RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 INTS14Q96SY0 518 aa10.01□□□□□ -0.81
CLTCL1-209ENST00000617103 INSL6Q9Y581 213 aa10.01□□□□□ -0.81
CLTCL1-209ENST00000617103 UBR1Q8IWV7 1749 aa10.01□□□□□ -0.81
CLTCL1-209ENST00000617103 MYH13Q9UKX3 1938 aa10.01□□□□□ -0.81
CLTCL1-209ENST00000617103 DRGXA6NNA5 263 aa10□□□□□ -0.81
CLTCL1-209ENST00000617103 E9PI62 339 aa10□□□□□ -0.81
CLTCL1-209ENST00000617103 DVL2O14641 736 aa10□□□□□ -0.81
CLTCL1-209ENST00000617103 URB1O60287 2271 aaKnown RBP10□□□□□ -0.81
CLTCL1-209ENST00000617103 MED6O75586 246 aa10□□□□□ -0.81
CLTCL1-209ENST00000617103 KLK3P07288 261 aaPredicted RBP10□□□□□ -0.81
CLTCL1-209ENST00000617103 FXYD4P59646 89 aa10□□□□□ -0.81
CLTCL1-209ENST00000617103 SLC35A2P78381 396 aa10□□□□□ -0.81
CLTCL1-209ENST00000617103 HOXC5Q00444 222 aa10□□□□□ -0.81
CLTCL1-209ENST00000617103 HTR4Q13639 388 aa10□□□□□ -0.81
CLTCL1-209ENST00000617103 TMEM244Q5VVB8 128 aa10□□□□□ -0.81
CLTCL1-209ENST00000617103 ZNF695Q8IW36 515 aa10□□□□□ -0.81
CLTCL1-209ENST00000617103 TSTD1Q8NFU3 115 aa10□□□□□ -0.81
CLTCL1-209ENST00000617103 ADAMTS18Q8TE60 1221 aa10□□□□□ -0.81
CLTCL1-209ENST00000617103 PPP4R1LQ9P1A2 415 aa10□□□□□ -0.81
CLTCL1-209ENST00000617103 IFT172Q9UG01 1749 aa10□□□□□ -0.81
CLTCL1-209ENST00000617103 HHLA2Q9UM44 414 aa10□□□□□ -0.81
CLTCL1-209ENST00000617103 NME7Q9Y5B8 376 aa10□□□□□ -0.81
CLTCL1-209ENST00000617103 A0A0U1RQS6 177 aa10□□□□□ -0.81
CLTCL1-209ENST00000617103 RAB19A4D1S5 217 aa10□□□□□ -0.81
CLTCL1-209ENST00000617103 PTBP1P26599 531 aaKnown RBP eCLIP10□□□□□ -0.815e-9■■■■■ 31.2
CLTCL1-209ENST00000617103 CCR7P32248 378 aa10□□□□□ -0.81
CLTCL1-209ENST00000617103 TGM4P49221 684 aa10□□□□□ -0.81
CLTCL1-209ENST00000617103 RIN1Q13671 783 aa10□□□□□ -0.81
CLTCL1-209ENST00000617103 EIF2B1Q14232 305 aaKnown RBP10□□□□□ -0.81
CLTCL1-209ENST00000617103 SYPL1Q16563 259 aa10□□□□□ -0.81
CLTCL1-209ENST00000617103 KDM4DQ6B0I6 523 aa10□□□□□ -0.81
CLTCL1-209ENST00000617103 SFXN4Q6P4A7 337 aa10□□□□□ -0.81
CLTCL1-209ENST00000617103 PXT1Q8NFP0 134 aa10□□□□□ -0.81
CLTCL1-209ENST00000617103 ASB11Q8WXH4 323 aa10□□□□□ -0.81
CLTCL1-209ENST00000617103 LIN37Q96GY3 246 aaPredicted RBP10□□□□□ -0.81
CLTCL1-209ENST00000617103 GMLQ99445 158 aa10□□□□□ -0.81
CLTCL1-209ENST00000617103 UQCC2Q9BRT2 126 aa10□□□□□ -0.81
CLTCL1-209ENST00000617103 ST6GALNAC5Q9BVH7 336 aa10□□□□□ -0.81
CLTCL1-209ENST00000617103 CNTNAP3Q9BZ76 1288 aa10□□□□□ -0.81
CLTCL1-209ENST00000617103 TCEAL2Q9H3H9 227 aaPredicted RBP10□□□□□ -0.81
CLTCL1-209ENST00000617103 CERS4Q9HA82 394 aa10□□□□□ -0.81
CLTCL1-209ENST00000617103 HHATLQ9HCP6 504 aa10□□□□□ -0.81
CLTCL1-209ENST00000617103 ZNF281Q9Y2X9 895 aa10□□□□□ -0.81
CLTCL1-209ENST00000617103 M0QZQ0 153 aa10□□□□□ -0.81
CLTCL1-209ENST00000617103 KCNK5O95279 499 aa10□□□□□ -0.81
CLTCL1-209ENST00000617103 ACRP10323 421 aa10□□□□□ -0.81
CLTCL1-209ENST00000617103 RAB3AP20336 220 aa10□□□□□ -0.81
CLTCL1-209ENST00000617103 CD70P32970 193 aa10□□□□□ -0.81
CLTCL1-209ENST00000617103 ZNF136P52737 540 aa10□□□□□ -0.81
CLTCL1-209ENST00000617103 TRA2BP62995 288 aaKnown RBP10□□□□□ -0.81
CLTCL1-209ENST00000617103 ENTPD8Q5MY95 495 aa10□□□□□ -0.81
CLTCL1-209ENST00000617103 TBPL2Q6SJ96 375 aa10□□□□□ -0.81
CLTCL1-209ENST00000617103 RNF128Q8TEB7 428 aa10□□□□□ -0.81
CLTCL1-209ENST00000617103 KHSRPQ92945 711 aaKnown RBP eCLIP10□□□□□ -0.81
CLTCL1-209ENST00000617103 PKMYT1Q99640 499 aa10□□□□□ -0.81
CLTCL1-209ENST00000617103 SLC2A4RGQ9NR83 387 aa10□□□□□ -0.81
CLTCL1-209ENST00000617103 SLC35A3Q9Y2D2 325 aa10□□□□□ -0.81
CLTCL1-209ENST00000617103 LTN1O94822 1766 aa10□□□□□ -0.81
CLTCL1-209ENST00000617103 CPED1A4D0V7 1026 aa10□□□□□ -0.81
CLTCL1-209ENST00000617103 I6L893 689 aaPredicted RBP10□□□□□ -0.81
CLTCL1-209ENST00000617103 APBB3O95704 486 aa10□□□□□ -0.81
CLTCL1-209ENST00000617103 HOXB9P17482 250 aaPredicted RBP10□□□□□ -0.81
CLTCL1-209ENST00000617103 SYN1P17600 705 aa10□□□□□ -0.81
CLTCL1-209ENST00000617103 M6PRP20645 277 aa10□□□□□ -0.81
CLTCL1-209ENST00000617103 PRKAR1BP31321 381 aa10□□□□□ -0.81
CLTCL1-209ENST00000617103 GATMP50440 423 aa10□□□□□ -0.81
CLTCL1-209ENST00000617103 NR0B1P51843 470 aaKnown RBP10□□□□□ -0.81
CLTCL1-209ENST00000617103 GLO1Q04760 184 aa10□□□□□ -0.81
CLTCL1-209ENST00000617103 GBX1Q14549 363 aa10□□□□□ -0.81
CLTCL1-209ENST00000617103 HMGN3Q15651 99 aa10□□□□□ -0.81
CLTCL1-209ENST00000617103 GGTA1PQ4G0N0 100 aa10□□□□□ -0.81
CLTCL1-209ENST00000617103 CTSL3PQ5NE16 218 aa10□□□□□ -0.81
CLTCL1-209ENST00000617103 CMTM1Q8IZ96 169 aa10□□□□□ -0.81
CLTCL1-209ENST00000617103 HORMAD2Q8N7B1 307 aa10□□□□□ -0.81
CLTCL1-209ENST00000617103 OR5AR1Q8NGP9 310 aa10□□□□□ -0.81
CLTCL1-209ENST00000617103 ST7LQ8TDW4 575 aa10□□□□□ -0.81
CLTCL1-209ENST00000617103 FYTTD1Q96QD9 318 aaKnown RBP10□□□□□ -0.81
CLTCL1-209ENST00000617103 PITHD1Q9GZP4 211 aaPredicted RBP10□□□□□ -0.81
CLTCL1-209ENST00000617103 EGLN3Q9H6Z9 239 aa10□□□□□ -0.81
CLTCL1-209ENST00000617103 FANCFQ9NPI8 374 aa10□□□□□ -0.81
CLTCL1-209ENST00000617103 ZNF223Q9UK11 482 aaPredicted RBP10□□□□□ -0.81
CLTCL1-209ENST00000617103 TRDV1A0A1B0GX56 115 aa9.99□□□□□ -0.81
CLTCL1-209ENST00000617103 SLC22A23A1A5C7 686 aa9.99□□□□□ -0.81
CLTCL1-209ENST00000617103 TRIM64A6NGJ6 449 aa9.99□□□□□ -0.81
CLTCL1-209ENST00000617103 IGLON5A6NGN9 336 aa9.99□□□□□ -0.81
CLTCL1-209ENST00000617103 TRIM64BA6NI03 449 aa9.99□□□□□ -0.81
CLTCL1-209ENST00000617103 DPM1O60762 260 aa9.99□□□□□ -0.81
CLTCL1-209ENST00000617103 CSO75390 466 aaKnown RBP9.99□□□□□ -0.81
CLTCL1-209ENST00000617103 FBXO24O75426 580 aa9.99□□□□□ -0.81
CLTCL1-209ENST00000617103 PPT1P50897 306 aa9.99□□□□□ -0.81
CLTCL1-209ENST00000617103 TLE3Q04726 772 aa9.99□□□□□ -0.81
CLTCL1-209ENST00000617103 GRM7Q14831 915 aa9.99□□□□□ -0.81
CLTCL1-209ENST00000617103 C6orf132Q5T0Z8 1188 aa9.99□□□□□ -0.81
CLTCL1-209ENST00000617103 FIGLAQ6QHK4 219 aa9.99□□□□□ -0.81
CLTCL1-209ENST00000617103 P4HA3Q7Z4N8 544 aa9.99□□□□□ -0.81
CLTCL1-209ENST00000617103 SIAH3Q8IW03 269 aa9.99□□□□□ -0.81
CLTCL1-209ENST00000617103 SORBS1Q9BX66 1292 aaKnown RBP9.99□□□□□ -0.81
CLTCL1-209ENST00000617103 SMIM3Q9BZL3 60 aa9.99□□□□□ -0.81
CLTCL1-209ENST00000617103 ACSS1Q9NUB1 689 aaPredicted RBP9.99□□□□□ -0.81
CLTCL1-209ENST00000617103 CXXC1Q9P0U4 656 aaPredicted RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms