RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 ADH1CP00326 375 aa12.7□□□□□ -0.38
PPP4R3B-205ENST00000616288 HLA-AP01891 365 aaKnown RBP12.7□□□□□ -0.38
PPP4R3B-205ENST00000616288 C8GP07360 202 aa12.7□□□□□ -0.38
PPP4R3B-205ENST00000616288 SBK2P0C263 348 aa12.7□□□□□ -0.38
PPP4R3B-205ENST00000616288 OAZ1P54368 228 aa12.7□□□□□ -0.38
PPP4R3B-205ENST00000616288 PRSS55Q6UWB4 352 aaPredicted RBP12.7□□□□□ -0.38
PPP4R3B-205ENST00000616288 OR2W3Q7Z3T1 314 aa12.7□□□□□ -0.38
PPP4R3B-205ENST00000616288 GID4Q8IVV7 300 aa12.7□□□□□ -0.38
PPP4R3B-205ENST00000616288 THAP4Q8WY91 577 aa12.7□□□□□ -0.38
PPP4R3B-205ENST00000616288 DVL3Q92997 716 aaPredicted RBP12.7□□□□□ -0.38
PPP4R3B-205ENST00000616288 LRIG1Q96JA1 1093 aa12.7□□□□□ -0.38
PPP4R3B-205ENST00000616288 SAMD8Q96LT4 415 aa12.7□□□□□ -0.38
PPP4R3B-205ENST00000616288 SPSB2Q99619 263 aa12.7□□□□□ -0.38
PPP4R3B-205ENST00000616288 SERPINA5P05154 406 aa12.7□□□□□ -0.38
PPP4R3B-205ENST00000616288 PTHLHP12272 177 aa12.7□□□□□ -0.38
PPP4R3B-205ENST00000616288 MAOAP21397 527 aa12.7□□□□□ -0.38
PPP4R3B-205ENST00000616288 ITGB7P26010 798 aa12.7□□□□□ -0.38
PPP4R3B-205ENST00000616288 SSR2P43308 183 aa12.7□□□□□ -0.38
PPP4R3B-205ENST00000616288 PLA1AQ53H76 456 aa12.7□□□□□ -0.38
PPP4R3B-205ENST00000616288 MLIPQ5VWP3 458 aa12.7□□□□□ -0.38
PPP4R3B-205ENST00000616288 LYPLAL1Q5VWZ2 237 aa12.7□□□□□ -0.38
PPP4R3B-205ENST00000616288 SEZ6L2Q6UXD5 910 aa12.7□□□□□ -0.38
PPP4R3B-205ENST00000616288 TIPARPQ7Z3E1 657 aaKnown RBP12.7□□□□□ -0.38
PPP4R3B-205ENST00000616288 RNF180Q86T96 592 aa12.7□□□□□ -0.38
PPP4R3B-205ENST00000616288 RBM45Q8IUH3 476 aaKnown RBP12.7□□□□□ -0.38
PPP4R3B-205ENST00000616288 CD180Q99467 661 aa12.7□□□□□ -0.38
PPP4R3B-205ENST00000616288 TRMT61BQ9BVS5 477 aaKnown RBP12.7□□□□□ -0.38
PPP4R3B-205ENST00000616288 OPA3Q9H6K4 179 aa12.7□□□□□ -0.38
PPP4R3B-205ENST00000616288 FAM86C1Q9NVL1 165 aa12.7□□□□□ -0.38
PPP4R3B-205ENST00000616288 ABRACLQ9P1F3 81 aa12.7□□□□□ -0.38
PPP4R3B-205ENST00000616288 HACL1Q9UJ83 578 aa12.7□□□□□ -0.38
PPP4R3B-205ENST00000616288 ZNF208O43345 1280 aa12.69□□□□□ -0.38
PPP4R3B-205ENST00000616288 RAB3DO95716 219 aa12.69□□□□□ -0.38
PPP4R3B-205ENST00000616288 PMP2P02689 132 aa12.69□□□□□ -0.38
PPP4R3B-205ENST00000616288 GYPBP06028 91 aa12.69□□□□□ -0.38
PPP4R3B-205ENST00000616288 TACR2P21452 398 aa12.69□□□□□ -0.38
PPP4R3B-205ENST00000616288 RNF144AP50876 292 aaPredicted RBP12.69□□□□□ -0.38
PPP4R3B-205ENST00000616288 SLC25A35Q3KQZ1 300 aa12.69□□□□□ -0.38
PPP4R3B-205ENST00000616288 NHLRC3Q5JS37 347 aa12.69□□□□□ -0.38
PPP4R3B-205ENST00000616288 GAREM2Q75VX8 874 aa12.69□□□□□ -0.38
PPP4R3B-205ENST00000616288 ZNF227Q86WZ6 799 aa12.69□□□□□ -0.38
PPP4R3B-205ENST00000616288 ABHD4Q8TB40 342 aa12.69□□□□□ -0.38
PPP4R3B-205ENST00000616288 ZBTB8AQ96BR9 441 aa12.69□□□□□ -0.38
PPP4R3B-205ENST00000616288 TMEM41AQ96HV5 264 aa12.69□□□□□ -0.38
PPP4R3B-205ENST00000616288 ZNF75AQ96N20 296 aa12.69□□□□□ -0.38
PPP4R3B-205ENST00000616288 GAL3ST4Q96RP7 486 aa12.69□□□□□ -0.38
PPP4R3B-205ENST00000616288 FBRSQ9HAH7 460 aa12.69□□□□□ -0.38
PPP4R3B-205ENST00000616288 A0A1B0GUH1 482 aa12.69□□□□□ -0.38
PPP4R3B-205ENST00000616288 TMEM129A0AVI4 362 aa12.69□□□□□ -0.38
PPP4R3B-205ENST00000616288 ZNF705FA8MVS1 300 aaPredicted RBP12.69□□□□□ -0.38
PPP4R3B-205ENST00000616288 SEC14L5O43304 696 aa12.69□□□□□ -0.38
PPP4R3B-205ENST00000616288 EIF1BO60739 113 aaKnown RBP12.69□□□□□ -0.38
PPP4R3B-205ENST00000616288 ZNF821O75541 412 aaPredicted RBP12.69□□□□□ -0.38
PPP4R3B-205ENST00000616288 OR6A2O95222 327 aa12.69□□□□□ -0.38
PPP4R3B-205ENST00000616288 C22orf31O95567 290 aa12.69□□□□□ -0.38
PPP4R3B-205ENST00000616288 IFNA2P01563 188 aa12.69□□□□□ -0.38
PPP4R3B-205ENST00000616288 ZNF705DP0CH99 300 aaPredicted RBP12.69□□□□□ -0.38
PPP4R3B-205ENST00000616288 ZNF705BP0CI00 300 aaPredicted RBP12.69□□□□□ -0.38
PPP4R3B-205ENST00000616288 MGMTP16455 207 aa12.69□□□□□ -0.38
PPP4R3B-205ENST00000616288 ABCD3P28288 659 aa12.69□□□□□ -0.38
PPP4R3B-205ENST00000616288 TIA1P31483 386 aaKnown RBP eCLIP12.69□□□□□ -0.38
PPP4R3B-205ENST00000616288 EIF1P41567 113 aaKnown RBP12.69□□□□□ -0.38
PPP4R3B-205ENST00000616288 ST8SIA6P61647 398 aa12.69□□□□□ -0.38
PPP4R3B-205ENST00000616288 RPE65Q16518 533 aa12.69□□□□□ -0.38
PPP4R3B-205ENST00000616288 LINC00303Q3SY05 128 aa12.69□□□□□ -0.38
PPP4R3B-205ENST00000616288 PRRT3Q5FWE3 981 aa12.69□□□□□ -0.38
PPP4R3B-205ENST00000616288 ZNF852Q6ZMS4 543 aa12.69□□□□□ -0.38
PPP4R3B-205ENST00000616288 CALHM3Q86XJ0 350 aa12.69□□□□□ -0.38
PPP4R3B-205ENST00000616288 NAXDQ8IW45 347 aa12.69□□□□□ -0.38
PPP4R3B-205ENST00000616288 OR2AK2Q8NG84 335 aa12.69□□□□□ -0.38
PPP4R3B-205ENST00000616288 GPR150Q8NGU9 434 aa12.69□□□□□ -0.38
PPP4R3B-205ENST00000616288 OR1F2PQ96R84 312 aa12.69□□□□□ -0.38
PPP4R3B-205ENST00000616288 C5AR2Q9P296 337 aa12.69□□□□□ -0.38
PPP4R3B-205ENST00000616288 DDX60LQ5H9U9 1706 aaKnown RBP12.69□□□□□ -0.38
PPP4R3B-205ENST00000616288 TRIP11Q15643 1979 aa12.69□□□□□ -0.38
PPP4R3B-205ENST00000616288 C7orf66A4D0T2 115 aa12.69□□□□□ -0.38
PPP4R3B-205ENST00000616288 CLDN7O95471 211 aa12.69□□□□□ -0.38
PPP4R3B-205ENST00000616288 ACAA1P09110 424 aaPredicted RBP12.69□□□□□ -0.38
PPP4R3B-205ENST00000616288 ITGB8P26012 769 aa12.69□□□□□ -0.38
PPP4R3B-205ENST00000616288 PSMB10P40306 273 aa12.69□□□□□ -0.38
PPP4R3B-205ENST00000616288 CAMLGP49069 296 aa12.69□□□□□ -0.38
PPP4R3B-205ENST00000616288 SERTAD2Q14140 314 aa12.69□□□□□ -0.38
PPP4R3B-205ENST00000616288 CTXN3Q4LDR2 81 aa12.69□□□□□ -0.38
PPP4R3B-205ENST00000616288 COMMD2Q86X83 199 aa12.69□□□□□ -0.38
PPP4R3B-205ENST00000616288 GJD3Q8N144 294 aa12.69□□□□□ -0.38
PPP4R3B-205ENST00000616288 ADAM2Q99965 735 aa12.69□□□□□ -0.38
PPP4R3B-205ENST00000616288 PRR14Q9BWN1 585 aa12.69□□□□□ -0.38
PPP4R3B-205ENST00000616288 SMIM3Q9BZL3 60 aa12.69□□□□□ -0.38
PPP4R3B-205ENST00000616288 TRPV2Q9Y5S1 764 aa12.69□□□□□ -0.38
PPP4R3B-205ENST00000616288 PQLC2LA1A4F0 135 aa12.69□□□□□ -0.38
PPP4R3B-205ENST00000616288 SOCS6O14544 535 aa12.69□□□□□ -0.38
PPP4R3B-205ENST00000616288 IMPA2O14732 288 aa12.69□□□□□ -0.38
PPP4R3B-205ENST00000616288 TERTO14746 1132 aaKnown RBP12.69□□□□□ -0.38
PPP4R3B-205ENST00000616288 DCTDP32321 178 aa12.69□□□□□ -0.38
PPP4R3B-205ENST00000616288 GPR143P51810 404 aa12.69□□□□□ -0.38
PPP4R3B-205ENST00000616288 CRY2Q49AN0 593 aa12.69□□□□□ -0.38
PPP4R3B-205ENST00000616288 TPRA1Q86W33 373 aa12.69□□□□□ -0.38
PPP4R3B-205ENST00000616288 LDLRAD3Q86YD5 345 aa12.69□□□□□ -0.38
PPP4R3B-205ENST00000616288 NRMQ8IXM6 262 aa12.69□□□□□ -0.38
PPP4R3B-205ENST00000616288 KDM8Q8N371 416 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms