RNA–Protein interactions for RNA: ENST00000615665.4

SSBP2-220, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene SSBP2, Length 4,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-220ENST00000615665 C4orf36Q96KX1 117 aa13.06□□□□□ -0.32
SSBP2-220ENST00000615665 CHST8Q9H2A9 424 aa13.06□□□□□ -0.32
SSBP2-220ENST00000615665 HHATLQ9HCP6 504 aa13.06□□□□□ -0.32
SSBP2-220ENST00000615665 SIRT3Q9NTG7 399 aaPredicted RBP13.06□□□□□ -0.32
SSBP2-220ENST00000615665 NDUFB11Q9NX14 153 aa13.06□□□□□ -0.32
SSBP2-220ENST00000615665 C19orf53Q9UNZ5 99 aaPredicted RBP13.06□□□□□ -0.32
SSBP2-220ENST00000615665 C11orf98E9PRG8 122 aa13.06□□□□□ -0.32
SSBP2-220ENST00000615665 ZNF217O75362 1048 aa13.06□□□□□ -0.32
SSBP2-220ENST00000615665 GRK5P34947 590 aa13.06□□□□□ -0.32
SSBP2-220ENST00000615665 RORAP35398 523 aa13.06□□□□□ -0.32
SSBP2-220ENST00000615665 PBX2P40425 430 aa13.06□□□□□ -0.32
SSBP2-220ENST00000615665 MAP3K8P41279 467 aa13.06□□□□□ -0.32
SSBP2-220ENST00000615665 AP2S1P53680 142 aaPredicted RBP13.06□□□□□ -0.32
SSBP2-220ENST00000615665 LEG1Q6P5S2 330 aa13.06□□□□□ -0.32
SSBP2-220ENST00000615665 RLN3Q8WXF3 142 aa13.06□□□□□ -0.32
SSBP2-220ENST00000615665 HOXD1Q9GZZ0 328 aa13.06□□□□□ -0.32
SSBP2-220ENST00000615665 EFEMP2O95967 443 aa13.05□□□□□ -0.32
SSBP2-220ENST00000615665 POU2F2P09086 479 aa13.05□□□□□ -0.32
SSBP2-220ENST00000615665 GIMD1P0DJR0 217 aa13.05□□□□□ -0.32
SSBP2-220ENST00000615665 HOXD12P35452 270 aa13.05□□□□□ -0.32
SSBP2-220ENST00000615665 ARHGAP11BQ3KRB8 267 aa13.05□□□□□ -0.32
SSBP2-220ENST00000615665 KIAA0895LQ68EN5 471 aa13.05□□□□□ -0.32
SSBP2-220ENST00000615665 OR5T3Q8NGG3 340 aa13.05□□□□□ -0.32
SSBP2-220ENST00000615665 TRMT10AQ8TBZ6 339 aaKnown RBP13.05□□□□□ -0.32
SSBP2-220ENST00000615665 SP7Q8TDD2 431 aaPredicted RBP13.05□□□□□ -0.32
SSBP2-220ENST00000615665 DNAJA3Q96EY1 480 aa13.05□□□□□ -0.32
SSBP2-220ENST00000615665 SLC38A1Q9H2H9 487 aa13.05□□□□□ -0.32
SSBP2-220ENST00000615665 STOMP27105 288 aa13.05□□□□□ -0.32
SSBP2-220ENST00000615665 STARP49675 285 aa13.05□□□□□ -0.32
SSBP2-220ENST00000615665 HNRNPKP61978 463 aaKnown RBP eCLIP13.05□□□□□ -0.32
SSBP2-220ENST00000615665 PLCXD2Q0VAA5 305 aa13.05□□□□□ -0.32
SSBP2-220ENST00000615665 ERV3-1Q14264 604 aa13.05□□□□□ -0.32
SSBP2-220ENST00000615665 C12orf73Q69YU5 71 aa13.05□□□□□ -0.32
SSBP2-220ENST00000615665 OR5M3Q8NGP4 307 aa13.05□□□□□ -0.32
SSBP2-220ENST00000615665 PATE1Q8WXA2 126 aa13.05□□□□□ -0.32
SSBP2-220ENST00000615665 DAZLQ92904 295 aaKnown RBP13.05□□□□□ -0.32
SSBP2-220ENST00000615665 S100A16Q96FQ6 103 aaKnown RBP13.05□□□□□ -0.32
SSBP2-220ENST00000615665 PDCD10Q9BUL8 212 aa13.05□□□□□ -0.32
SSBP2-220ENST00000615665 PLA2G2FQ9BZM2 168 aa13.05□□□□□ -0.32
SSBP2-220ENST00000615665 DUSP22Q9NRW4 184 aa13.05□□□□□ -0.32
SSBP2-220ENST00000615665 GPATCH2Q9NW75 528 aa13.05□□□□□ -0.32
SSBP2-220ENST00000615665 WBP1LQ9NX94 342 aa13.05□□□□□ -0.32
SSBP2-220ENST00000615665 KCNE3Q9Y6H6 103 aa13.05□□□□□ -0.32
SSBP2-220ENST00000615665 HTR3EA5X5Y0 456 aa13.05□□□□□ -0.32
SSBP2-220ENST00000615665 TRIM64A6NGJ6 449 aa13.05□□□□□ -0.32
SSBP2-220ENST00000615665 ZSCAN5BA6NJL1 495 aa13.05□□□□□ -0.32
SSBP2-220ENST00000615665 NCR1O76036 304 aa13.05□□□□□ -0.32
SSBP2-220ENST00000615665 PTGS2P35354 604 aa13.05□□□□□ -0.32
SSBP2-220ENST00000615665 TGFBR2P37173 567 aa13.05□□□□□ -0.32
SSBP2-220ENST00000615665 TBC1D25Q3MII6 688 aa13.05□□□□□ -0.32
SSBP2-220ENST00000615665 PAQR7Q86WK9 346 aa13.05□□□□□ -0.32
SSBP2-220ENST00000615665 SLC35F2Q8IXU6 374 aa13.05□□□□□ -0.32
SSBP2-220ENST00000615665 C19orf47Q8N9M1 422 aaKnown RBP13.05□□□□□ -0.32
SSBP2-220ENST00000615665 IL17RCQ8NAC3 791 aa13.05□□□□□ -0.32
SSBP2-220ENST00000615665 SLC37A2Q8TED4 501 aa13.05□□□□□ -0.32
SSBP2-220ENST00000615665 AKAP1Q92667 903 aaKnown RBP eCLIP13.05□□□□□ -0.32
SSBP2-220ENST00000615665 UCN3Q969E3 161 aa13.05□□□□□ -0.32
SSBP2-220ENST00000615665 SLC25A19Q9HC21 320 aa13.05□□□□□ -0.32
SSBP2-220ENST00000615665 C12orf4Q9NQ89 552 aa13.05□□□□□ -0.32
SSBP2-220ENST00000615665 EIF3KQ9UBQ5 218 aaKnown RBP13.05□□□□□ -0.32
SSBP2-220ENST00000615665 GPN3Q9UHW5 284 aaPredicted RBP13.05□□□□□ -0.32
SSBP2-220ENST00000615665 PCDHGB2Q9Y5G2 931 aa13.05□□□□□ -0.32
SSBP2-220ENST00000615665 CHD5Q8TDI0 1954 aa13.05□□□□□ -0.32
SSBP2-220ENST00000615665 MEIOCA2RUB1 952 aa13.05□□□□□ -0.32
SSBP2-220ENST00000615665 CPED1A4D0V7 1026 aa13.05□□□□□ -0.32
SSBP2-220ENST00000615665 C17orf105B2RV13 164 aa13.05□□□□□ -0.32
SSBP2-220ENST00000615665 RNF13O43567 381 aa13.05□□□□□ -0.32
SSBP2-220ENST00000615665 SDC3O75056 442 aa13.05□□□□□ -0.32
SSBP2-220ENST00000615665 NID1P14543 1247 aa13.05□□□□□ -0.32
SSBP2-220ENST00000615665 CTXN1P60606 82 aa13.05□□□□□ -0.32
SSBP2-220ENST00000615665 SNRPD2P62316 118 aaKnown RBP13.05□□□□□ -0.32
SSBP2-220ENST00000615665 ZNF620Q6ZNG0 422 aa13.05□□□□□ -0.32
SSBP2-220ENST00000615665 KRT77Q7Z794 578 aa13.05□□□□□ -0.32
SSBP2-220ENST00000615665 ASCC1Q8N9N2 400 aaKnown RBP13.05□□□□□ -0.32
SSBP2-220ENST00000615665 LINC01565O15544 149 aa13.04□□□□□ -0.32
SSBP2-220ENST00000615665 SCO2O43819 266 aa13.04□□□□□ -0.32
SSBP2-220ENST00000615665 KDM4BO94953 1096 aa13.04□□□□□ -0.32
SSBP2-220ENST00000615665 THBS1P07996 1170 aa13.04□□□□□ -0.32
SSBP2-220ENST00000615665 FBLP22087 321 aaKnown RBP13.04□□□□□ -0.32
SSBP2-220ENST00000615665 PRPS1P60891 318 aa13.04□□□□□ -0.32
SSBP2-220ENST00000615665 ACSM3Q53FZ2 586 aa13.04□□□□□ -0.32
SSBP2-220ENST00000615665 C15orf40Q8WUR7 153 aa13.04□□□□□ -0.32
SSBP2-220ENST00000615665 HHIPQ96QV1 700 aa13.04□□□□□ -0.32
SSBP2-220ENST00000615665 CBLCQ9ULV8 474 aa13.04□□□□□ -0.32
SSBP2-220ENST00000615665 PLXNA3P51805 1871 aa13.04□□□□□ -0.32
SSBP2-220ENST00000615665 LOC105369274A0A096LPK9 316 aa13.04□□□□□ -0.32
SSBP2-220ENST00000615665 LOC102723532A0A0G2JNH3 316 aa13.04□□□□□ -0.32
SSBP2-220ENST00000615665 A0A1B0GWA3 101 aa13.04□□□□□ -0.32
SSBP2-220ENST00000615665 SRPX2O60687 465 aaPredicted RBP13.04□□□□□ -0.32
SSBP2-220ENST00000615665 SLC35E2P0CK97 266 aa13.04□□□□□ -0.32
SSBP2-220ENST00000615665 CASP3P42574 277 aa13.04□□□□□ -0.32
SSBP2-220ENST00000615665 USP53Q70EK8 1073 aa13.04□□□□□ -0.32
SSBP2-220ENST00000615665 DGLUCYQ7Z3D6 616 aa13.04□□□□□ -0.32
SSBP2-220ENST00000615665 TMEM151BQ8IW70 566 aa13.04□□□□□ -0.32
SSBP2-220ENST00000615665 OR4N4Q8N0Y3 316 aa13.04□□□□□ -0.32
SSBP2-220ENST00000615665 CELF2-AS1Q8N7Q2 184 aa13.04□□□□□ -0.32
SSBP2-220ENST00000615665 OR52N1Q8NH53 320 aa13.04□□□□□ -0.32
SSBP2-220ENST00000615665 MRGPRX1Q96LB2 322 aa13.04□□□□□ -0.32
SSBP2-220ENST00000615665 NUFIP1Q9UHK0 495 aaKnown RBP13.04□□□□□ -0.32
SSBP2-220ENST00000615665 CA14Q9ULX7 337 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms