RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-231	ENST00000616390	UCKL1	Q9NWZ5	548 aa		12.88	□□□□□ -0.35
CACNA1C-231	ENST00000616390	CLDND1	Q9NY35	253 aa		12.88	□□□□□ -0.35
CACNA1C-231	ENST00000616390	CPNE7	Q9UBL6	633 aa		12.88	□□□□□ -0.35
CACNA1C-231	ENST00000616390	SHISA3	A0PJX4	238 aa		12.88	□□□□□ -0.35
CACNA1C-231	ENST00000616390	UNC119B	A6NIH7	251 aa		12.88	□□□□□ -0.35
CACNA1C-231	ENST00000616390	C12orf71	A8MTZ7	269 aa		12.88	□□□□□ -0.35
CACNA1C-231	ENST00000616390	DYRK3	O43781	588 aa		12.88	□□□□□ -0.35
CACNA1C-231	ENST00000616390	PRKN	O60260	465 aa	Predicted RBP	12.88	□□□□□ -0.35
CACNA1C-231	ENST00000616390	RDH16	O75452	317 aa		12.88	□□□□□ -0.35
CACNA1C-231	ENST00000616390	KIAA1024L	P59773	190 aa		12.88	□□□□□ -0.35
CACNA1C-231	ENST00000616390	EEF1A1	P68104	462 aa	Known RBP	12.88	□□□□□ -0.35
CACNA1C-231	ENST00000616390	TPBG	Q13641	420 aa		12.88	□□□□□ -0.35
CACNA1C-231	ENST00000616390	DSG2	Q14126	1118 aa		12.88	□□□□□ -0.35
CACNA1C-231	ENST00000616390	ZNF628	Q5EBL2	1059 aa		12.88	□□□□□ -0.35
CACNA1C-231	ENST00000616390	RNLS	Q5VYX0	342 aa		12.88	□□□□□ -0.35
CACNA1C-231	ENST00000616390	USP53	Q70EK8	1073 aa		12.88	□□□□□ -0.35
CACNA1C-231	ENST00000616390	TAF8	Q7Z7C8	310 aa		12.88	□□□□□ -0.35
CACNA1C-231	ENST00000616390	OR4N2	Q8NGD1	307 aa		12.88	□□□□□ -0.35
CACNA1C-231	ENST00000616390	NEIL3	Q8TAT5	605 aa		12.88	□□□□□ -0.35
CACNA1C-231	ENST00000616390	TMEM239	Q8WW34	195 aa		12.88	□□□□□ -0.35
CACNA1C-231	ENST00000616390	RIPOR3	Q96MK2	946 aa		12.88	□□□□□ -0.35
CACNA1C-231	ENST00000616390	PRSS27	Q9BQR3	290 aa		12.88	□□□□□ -0.35
CACNA1C-231	ENST00000616390	PIGU	Q9H490	435 aa		12.88	□□□□□ -0.35
CACNA1C-231	ENST00000616390	SIDT1	Q9NXL6	827 aa	Known RBP	12.88	□□□□□ -0.35
CACNA1C-231	ENST00000616390	SLC39A1	Q9NY26	324 aa		12.88	□□□□□ -0.35
CACNA1C-231	ENST00000616390	CLEC1B	Q9P126	229 aa		12.88	□□□□□ -0.35
CACNA1C-231	ENST00000616390	PTGFRN	Q9P2B2	879 aa		12.88	□□□□□ -0.35
CACNA1C-231	ENST00000616390	CDH10	Q9Y6N8	788 aa		12.88	□□□□□ -0.35
CACNA1C-231	ENST00000616390	IQCM	A0A1B0GVH7	501 aa		12.87	□□□□□ -0.35
CACNA1C-231	ENST00000616390	GABRA5	P31644	462 aa		12.87	□□□□□ -0.35
CACNA1C-231	ENST00000616390	ZNF155	Q12901	538 aa	Predicted RBP	12.87	□□□□□ -0.35
CACNA1C-231	ENST00000616390	CCDC85B	Q15834	202 aa	Predicted RBP	12.87	□□□□□ -0.35
CACNA1C-231	ENST00000616390	THSD4	Q6ZMP0	1018 aa		12.87	□□□□□ -0.35
CACNA1C-231	ENST00000616390	ZNF517	Q6ZMY9	492 aa	Predicted RBP	12.87	□□□□□ -0.35
CACNA1C-231	ENST00000616390	QSOX2	Q6ZRP7	698 aa		12.87	□□□□□ -0.35
CACNA1C-231	ENST00000616390	ZNF619	Q8N2I2	560 aa		12.87	□□□□□ -0.35
CACNA1C-231	ENST00000616390	POGLUT1	Q8NBL1	392 aa		12.87	□□□□□ -0.35
CACNA1C-231	ENST00000616390	OR52L1	Q8NGH7	329 aa		12.87	□□□□□ -0.35
CACNA1C-231	ENST00000616390	OR9A4	Q8NGU2	314 aa		12.87	□□□□□ -0.35
CACNA1C-231	ENST00000616390	CD180	Q99467	661 aa		12.87	□□□□□ -0.35
CACNA1C-231	ENST00000616390	GAS2L1	Q99501	681 aa	Predicted RBP	12.87	□□□□□ -0.35
CACNA1C-231	ENST00000616390	BEX2	Q9BXY8	128 aa		12.87	□□□□□ -0.35
CACNA1C-231	ENST00000616390	MRPL39	Q9NYK5	338 aa	Known RBP	12.87	□□□□□ -0.35
CACNA1C-231	ENST00000616390	FBXL4	Q9UKA2	621 aa		12.87	□□□□□ -0.35
CACNA1C-231	ENST00000616390		A0A1B0GVC2	190 aa		12.87	□□□□□ -0.35
CACNA1C-231	ENST00000616390	TRAPPC13	A5PLN9	417 aa		12.87	□□□□□ -0.35
CACNA1C-231	ENST00000616390		A6NIN4	97 aa		12.87	□□□□□ -0.35
CACNA1C-231	ENST00000616390	GABRP	O00591	440 aa		12.87	□□□□□ -0.35
CACNA1C-231	ENST00000616390	BPNT1	O95861	308 aa		12.87	□□□□□ -0.35
CACNA1C-231	ENST00000616390	KRT8	P05787	483 aa		12.87	□□□□□ -0.35
CACNA1C-231	ENST00000616390	CSF3	P09919	207 aa		12.87	□□□□□ -0.35
CACNA1C-231	ENST00000616390	SMIM10L1	P0DMW3	83 aa		12.87	□□□□□ -0.35
CACNA1C-231	ENST00000616390	ZNF10	P21506	573 aa	Predicted RBP	12.87	□□□□□ -0.35
CACNA1C-231	ENST00000616390	DUSP8	Q13202	625 aa		12.87	□□□□□ -0.35
CACNA1C-231	ENST00000616390	C21orf62-AS1	Q17RA5	79 aa		12.87	□□□□□ -0.35
CACNA1C-231	ENST00000616390	GLRX5	Q86SX6	157 aa		12.87	□□□□□ -0.35
CACNA1C-231	ENST00000616390	GLCCI1	Q86VQ1	547 aa		12.87	□□□□□ -0.35
CACNA1C-231	ENST00000616390	CSNK1A1L	Q8N752	337 aa		12.87	□□□□□ -0.35
CACNA1C-231	ENST00000616390	TMEM99	Q8N816	258 aa		12.87	□□□□□ -0.35
CACNA1C-231	ENST00000616390	SMIM10	Q96HG1	83 aa		12.87	□□□□□ -0.35
CACNA1C-231	ENST00000616390	C19orf53	Q9UNZ5	99 aa	Predicted RBP	12.87	□□□□□ -0.35
CACNA1C-231	ENST00000616390	SPACA6	W5XKT8	324 aa		12.87	□□□□□ -0.35
CACNA1C-231	ENST00000616390	HEATR5A	Q86XA9	2040 aa		12.87	□□□□□ -0.35
CACNA1C-231	ENST00000616390	IRGM	A1A4Y4	181 aa		12.86	□□□□□ -0.35
CACNA1C-231	ENST00000616390	CENPBD1	B2RD01	187 aa		12.86	□□□□□ -0.35
CACNA1C-231	ENST00000616390	STK25	O00506	426 aa		12.86	□□□□□ -0.35
CACNA1C-231	ENST00000616390	OR10H2	O60403	315 aa		12.86	□□□□□ -0.35
CACNA1C-231	ENST00000616390	AGR2	O95994	175 aa		12.86	□□□□□ -0.35
CACNA1C-231	ENST00000616390	NOS3	P29474	1203 aa		12.86	□□□□□ -0.35
CACNA1C-231	ENST00000616390	ARFIP1	P53367	373 aa		12.86	□□□□□ -0.35
CACNA1C-231	ENST00000616390	FXYD6P3	P58550	94 aa		12.86	□□□□□ -0.35
CACNA1C-231	ENST00000616390	SCN1B	Q07699	218 aa		12.86	□□□□□ -0.35
CACNA1C-231	ENST00000616390	IL18	Q14116	193 aa		12.86	□□□□□ -0.35
CACNA1C-231	ENST00000616390	P2RY14	Q15391	338 aa		12.86	□□□□□ -0.35
CACNA1C-231	ENST00000616390	AGAP6	Q5VW22	663 aa		12.86	□□□□□ -0.35
CACNA1C-231	ENST00000616390	METTL27	Q8N6F8	245 aa	Predicted RBP	12.86	□□□□□ -0.35
CACNA1C-231	ENST00000616390	OR10Z1	Q8NGY1	313 aa		12.86	□□□□□ -0.35
CACNA1C-231	ENST00000616390	AGAP4	Q96P64	663 aa		12.86	□□□□□ -0.35
CACNA1C-231	ENST00000616390	CDCA3	Q99618	268 aa	Predicted RBP	12.86	□□□□□ -0.35
CACNA1C-231	ENST00000616390	USB1	Q9BQ65	265 aa	Known RBP	12.86	□□□□□ -0.35
CACNA1C-231	ENST00000616390	FAM60A	Q9NP50	221 aa		12.86	□□□□□ -0.35
CACNA1C-231	ENST00000616390	PILRA	Q9UKJ1	303 aa		12.86	□□□□□ -0.35
CACNA1C-231	ENST00000616390	PCOLCE2	Q9UKZ9	415 aa		12.86	□□□□□ -0.35
CACNA1C-231	ENST00000616390	TP53BP1	Q12888	1972 aa	Predicted RBP	12.86	□□□□□ -0.35
CACNA1C-231	ENST00000616390	MPDZ	O75970	2070 aa		12.86	□□□□□ -0.35
CACNA1C-231	ENST00000616390	EIPR1	Q53HC9	387 aa		12.86	□□□□□ -0.35
CACNA1C-231	ENST00000616390	MRGPRE	Q86SM8	312 aa		12.86	□□□□□ -0.35
CACNA1C-231	ENST00000616390	RAB43	Q86YS6	212 aa		12.86	□□□□□ -0.35
CACNA1C-231	ENST00000616390	CLDN22	Q8N7P3	220 aa		12.86	□□□□□ -0.35
CACNA1C-231	ENST00000616390	OR52R1	Q8NGF1	315 aa		12.86	□□□□□ -0.35
CACNA1C-231	ENST00000616390	SLC37A2	Q8TED4	501 aa		12.86	□□□□□ -0.35
CACNA1C-231	ENST00000616390	UBASH3B	Q8TF42	649 aa		12.86	□□□□□ -0.35
CACNA1C-231	ENST00000616390	CNOT9	Q92600	299 aa	Known RBP	12.86	□□□□□ -0.35
CACNA1C-231	ENST00000616390	RSC1A1	Q92681	617 aa		12.86	□□□□□ -0.35
CACNA1C-231	ENST00000616390	BPIFA2	Q96DR5	249 aa		12.86	□□□□□ -0.35
CACNA1C-231	ENST00000616390	MRPL38	Q96DV4	380 aa	Known RBP	12.86	□□□□□ -0.35
CACNA1C-231	ENST00000616390	IL21R	Q9HBE5	538 aa		12.86	□□□□□ -0.35
CACNA1C-231	ENST00000616390	KRCC1	Q9NPI7	259 aa	Predicted RBP	12.86	□□□□□ -0.35
CACNA1C-231	ENST00000616390	MRPS18A	Q9NVS2	196 aa	Known RBP	12.86	□□□□□ -0.35
CACNA1C-231	ENST00000616390	HCN3	Q9P1Z3	774 aa		12.86	□□□□□ -0.35

Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms