RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 ADORA3P0DMS8 318 aa11.67□□□□□ -0.54
TNFAIP3-209ENST00000619035 CD59P13987 128 aa11.67□□□□□ -0.54
TNFAIP3-209ENST00000619035 LCN1P31025 176 aa11.67□□□□□ -0.54
TNFAIP3-209ENST00000619035 TSPAN7P41732 249 aa11.67□□□□□ -0.54
TNFAIP3-209ENST00000619035 CCR4P51679 360 aa11.67□□□□□ -0.54
TNFAIP3-209ENST00000619035 CSNK2BP67870 215 aa11.67□□□□□ -0.54
TNFAIP3-209ENST00000619035 TSPAN31Q12999 210 aa11.67□□□□□ -0.54
TNFAIP3-209ENST00000619035 GINS1Q14691 196 aa11.67□□□□□ -0.54
TNFAIP3-209ENST00000619035 TIGD6Q17RP2 521 aa11.67□□□□□ -0.54
TNFAIP3-209ENST00000619035 SOWAHCQ53LP3 525 aaPredicted RBP11.67□□□□□ -0.54
TNFAIP3-209ENST00000619035 CLEC12AQ5QGZ9 265 aa11.67□□□□□ -0.54
TNFAIP3-209ENST00000619035 UBE2UQ5VVX9 321 aa11.67□□□□□ -0.54
TNFAIP3-209ENST00000619035 CD300LDQ6UXZ3 194 aa11.67□□□□□ -0.54
TNFAIP3-209ENST00000619035 TMCO5AQ8N6Q1 288 aa11.67□□□□□ -0.54
TNFAIP3-209ENST00000619035 TEX47Q8TBZ9 253 aa11.67□□□□□ -0.54
TNFAIP3-209ENST00000619035 PHOSPHO1Q8TCT1 267 aa11.67□□□□□ -0.54
TNFAIP3-209ENST00000619035 TMEM239Q8WW34 195 aa11.67□□□□□ -0.54
TNFAIP3-209ENST00000619035 MR1Q95460 341 aa11.67□□□□□ -0.54
TNFAIP3-209ENST00000619035 SPSB2Q99619 263 aa11.67□□□□□ -0.54
TNFAIP3-209ENST00000619035 CDC6Q99741 560 aa11.67□□□□□ -0.54
TNFAIP3-209ENST00000619035 CMKLR1Q99788 373 aa11.67□□□□□ -0.54
TNFAIP3-209ENST00000619035 EDEM2Q9BV94 578 aa11.67□□□□□ -0.54
TNFAIP3-209ENST00000619035 KRCC1Q9NPI7 259 aaPredicted RBP11.67□□□□□ -0.54
TNFAIP3-209ENST00000619035 RPS6KB2Q9UBS0 482 aa11.67□□□□□ -0.54
TNFAIP3-209ENST00000619035 IL20RAQ9UHF4 553 aa11.67□□□□□ -0.54
TNFAIP3-209ENST00000619035 GPN3Q9UHW5 284 aaPredicted RBP11.67□□□□□ -0.54
TNFAIP3-209ENST00000619035 A0A1B0GWA3 101 aa11.67□□□□□ -0.54
TNFAIP3-209ENST00000619035 SAGE2PA6NJ88 616 aa11.67□□□□□ -0.54
TNFAIP3-209ENST00000619035 TLX2O43763 284 aaPredicted RBP11.67□□□□□ -0.54
TNFAIP3-209ENST00000619035 GMFGO60234 142 aa11.67□□□□□ -0.54
TNFAIP3-209ENST00000619035 ICOSLGO75144 302 aa11.67□□□□□ -0.54
TNFAIP3-209ENST00000619035 GRK5P34947 590 aa11.67□□□□□ -0.54
TNFAIP3-209ENST00000619035 ACAA2P42765 397 aaKnown RBP11.67□□□□□ -0.54
TNFAIP3-209ENST00000619035 SPEM2Q0P670 501 aa11.67□□□□□ -0.54
TNFAIP3-209ENST00000619035 DCTN2Q13561 401 aaKnown RBP11.67□□□□□ -0.54
TNFAIP3-209ENST00000619035 CD226Q15762 336 aa11.67□□□□□ -0.54
TNFAIP3-209ENST00000619035 KLHL26Q53HC5 615 aa11.67□□□□□ -0.54
TNFAIP3-209ENST00000619035 ALG10BQ5I7T1 473 aa11.67□□□□□ -0.54
TNFAIP3-209ENST00000619035 C12orf73Q69YU5 71 aa11.67□□□□□ -0.54
TNFAIP3-209ENST00000619035 PAPD4Q6PIY7 484 aaKnown RBP11.67□□□□□ -0.54
TNFAIP3-209ENST00000619035 ZNF550Q7Z398 422 aa11.67□□□□□ -0.54
TNFAIP3-209ENST00000619035 CMIPQ8IY22 773 aa11.67□□□□□ -0.54
TNFAIP3-209ENST00000619035 SUMF1Q8NBK3 374 aa11.67□□□□□ -0.54
TNFAIP3-209ENST00000619035 OR5M11Q96RB7 305 aa11.67□□□□□ -0.54
TNFAIP3-209ENST00000619035 PRRX2Q99811 253 aa11.67□□□□□ -0.54
TNFAIP3-209ENST00000619035 WDR54Q9H977 334 aa11.67□□□□□ -0.54
TNFAIP3-209ENST00000619035 NXT1Q9UKK6 140 aaKnown RBP11.67□□□□□ -0.54
TNFAIP3-209ENST00000619035 LRP3O75074 770 aa11.66□□□□□ -0.54
TNFAIP3-209ENST00000619035 TBCEQ15813 527 aaPredicted RBP11.66□□□□□ -0.54
TNFAIP3-209ENST00000619035 ZNF613Q6PF04 617 aa11.66□□□□□ -0.54
TNFAIP3-209ENST00000619035 C16orf47Q6ZP98 133 aaPredicted RBP11.66□□□□□ -0.54
TNFAIP3-209ENST00000619035 C17orf47Q8NEP4 570 aa11.66□□□□□ -0.54
TNFAIP3-209ENST00000619035 OR8D4Q8NGM9 314 aa11.66□□□□□ -0.54
TNFAIP3-209ENST00000619035 OMA1Q96E52 524 aa11.66□□□□□ -0.54
TNFAIP3-209ENST00000619035 DPH1Q9BZG8 443 aa11.66□□□□□ -0.54
TNFAIP3-209ENST00000619035 TRIM2Q9C040 744 aa11.66□□□□□ -0.54
TNFAIP3-209ENST00000619035 HOXD1Q9GZZ0 328 aa11.66□□□□□ -0.54
TNFAIP3-209ENST00000619035 RNF167Q9H6Y7 350 aa11.66□□□□□ -0.54
TNFAIP3-209ENST00000619035 ATP13A2Q9NQ11 1180 aa11.66□□□□□ -0.54
TNFAIP3-209ENST00000619035 TMEM9BQ9NQ34 198 aa11.66□□□□□ -0.54
TNFAIP3-209ENST00000619035 C20orf141Q9NUB4 165 aa11.66□□□□□ -0.54
TNFAIP3-209ENST00000619035 SLC35A3Q9Y2D2 325 aa11.66□□□□□ -0.54
TNFAIP3-209ENST00000619035 CARD8Q9Y2G2 431 aa11.66□□□□□ -0.54
TNFAIP3-209ENST00000619035 GPR52Q9Y2T5 361 aa11.66□□□□□ -0.54
TNFAIP3-209ENST00000619035 hCG_2014768A0A024R1R8 64 aa11.66□□□□□ -0.54
TNFAIP3-209ENST00000619035 A0A0B4J2E0 115 aa11.66□□□□□ -0.54
TNFAIP3-209ENST00000619035 A0A1B0GX12 115 aa11.66□□□□□ -0.54
TNFAIP3-209ENST00000619035 J3QRK9 145 aa11.66□□□□□ -0.54
TNFAIP3-209ENST00000619035 GTPBP1O00178 669 aaKnown RBP11.66□□□□□ -0.54
TNFAIP3-209ENST00000619035 CDC42EP2O14613 210 aa11.66□□□□□ -0.54
TNFAIP3-209ENST00000619035 CBFA2T3O75081 653 aa11.66□□□□□ -0.54
TNFAIP3-209ENST00000619035 APOL3O95236 402 aa11.66□□□□□ -0.54
TNFAIP3-209ENST00000619035 LYPD3O95274 346 aa11.66□□□□□ -0.54
TNFAIP3-209ENST00000619035 UBL4AP11441 157 aa11.66□□□□□ -0.54
TNFAIP3-209ENST00000619035 IFI30P13284 250 aa11.66□□□□□ -0.54
TNFAIP3-209ENST00000619035 FUT1P19526 365 aa11.66□□□□□ -0.54
TNFAIP3-209ENST00000619035 FPR3P25089 353 aa11.66□□□□□ -0.54
TNFAIP3-209ENST00000619035 ABCD3P28288 659 aa11.66□□□□□ -0.54
TNFAIP3-209ENST00000619035 GIPRP48546 466 aa11.66□□□□□ -0.54
TNFAIP3-209ENST00000619035 RNF4P78317 190 aa11.66□□□□□ -0.54
TNFAIP3-209ENST00000619035 DBPQ10586 325 aaPredicted RBP11.66□□□□□ -0.54
TNFAIP3-209ENST00000619035 KIRREL2Q6UWL6 708 aa11.66□□□□□ -0.54
TNFAIP3-209ENST00000619035 APOOLQ6UXV4 268 aa11.66□□□□□ -0.54
TNFAIP3-209ENST00000619035 HSDL2Q6YN16 418 aa11.66□□□□□ -0.54
TNFAIP3-209ENST00000619035 CPEB2Q7Z5Q1 589 aaKnown RBP11.66□□□□□ -0.54
TNFAIP3-209ENST00000619035 APCDD1LQ8NCL9 501 aa11.66□□□□□ -0.54
TNFAIP3-209ENST00000619035 SH3YL1Q96HL8 342 aaPredicted RBP11.66□□□□□ -0.54
TNFAIP3-209ENST00000619035 LPAR4Q99677 370 aa11.66□□□□□ -0.54
TNFAIP3-209ENST00000619035 ZPBPQ9BS86 351 aa11.66□□□□□ -0.54
TNFAIP3-209ENST00000619035 STRADBQ9C0K7 418 aa11.66□□□□□ -0.54
TNFAIP3-209ENST00000619035 SLC25A19Q9HC21 320 aa11.66□□□□□ -0.54
TNFAIP3-209ENST00000619035 TBC1D23Q9NUY8 699 aa11.66□□□□□ -0.54
TNFAIP3-209ENST00000619035 CLEC2DQ9UHP7 191 aa11.66□□□□□ -0.54
TNFAIP3-209ENST00000619035 ZNF223Q9UK11 482 aaPredicted RBP11.66□□□□□ -0.54
TNFAIP3-209ENST00000619035 LOXL2Q9Y4K0 774 aa11.66□□□□□ -0.54
TNFAIP3-209ENST00000619035 TNFRSF10AO00220 468 aa11.65□□□□□ -0.54
TNFAIP3-209ENST00000619035 CHP2O43745 196 aa11.65□□□□□ -0.54
TNFAIP3-209ENST00000619035 MPZL2O60487 215 aa11.65□□□□□ -0.54
TNFAIP3-209ENST00000619035 MRPS14O60783 128 aaKnown RBP11.65□□□□□ -0.54
TNFAIP3-209ENST00000619035 CH25HO95992 272 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms