB1P20618 241 aaKnown RBP9.94□□□□□ -0.82
TARDBP-221ENST00000619555 ATP6V1C1P21283 382 aa9.94□□□□□ -0.82
TARDBP-221ENST00000619555 RPL3P39023 403 aaKnown RBP9.94□□□□□ -0.82
TARDBP-221ENST00000619555 EIF1P41567 113 aaKnown RBP9.94□□□□□ -0.82
TARDBP-221ENST00000619555 CCT3P49368 545 aaKnown RBP9.94□□□□□ -0.82
TARDBP-221ENST00000619555 AQP5P55064 265 aa9.94□□□□□ -0.82
TARDBP-221ENST00000619555 TP53BP2Q13625 1128 aa9.94□□□□□ -0.82
TARDBP-221ENST00000619555 TOMM34Q15785 309 aaPredicted RBP9.94□□□□□ -0.82
TARDBP-221ENST00000619555 ZNF239Q16600 458 aaKnown RBP9.94□□□□□ -0.82
TARDBP-221ENST00000619555 PGS1Q32NB8 556 aa9.94□□□□□ -0.82
TARDBP-221ENST00000619555 TMEM176BQ3YBM2 270 aaPredicted RBP9.94□□□□□ -0.82
TARDBP-221ENST00000619555 KLHL26Q53HC5 615 aa9.94□□□□□ -0.82
TARDBP-221ENST00000619555 HSP90B2PQ58FF3 399 aa9.94□□□□□ -0.82
TARDBP-221ENST00000619555 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.94□□□□□ -0.82
TARDBP-221ENST00000619555 GTF2IRD2BQ6EKJ0 949 aa9.94□□□□□ -0.82
TARDBP-221ENST00000619555 CDC73Q6P1J9 531 aa9.94□□□□□ -0.82
TARDBP-221ENST00000619555 GTF2IRD2Q86UP8 949 aa9.94□□□□□ -0.82
TARDBP-221ENST00000619555 STK32CQ86UX6 486 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms