RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 PRKAR1BP31321 381 aa12.93□□□□□ -0.34
CIITA-213ENST00000618327 ALG10Q5BKT4 473 aa12.93□□□□□ -0.34
CIITA-213ENST00000618327 WBP2NLQ6ICG8 309 aa12.93□□□□□ -0.34
CIITA-213ENST00000618327 PLCZ1Q86YW0 608 aa12.93□□□□□ -0.34
CIITA-213ENST00000618327 CYB561A3Q8NBI2 242 aa12.93□□□□□ -0.34
CIITA-213ENST00000618327 RCBTB1Q8NDN9 531 aa12.93□□□□□ -0.34
CIITA-213ENST00000618327 SENP5Q96HI0 755 aaPredicted RBP12.93□□□□□ -0.34
CIITA-213ENST00000618327 CNN2Q99439 309 aaKnown RBP12.93□□□□□ -0.34
CIITA-213ENST00000618327 AIFM2Q9BRQ8 373 aa12.93□□□□□ -0.34
CIITA-213ENST00000618327 NDUFAF4Q9P032 175 aa12.93□□□□□ -0.34
CIITA-213ENST00000618327 A0A1W2PRQ8 180 aa12.92□□□□□ -0.34
CIITA-213ENST00000618327 FGF17O60258 216 aa12.92□□□□□ -0.34
CIITA-213ENST00000618327 SYNGR4O95473 234 aa12.92□□□□□ -0.34
CIITA-213ENST00000618327 EIF2S3P41091 472 aaKnown RBP12.92□□□□□ -0.34
CIITA-213ENST00000618327 DAPP51397 102 aa12.92□□□□□ -0.34
CIITA-213ENST00000618327 ZNF691Q5VV52 312 aa12.92□□□□□ -0.34
CIITA-213ENST00000618327 FNDC8Q8TC99 324 aa12.92□□□□□ -0.34
CIITA-213ENST00000618327 LCORQ96JN0 433 aaPredicted RBP12.92□□□□□ -0.34
CIITA-213ENST00000618327 TIGARQ9NQ88 270 aa12.92□□□□□ -0.34
CIITA-213ENST00000618327 RXFP3Q9NSD7 469 aa12.92□□□□□ -0.34
CIITA-213ENST00000618327 RNF215Q9Y6U7 377 aa12.92□□□□□ -0.34
CIITA-213ENST00000618327 KNTC1P50748 2209 aa12.92□□□□□ -0.34
CIITA-213ENST00000618327 MYO10Q9HD67 2058 aa12.92□□□□□ -0.34
CIITA-213ENST00000618327 KCNE1BA0A087WTH5 132 aa12.92□□□□□ -0.34
CIITA-213ENST00000618327 LILRA5A6NI73 299 aa12.92□□□□□ -0.34
CIITA-213ENST00000618327 BOLA2-SMG1P6H3BVE0 249 aa12.92□□□□□ -0.34
CIITA-213ENST00000618327 OR2T1O43869 369 aa12.92□□□□□ -0.34
CIITA-213ENST00000618327 GATBO75879 557 aaKnown RBP12.92□□□□□ -0.34
CIITA-213ENST00000618327 RASGEF1BQ0VAM2 473 aa12.92□□□□□ -0.34
CIITA-213ENST00000618327 LEXMQ3ZCV2 418 aa12.92□□□□□ -0.34
CIITA-213ENST00000618327 KLHL26Q53HC5 615 aa12.92□□□□□ -0.34
CIITA-213ENST00000618327 PAPD4Q6PIY7 484 aaKnown RBP12.92□□□□□ -0.34
CIITA-213ENST00000618327 OR52D1Q9H346 318 aa12.92□□□□□ -0.34
CIITA-213ENST00000618327 RLIMQ9NVW2 624 aa12.92□□□□□ -0.34
CIITA-213ENST00000618327 TAS2R10Q9NYW0 307 aa12.92□□□□□ -0.34
CIITA-213ENST00000618327 NXT1Q9UKK6 140 aaKnown RBP12.92□□□□□ -0.34
CIITA-213ENST00000618327 C19orf53Q9UNZ5 99 aaPredicted RBP12.92□□□□□ -0.34
CIITA-213ENST00000618327 SH3PXD2BA1X283 911 aa12.92□□□□□ -0.34
CIITA-213ENST00000618327 H3BML4 177 aa12.92□□□□□ -0.34
CIITA-213ENST00000618327 ZNF264O43296 627 aa12.92□□□□□ -0.34
CIITA-213ENST00000618327 POLR2IP36954 125 aaKnown RBP12.92□□□□□ -0.34
CIITA-213ENST00000618327 SHFQ7M4L6 423 aa12.92□□□□□ -0.34
CIITA-213ENST00000618327 ADGRF3Q8IZF5 1079 aa12.92□□□□□ -0.34
CIITA-213ENST00000618327 PAPD5Q8NDF8 572 aaKnown RBP12.92□□□□□ -0.34
CIITA-213ENST00000618327 LGALS12Q96DT0 336 aa12.92□□□□□ -0.34
CIITA-213ENST00000618327 NAA11Q9BSU3 229 aaPredicted RBP12.92□□□□□ -0.34
CIITA-213ENST00000618327 FUNDC2Q9BWH2 189 aa12.92□□□□□ -0.34
CIITA-213ENST00000618327 ZNF717Q9BY31 904 aaPredicted RBP12.92□□□□□ -0.34
CIITA-213ENST00000618327 MROQ9BYG7 248 aa12.92□□□□□ -0.34
CIITA-213ENST00000618327 NUDT15Q9NV35 164 aa12.92□□□□□ -0.34
CIITA-213ENST00000618327 COLQQ9Y215 455 aaPredicted RBP12.92□□□□□ -0.34
CIITA-213ENST00000618327 H3BSH0 61 aa12.92□□□□□ -0.34
CIITA-213ENST00000618327 HMGN4O00479 90 aa12.92□□□□□ -0.34
CIITA-213ENST00000618327 PPM1DO15297 605 aa12.92□□□□□ -0.34
CIITA-213ENST00000618327 SEC14L5O43304 696 aa12.92□□□□□ -0.34
CIITA-213ENST00000618327 GASTP01350 101 aa12.92□□□□□ -0.34
CIITA-213ENST00000618327 ZNF45Q02386 682 aa12.92□□□□□ -0.34
CIITA-213ENST00000618327 KIAA0040Q15053 153 aa12.92□□□□□ -0.34
CIITA-213ENST00000618327 DUSP7Q16829 419 aa12.92□□□□□ -0.34
CIITA-213ENST00000618327 TBRG1Q3YBR2 411 aa12.92□□□□□ -0.34
CIITA-213ENST00000618327 KLBQ86Z14 1044 aa12.92□□□□□ -0.34
CIITA-213ENST00000618327 CHDHQ8NE62 594 aaPredicted RBP12.92□□□□□ -0.34
CIITA-213ENST00000618327 THSD1Q9NS62 852 aa12.92□□□□□ -0.34
CIITA-213ENST00000618327 SLC35F4A4IF30 521 aa12.91□□□□□ -0.34
CIITA-213ENST00000618327 A6NCN8 305 aa12.91□□□□□ -0.34
CIITA-213ENST00000618327 HCRTR1O43613 425 aa12.91□□□□□ -0.34
CIITA-213ENST00000618327 MAPK3P27361 379 aaPredicted RBP12.91□□□□□ -0.34
CIITA-213ENST00000618327 GRK5P34947 590 aa12.91□□□□□ -0.34
CIITA-213ENST00000618327 DUSP5Q16690 384 aa12.91□□□□□ -0.34
CIITA-213ENST00000618327 FCRLBQ6BAA4 426 aa12.91□□□□□ -0.34
CIITA-213ENST00000618327 RAB12Q6IQ22 244 aa12.91□□□□□ -0.34
CIITA-213ENST00000618327 TMEM53Q6P2H8 277 aa12.91□□□□□ -0.34
CIITA-213ENST00000618327 LNX2Q8N448 690 aa12.91□□□□□ -0.34
CIITA-213ENST00000618327 OR7G1Q8NGA0 311 aa12.91□□□□□ -0.34
CIITA-213ENST00000618327 OR6T1Q8NGN1 323 aa12.91□□□□□ -0.34
CIITA-213ENST00000618327 GPBAR1Q8TDU6 330 aa12.91□□□□□ -0.34
CIITA-213ENST00000618327 C15orf40Q8WUR7 153 aa12.91□□□□□ -0.34
CIITA-213ENST00000618327 AKAP1Q92667 903 aaKnown RBP eCLIP12.91□□□□□ -0.34
CIITA-213ENST00000618327 DUSP22Q9NRW4 184 aa12.91□□□□□ -0.34
CIITA-213ENST00000618327 IER3IP1Q9Y5U9 82 aa12.91□□□□□ -0.34
CIITA-213ENST00000618327 A0A1W2PQF6 199 aa12.91□□□□□ -0.34
CIITA-213ENST00000618327 SMIM30A4D0T7 59 aa12.91□□□□□ -0.34
CIITA-213ENST00000618327 SERINC4A6NH21 518 aa12.91□□□□□ -0.34
CIITA-213ENST00000618327 PIAS2O75928 621 aa12.91□□□□□ -0.34
CIITA-213ENST00000618327 GIPRP48546 466 aa12.91□□□□□ -0.34
CIITA-213ENST00000618327 ZNF81P51508 661 aa12.91□□□□□ -0.34
CIITA-213ENST00000618327 NKAIN1Q4KMZ8 207 aa12.91□□□□□ -0.34
CIITA-213ENST00000618327 YOD1Q5VVQ6 348 aaPredicted RBP12.91□□□□□ -0.34
CIITA-213ENST00000618327 CARD17Q5XLA6 110 aa12.91□□□□□ -0.34
CIITA-213ENST00000618327 RNF165Q6ZSG1 346 aa12.91□□□□□ -0.34
CIITA-213ENST00000618327 MED25Q71SY5 747 aa12.91□□□□□ -0.34
CIITA-213ENST00000618327 OR51L1Q8NGJ5 315 aa12.91□□□□□ -0.34
CIITA-213ENST00000618327 OR14L1PQ8NHC6 308 aa12.91□□□□□ -0.34
CIITA-213ENST00000618327 IFI44Q8TCB0 444 aa12.91□□□□□ -0.34
CIITA-213ENST00000618327 TMEM246Q9BRR3 403 aa12.91□□□□□ -0.34
CIITA-213ENST00000618327 AMBRA1Q9C0C7 1298 aa12.91□□□□□ -0.34
CIITA-213ENST00000618327 LHPPQ9H008 270 aa12.91□□□□□ -0.34
CIITA-213ENST00000618327 TMEM185BQ9H7F4 350 aa12.91□□□□□ -0.34
CIITA-213ENST00000618327 MAB21L2Q9Y586 359 aa12.91□□□□□ -0.34
CIITA-213ENST00000618327 INMT-MINDY4F8WBC2 141 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms