RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 RAC1P63000 192 aa14.37□□□□□ -0.11
BRCA1-228ENST00000618469 CHRNEQ04844 493 aa14.37□□□□□ -0.11
BRCA1-228ENST00000618469 FGFBP1Q14512 234 aa14.37□□□□□ -0.11
BRCA1-228ENST00000618469 SQLEQ14534 574 aa14.37□□□□□ -0.11
BRCA1-228ENST00000618469 QPRTQ15274 297 aa14.37□□□□□ -0.11
BRCA1-228ENST00000618469 SGCBQ16585 318 aa14.37□□□□□ -0.11
BRCA1-228ENST00000618469 EIF3MQ7L2H7 374 aaKnown RBP14.37□□□□□ -0.11
BRCA1-228ENST00000618469 DMRTC2Q8IXT2 367 aaPredicted RBP14.37□□□□□ -0.11
BRCA1-228ENST00000618469 OR5W2Q8NH69 310 aa14.37□□□□□ -0.11
BRCA1-228ENST00000618469 OR10D3Q8NH80 312 aa14.37□□□□□ -0.11
BRCA1-228ENST00000618469 FBXO27Q8NI29 283 aa14.37□□□□□ -0.11
BRCA1-228ENST00000618469 GPR119Q8TDV5 335 aa14.37□□□□□ -0.11
BRCA1-228ENST00000618469 OIT3Q8WWZ8 545 aa14.37□□□□□ -0.11
BRCA1-228ENST00000618469 GTF2H4Q92759 462 aa14.37□□□□□ -0.11
BRCA1-228ENST00000618469 SPDL1Q96EA4 605 aa14.37□□□□□ -0.11
BRCA1-228ENST00000618469 TRNT1Q96Q11 434 aaKnown RBP14.37□□□□□ -0.11
BRCA1-228ENST00000618469 SAP130Q9H0E3 1048 aa14.37□□□□□ -0.11
BRCA1-228ENST00000618469 TPT1P8Q9HAU6 139 aa14.37□□□□□ -0.11
BRCA1-228ENST00000618469 P2RX2Q9UBL9 471 aa14.37□□□□□ -0.11
BRCA1-228ENST00000618469 LIPT1Q9Y234 373 aa14.37□□□□□ -0.11
BRCA1-228ENST00000618469 ZNF175Q9Y473 711 aa14.37□□□□□ -0.11
BRCA1-228ENST00000618469 GPC6Q9Y625 555 aaPredicted RBP14.37□□□□□ -0.11
BRCA1-228ENST00000618469 AKAP6Q13023 2319 aa14.36□□□□□ -0.11
BRCA1-228ENST00000618469 A0A0G2JND7 137 aa14.36□□□□□ -0.11
BRCA1-228ENST00000618469 A0A1W2PNV4 684 aa14.36□□□□□ -0.11
BRCA1-228ENST00000618469 TNFSF11O14788 317 aa14.36□□□□□ -0.11
BRCA1-228ENST00000618469 NR2F1P10589 423 aa14.36□□□□□ -0.11
BRCA1-228ENST00000618469 FCGR2AP12318 317 aa14.36□□□□□ -0.11
BRCA1-228ENST00000618469 ETFAP13804 333 aa14.36□□□□□ -0.11
BRCA1-228ENST00000618469 PRKCAP17252 672 aa14.36□□□□□ -0.11
BRCA1-228ENST00000618469 SFTPDP35247 375 aa14.36□□□□□ -0.11
BRCA1-228ENST00000618469 CPA2P48052 419 aa14.36□□□□□ -0.11
BRCA1-228ENST00000618469 ATP4BP51164 291 aa14.36□□□□□ -0.11
BRCA1-228ENST00000618469 MVDP53602 400 aa14.36□□□□□ -0.11
BRCA1-228ENST00000618469 IST1P53990 364 aa14.36□□□□□ -0.11
BRCA1-228ENST00000618469 DLX5P56178 289 aa14.36□□□□□ -0.11
BRCA1-228ENST00000618469 MYBPHQ13203 477 aa14.36□□□□□ -0.11
BRCA1-228ENST00000618469 SNTB1Q13884 538 aaKnown RBP14.36□□□□□ -0.11
BRCA1-228ENST00000618469 CTU2Q2VPK5 515 aaKnown RBP14.36□□□□□ -0.11
BRCA1-228ENST00000618469 AGKQ53H12 422 aa14.36□□□□□ -0.11
BRCA1-228ENST00000618469 HSP90B2PQ58FF3 399 aa14.36□□□□□ -0.11
BRCA1-228ENST00000618469 OR2A2Q6IF42 318 aa14.36□□□□□ -0.11
BRCA1-228ENST00000618469 FUNDC1Q8IVP5 155 aa14.36□□□□□ -0.11
BRCA1-228ENST00000618469 CNEP1R1Q8N9A8 125 aa14.36□□□□□ -0.11
BRCA1-228ENST00000618469 FAM71CQ8NEG0 241 aa14.36□□□□□ -0.11
BRCA1-228ENST00000618469 STON2Q8WXE9 905 aa14.36□□□□□ -0.11
BRCA1-228ENST00000618469 RNASE6Q93091 150 aaKnown RBP14.36□□□□□ -0.11
BRCA1-228ENST00000618469 ADGRG7Q96K78 797 aa14.36□□□□□ -0.11
BRCA1-228ENST00000618469 KLHL15Q96M94 604 aa14.36□□□□□ -0.11
BRCA1-228ENST00000618469 LAT2Q9GZY6 243 aa14.36□□□□□ -0.11
BRCA1-228ENST00000618469 PAIP1Q9H074 479 aaKnown RBP14.36□□□□□ -0.11
BRCA1-228ENST00000618469 SLC38A1Q9H2H9 487 aa14.36□□□□□ -0.11
BRCA1-228ENST00000618469 SLC35A3Q9Y2D2 325 aa14.36□□□□□ -0.11
BRCA1-228ENST00000618469 HEATR5AQ86XA9 2040 aa14.36□□□□□ -0.11
BRCA1-228ENST00000618469 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.35□□□□□ -0.11
BRCA1-228ENST00000618469 CLDN24A6NM45 220 aa14.35□□□□□ -0.11
BRCA1-228ENST00000618469 CXCL13O43927 109 aa14.35□□□□□ -0.11
BRCA1-228ENST00000618469 BCAS1O75363 584 aaPredicted RBP14.35□□□□□ -0.11
BRCA1-228ENST00000618469 TNFSF13O75888 250 aa14.35□□□□□ -0.11
BRCA1-228ENST00000618469 BCHEP06276 602 aa14.35□□□□□ -0.11
BRCA1-228ENST00000618469 NCF2P19878 526 aaPredicted RBP14.35□□□□□ -0.11
BRCA1-228ENST00000618469 SHC1P29353 583 aa14.35□□□□□ -0.11
BRCA1-228ENST00000618469 DNAJA1P31689 397 aaKnown RBP14.35□□□□□ -0.11
BRCA1-228ENST00000618469 PGM1P36871 562 aa14.35□□□□□ -0.11
BRCA1-228ENST00000618469 MAGEA8P43361 318 aa14.35□□□□□ -0.11
BRCA1-228ENST00000618469 DSTNP60981 165 aa14.35□□□□□ -0.11
BRCA1-228ENST00000618469 SIRPAP78324 504 aa14.35□□□□□ -0.11
BRCA1-228ENST00000618469 FBXL19-AS1Q494R0 122 aa14.35□□□□□ -0.11
BRCA1-228ENST00000618469 BLOC1S3Q6QNY0 202 aa14.35□□□□□ -0.11
BRCA1-228ENST00000618469 LRRC74BQ6ZQY2 392 aa14.35□□□□□ -0.11
BRCA1-228ENST00000618469 ESPNLQ6ZVH7 1005 aa14.35□□□□□ -0.11
BRCA1-228ENST00000618469 LUZP2Q86TE4 346 aa14.35□□□□□ -0.11
BRCA1-228ENST00000618469 LILRA2Q8N149 483 aa14.35□□□□□ -0.11
BRCA1-228ENST00000618469 ARFGAP2Q8N6H7 521 aa14.35□□□□□ -0.11
BRCA1-228ENST00000618469 OR2V1Q8NHB1 315 aa14.35□□□□□ -0.11
BRCA1-228ENST00000618469 WDR60Q8WVS4 1066 aa14.35□□□□□ -0.11
BRCA1-228ENST00000618469 ZG16BQ96DA0 208 aa14.35□□□□□ -0.11
BRCA1-228ENST00000618469 MRGPRX4Q96LA9 322 aa14.35□□□□□ -0.11
BRCA1-228ENST00000618469 SIKE1Q9BRV8 207 aa14.35□□□□□ -0.11
BRCA1-228ENST00000618469 THUMPD3Q9BV44 507 aaKnown RBP14.35□□□□□ -0.11
BRCA1-228ENST00000618469 PRRG4Q9BZD6 226 aa14.35□□□□□ -0.11
BRCA1-228ENST00000618469 RNF122Q9H9V4 155 aa14.35□□□□□ -0.11
BRCA1-228ENST00000618469 PACSIN3Q9UKS6 424 aa14.35□□□□□ -0.11
BRCA1-228ENST00000618469 PCDHB14Q9Y5E9 798 aa14.35□□□□□ -0.11
BRCA1-228ENST00000618469 MAP1AP78559 2803 aaPredicted RBP14.35□□□□□ -0.11
BRCA1-228ENST00000618469 A0A096LPI6 279 aa14.34□□□□□ -0.11
BRCA1-228ENST00000618469 A0A0J9YW62 118 aa14.34□□□□□ -0.11
BRCA1-228ENST00000618469 AQP8O94778 261 aa14.34□□□□□ -0.11
BRCA1-228ENST00000618469 HOXB9P17482 250 aaPredicted RBP14.34□□□□□ -0.11
BRCA1-228ENST00000618469 ADH6P28332 368 aa14.34□□□□□ -0.11
BRCA1-228ENST00000618469 CPOXP36551 454 aa14.34□□□□□ -0.11
BRCA1-228ENST00000618469 IRX1P78414 480 aaPredicted RBP14.34□□□□□ -0.11
BRCA1-228ENST00000618469 KCNJ10P78508 379 aa14.34□□□□□ -0.11
BRCA1-228ENST00000618469 PLAURQ03405 335 aa14.34□□□□□ -0.11
BRCA1-228ENST00000618469 SELENBP1Q13228 472 aa14.34□□□□□ -0.11
BRCA1-228ENST00000618469 PDSS1Q5T2R2 415 aa14.34□□□□□ -0.11
BRCA1-228ENST00000618469 HBMQ6B0K9 141 aa14.34□□□□□ -0.11
BRCA1-228ENST00000618469 VWA1Q6PCB0 445 aa14.34□□□□□ -0.11
BRCA1-228ENST00000618469 Q71RC1 249 aaPredicted RBP14.34□□□□□ -0.11
BRCA1-228ENST00000618469 ATP6V1C2Q8NEY4 427 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms