RNA–Protein interactions for RNA: ENST00000615901.4

SPTBN1-207, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 5 BASIC

Gene SPTBN1, Length 10,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-207ENST00000615901 OR1Q1Q15612 314 aa8.55□□□□□ -1.04
SPTBN1-207ENST00000615901 PGM2L1Q6PCE3 622 aa8.55□□□□□ -1.04
SPTBN1-207ENST00000615901 CMIPQ8IY22 773 aa8.55□□□□□ -1.04
SPTBN1-207ENST00000615901 ITPKCQ96DU7 683 aa8.55□□□□□ -1.04
SPTBN1-207ENST00000615901 KCNIP1Q9NZI2 227 aa8.55□□□□□ -1.04
SPTBN1-207ENST00000615901 KCNS2Q9ULS6 477 aa8.55□□□□□ -1.04
SPTBN1-207ENST00000615901 IER3IP1Q9Y5U9 82 aa8.55□□□□□ -1.04
SPTBN1-207ENST00000615901 TRIP12Q14669 1992 aaPredicted RBP8.55□□□□□ -1.04
SPTBN1-207ENST00000615901 SORBS2O94875 1100 aaKnown RBP8.55□□□□□ -1.04
SPTBN1-207ENST00000615901 ZNF81P51508 661 aa8.55□□□□□ -1.04
SPTBN1-207ENST00000615901 MLLT11Q13015 90 aaPredicted RBP8.55□□□□□ -1.04
SPTBN1-207ENST00000615901 C3orf38Q5JPI3 329 aa8.55□□□□□ -1.04
SPTBN1-207ENST00000615901 ENTPD8Q5MY95 495 aa8.55□□□□□ -1.04
SPTBN1-207ENST00000615901 MEPCEQ7L2J0 689 aaKnown RBP8.55□□□□□ -1.04
SPTBN1-207ENST00000615901 LRRC56Q8IYG6 542 aaPredicted RBP8.55□□□□□ -1.04
SPTBN1-207ENST00000615901 TRMT10AQ8TBZ6 339 aaKnown RBP8.55□□□□□ -1.04
SPTBN1-207ENST00000615901 GATA6Q92908 595 aa8.55□□□□□ -1.04
SPTBN1-207ENST00000615901 SNAPC3Q92966 411 aa8.55□□□□□ -1.04
SPTBN1-207ENST00000615901 HLA-CQ95604 372 aa8.55□□□□□ -1.04
SPTBN1-207ENST00000615901 MLXQ9UH92 298 aa8.55□□□□□ -1.04
SPTBN1-207ENST00000615901 UPK1BO75841 260 aa8.55□□□□□ -1.04
SPTBN1-207ENST00000615901 CSF2P04141 144 aa8.55□□□□□ -1.04
SPTBN1-207ENST00000615901 IDUAP35475 653 aa8.55□□□□□ -1.04
SPTBN1-207ENST00000615901 CNIH2Q6PI25 160 aa8.55□□□□□ -1.04
SPTBN1-207ENST00000615901 PXKQ7Z7A4 578 aa8.55□□□□□ -1.04
SPTBN1-207ENST00000615901 TPRA1Q86W33 373 aa8.55□□□□□ -1.04
SPTBN1-207ENST00000615901 FOXRED1Q96CU9 486 aaPredicted RBP8.55□□□□□ -1.04
SPTBN1-207ENST00000615901 SEMA6CQ9H3T2 930 aa8.55□□□□□ -1.04
SPTBN1-207ENST00000615901 PDFQ9HBH1 243 aa8.55□□□□□ -1.04
SPTBN1-207ENST00000615901 LYRM4Q9HD34 91 aa8.55□□□□□ -1.04
SPTBN1-207ENST00000615901 MCTS1Q9ULC4 181 aaKnown RBP8.55□□□□□ -1.04
SPTBN1-207ENST00000615901 M0R129 80 aa8.55□□□□□ -1.04
SPTBN1-207ENST00000615901 IGHG1P01857 330 aa8.55□□□□□ -1.04
SPTBN1-207ENST00000615901 STT3AP46977 705 aa8.55□□□□□ -1.04
SPTBN1-207ENST00000615901 BMXP51813 675 aa8.55□□□□□ -1.04
SPTBN1-207ENST00000615901 EMP2P54851 167 aa8.55□□□□□ -1.04
SPTBN1-207ENST00000615901 UBE2NP61088 152 aaKnown RBP8.55□□□□□ -1.04
SPTBN1-207ENST00000615901 SELPLGQ14242 412 aa8.55□□□□□ -1.04
SPTBN1-207ENST00000615901 GARNL3Q5VVW2 1013 aa8.55□□□□□ -1.04
SPTBN1-207ENST00000615901 SPARTQ8N0X7 666 aa8.55□□□□□ -1.04
SPTBN1-207ENST00000615901 ZNF709Q8N972 641 aa8.55□□□□□ -1.04
SPTBN1-207ENST00000615901 SPPL3Q8TCT6 385 aa8.55□□□□□ -1.04
SPTBN1-207ENST00000615901 LKAAEAR1Q8TD35 194 aa8.55□□□□□ -1.04
SPTBN1-207ENST00000615901 CASTOR1Q8WTX7 329 aa8.55□□□□□ -1.04
SPTBN1-207ENST00000615901 ZNF700Q9H0M5 742 aa8.55□□□□□ -1.04
SPTBN1-207ENST00000615901 KIR3DX1Q9H7L2 352 aa8.55□□□□□ -1.04
SPTBN1-207ENST00000615901 GSKIPQ9P0R6 139 aa8.55□□□□□ -1.04
SPTBN1-207ENST00000615901 SPG11Q96JI7 2443 aa8.55□□□□□ -1.04
SPTBN1-207ENST00000615901 SCN4AP35499 1836 aa8.54□□□□□ -1.04
SPTBN1-207ENST00000615901 RIF1Q5UIP0 2472 aaKnown RBP8.54□□□□□ -1.04
SPTBN1-207ENST00000615901 A0A1W2PQL4 384 aaPredicted RBP8.54□□□□□ -1.04
SPTBN1-207ENST00000615901 AQP9O43315 295 aa8.54□□□□□ -1.04
SPTBN1-207ENST00000615901 LCKP06239 509 aa8.54□□□□□ -1.04
SPTBN1-207ENST00000615901 FAM180BQ6P0A1 224 aa8.54□□□□□ -1.04
SPTBN1-207ENST00000615901 ARL14Q8N4G2 192 aa8.54□□□□□ -1.04
SPTBN1-207ENST00000615901 OR5H2Q8NGV7 314 aa8.54□□□□□ -1.04
SPTBN1-207ENST00000615901 CHTF18Q8WVB6 975 aa8.54□□□□□ -1.04
SPTBN1-207ENST00000615901 MUL1Q969V5 352 aa8.54□□□□□ -1.04
SPTBN1-207ENST00000615901 OR10A5Q9H207 317 aa8.54□□□□□ -1.04
SPTBN1-207ENST00000615901 OR10A2Q9H208 303 aa8.54□□□□□ -1.04
SPTBN1-207ENST00000615901 NUBP2Q9Y5Y2 271 aa8.54□□□□□ -1.04
SPTBN1-207ENST00000615901 SMCO3A2RU48 225 aa8.54□□□□□ -1.04
SPTBN1-207ENST00000615901 GGT3PA6NGU5 568 aa8.54□□□□□ -1.04
SPTBN1-207ENST00000615901 A6NHS1 94 aa8.54□□□□□ -1.04
SPTBN1-207ENST00000615901 H3BQ06 376 aaPredicted RBP8.54□□□□□ -1.04
SPTBN1-207ENST00000615901 SULT2B1O00204 365 aa8.54□□□□□ -1.04
SPTBN1-207ENST00000615901 SCGB2A1O75556 95 aa8.54□□□□□ -1.04
SPTBN1-207ENST00000615901 AKR1D1P51857 326 aa8.54□□□□□ -1.04
SPTBN1-207ENST00000615901 OR52D1Q9H346 318 aa8.54□□□□□ -1.04
SPTBN1-207ENST00000615901 LOC102725191A0A1B0GVB3 256 aa8.54□□□□□ -1.04
SPTBN1-207ENST00000615901 TLCD2A6NGC4 264 aa8.54□□□□□ -1.04
SPTBN1-207ENST00000615901 IL1AP01583 271 aa8.54□□□□□ -1.04
SPTBN1-207ENST00000615901 ICAM2P13598 275 aa8.54□□□□□ -1.04
SPTBN1-207ENST00000615901 ZNF35P13682 527 aa8.54□□□□□ -1.04
SPTBN1-207ENST00000615901 MEF2DQ14814 521 aa8.54□□□□□ -1.04
SPTBN1-207ENST00000615901 FAM69AQ5T7M9 428 aa8.54□□□□□ -1.04
SPTBN1-207ENST00000615901 LAS2Q8IYD9 372 aa8.54□□□□□ -1.04
SPTBN1-207ENST00000615901 OR5B2Q96R09 309 aa8.54□□□□□ -1.04
SPTBN1-207ENST00000615901 ZNF442Q9H7R0 627 aa8.54□□□□□ -1.04
SPTBN1-207ENST00000615901 LDB3O75112 727 aa8.54□□□□□ -1.04
SPTBN1-207ENST00000615901 ITGBL1O95965 494 aaPredicted RBP8.54□□□□□ -1.04
SPTBN1-207ENST00000615901 FXYD6P3P58550 94 aa8.54□□□□□ -1.04
SPTBN1-207ENST00000615901 MLF2Q15773 248 aaPredicted RBP8.54□□□□□ -1.04
SPTBN1-207ENST00000615901 RNASE10Q5GAN6 216 aaKnown RBP8.54□□□□□ -1.04
SPTBN1-207ENST00000615901 OTUD1Q5VV17 481 aaPredicted RBP8.54□□□□□ -1.04
SPTBN1-207ENST00000615901 RPL22L1Q6P5R6 122 aaKnown RBP8.54□□□□□ -1.04
SPTBN1-207ENST00000615901 FOXRED2Q8IWF2 684 aa8.54□□□□□ -1.04
SPTBN1-207ENST00000615901 ZFP41Q8N8Y5 198 aa8.54□□□□□ -1.04
SPTBN1-207ENST00000615901 ZFP90Q8TF47 636 aa8.54□□□□□ -1.04
SPTBN1-207ENST00000615901 SLC38A5Q8WUX1 472 aa8.54□□□□□ -1.04
SPTBN1-207ENST00000615901 MGAT4CQ9UBM8 478 aa8.54□□□□□ -1.04
SPTBN1-207ENST00000615901 CA5AP35218 305 aa8.54□□□□□ -1.04
SPTBN1-207ENST00000615901 GPR50Q13585 617 aa8.54□□□□□ -1.04
SPTBN1-207ENST00000615901 PTPRRQ15256 657 aa8.54□□□□□ -1.04
SPTBN1-207ENST00000615901 EIF2S3P41091 472 aaKnown RBP8.54□□□□□ -1.04
SPTBN1-207ENST00000615901 LRFN4Q6PJG9 635 aa8.54□□□□□ -1.04
SPTBN1-207ENST00000615901 TMEM184AQ6ZMB5 413 aa8.54□□□□□ -1.04
SPTBN1-207ENST00000615901 SLC15A4Q8N697 577 aa8.54□□□□□ -1.04
SPTBN1-207ENST00000615901 CACNG6Q9BXT2 260 aa8.54□□□□□ -1.04
SPTBN1-207ENST00000615901 CDH20Q9HBT6 801 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms