RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 MAPK1IP1LQ8NDC0 245 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 C19orf18Q8NEA5 215 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 OR10H4Q8NGA5 316 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 OR9G4Q8NGQ1 327 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 OR13C3Q8NGS6 347 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 TEX47Q8TBZ9 253 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 MARCH1Q8TCQ1 289 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 PIH1D2Q8WWB5 315 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 GTF2H4Q92759 462 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 TOP1MTQ969P6 601 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 TSACCQ96A04 125 aaPredicted RBP2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 OTUB2Q96DC9 234 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 TM4SF19Q96DZ7 209 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 SH3YL1Q96HL8 342 aaPredicted RBP2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 DNAJC1Q96KC8 554 aaKnown RBP2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 CEP19Q96LK0 163 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 SGK494Q96LW2 274 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 JSRP1Q96MG2 331 aaPredicted RBP2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 NSMCE3Q96MG7 304 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 ZNF599Q96NL3 588 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 CASD1Q96PB1 797 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 CTRCQ99895 268 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 PSD2Q9BQI7 771 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 TRIM51Q9BSJ1 452 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 NDUFAF3Q9BU61 184 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 PARD6BQ9BYG5 372 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 TRIM9Q9C026 710 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 OPN3Q9H1Y3 402 aaPredicted RBP2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 NARFLQ9H6Q4 476 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 EGLN3Q9H6Z9 239 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 KAT8Q9H7Z6 458 aaKnown RBP2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 ANKRA2Q9H9E1 313 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 FGF22Q9HCT0 170 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 VCX3AQ9NNX9 186 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 SIX2Q9NPC8 291 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 MRPL40Q9NQ50 206 aaKnown RBP2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 ZC4H2Q9NQZ6 224 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 NANSQ9NR45 359 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 OLFML3Q9NRN5 406 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 NDE1Q9NXR1 346 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 NLGN3Q9NZ94 848 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 CD274Q9NZQ7 290 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 LNPEPQ9UIQ6 1025 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 MRTO4Q9UKD2 239 aaKnown RBP2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 B3GALT5Q9Y2C3 310 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 PRG3Q9Y2Y8 225 aaPredicted RBP2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 ROCK1Q13464 1354 aa2.27□□□□□ -2.05
HMGB1P24-202ENST00000615653 MROH7-TTC4A0A0A0MT08 1334 aa2.27□□□□□ -2.05
HMGB1P24-202ENST00000615653 STK36Q9NRP7 1315 aa2.27□□□□□ -2.05
HMGB1P24-202ENST00000615653 IGKV6D-41A0A0C4DH26 115 aa2.27□□□□□ -2.05
HMGB1P24-202ENST00000615653 A0A1W2PNV4 684 aa2.27□□□□□ -2.05
HMGB1P24-202ENST00000615653 MTMR11A4FU01 709 aa2.27□□□□□ -2.05
HMGB1P24-202ENST00000615653 RNF222A6NCQ9 220 aa2.27□□□□□ -2.05
HMGB1P24-202ENST00000615653 ZNF840PA6NDX5 716 aa2.27□□□□□ -2.05
HMGB1P24-202ENST00000615653 SHISA7A6NL88 538 aa2.27□□□□□ -2.05
HMGB1P24-202ENST00000615653 OR5K4A6NMS3 321 aa2.27□□□□□ -2.05
HMGB1P24-202ENST00000615653 A8MX80 341 aa2.27□□□□□ -2.05
HMGB1P24-202ENST00000615653 NPIPA7E9PJI5 369 aa2.27□□□□□ -2.05
HMGB1P24-202ENST00000615653 PDLIM1O00151 329 aa2.27□□□□□ -2.05
HMGB1P24-202ENST00000615653 RS1O15537 224 aa2.27□□□□□ -2.05
HMGB1P24-202ENST00000615653 SYT7O43581 403 aa2.27□□□□□ -2.05
HMGB1P24-202ENST00000615653 SCN2BO60939 215 aa2.27□□□□□ -2.05
HMGB1P24-202ENST00000615653 LRCH4O75427 683 aa2.27□□□□□ -2.05
HMGB1P24-202ENST00000615653 ATP6AP2O75787 350 aa2.27□□□□□ -2.05
HMGB1P24-202ENST00000615653 OR2J3O76001 311 aa2.27□□□□□ -2.05
HMGB1P24-202ENST00000615653 NEBLO76041 1014 aa2.27□□□□□ -2.05
HMGB1P24-202ENST00000615653 NSA2O95478 260 aaKnown RBP2.27□□□□□ -2.05
HMGB1P24-202ENST00000615653 IL6P05231 212 aa2.27□□□□□ -2.05
HMGB1P24-202ENST00000615653 SERPINA6P08185 405 aa2.27□□□□□ -2.05
HMGB1P24-202ENST00000615653 CD48P09326 243 aa2.27□□□□□ -2.05
HMGB1P24-202ENST00000615653 UBCP0CG48 685 aaKnown RBP2.27□□□□□ -2.05
HMGB1P24-202ENST00000615653 PNMA6AP0CW24 399 aaPredicted RBP2.27□□□□□ -2.05
HMGB1P24-202ENST00000615653 NPIPA8P0DM63 369 aa2.27□□□□□ -2.05
HMGB1P24-202ENST00000615653 HAPLN1P10915 354 aaPredicted RBP2.27□□□□□ -2.05
HMGB1P24-202ENST00000615653 CPN1P15169 458 aa2.27□□□□□ -2.05
HMGB1P24-202ENST00000615653 B4GALT1P15291 398 aa2.27□□□□□ -2.05
HMGB1P24-202ENST00000615653 ZNF26P17031 533 aaPredicted RBP2.27□□□□□ -2.05
HMGB1P24-202ENST00000615653 CBLP22681 906 aa2.27□□□□□ -2.05
HMGB1P24-202ENST00000615653 EPHA2P29317 976 aa2.27□□□□□ -2.05
HMGB1P24-202ENST00000615653 HNRNPH3P31942 346 aaKnown RBP2.27□□□□□ -2.05
HMGB1P24-202ENST00000615653 UGT1A5P35504 534 aa2.27□□□□□ -2.05
HMGB1P24-202ENST00000615653 UGT2B10P36537 528 aa2.27□□□□□ -2.05
HMGB1P24-202ENST00000615653 SLC26A3P40879 764 aa2.27□□□□□ -2.05
HMGB1P24-202ENST00000615653 P2RY2P41231 377 aa2.27□□□□□ -2.05
HMGB1P24-202ENST00000615653 MAGEA2P43356 314 aa2.27□□□□□ -2.05
HMGB1P24-202ENST00000615653 NPBWR2P48146 333 aa2.27□□□□□ -2.05
HMGB1P24-202ENST00000615653 NDST2P52849 883 aa2.27□□□□□ -2.05
HMGB1P24-202ENST00000615653 PLA2G16P53816 162 aa2.27□□□□□ -2.05
HMGB1P24-202ENST00000615653 EMP2P54851 167 aa2.27□□□□□ -2.05
HMGB1P24-202ENST00000615653 CLDN18P56856 261 aa2.27□□□□□ -2.05
HMGB1P24-202ENST00000615653 CD81P60033 236 aa2.27□□□□□ -2.05
HMGB1P24-202ENST00000615653 UBE2G2P60604 165 aa2.27□□□□□ -2.05
HMGB1P24-202ENST00000615653 RAB10P61026 200 aa2.27□□□□□ -2.05
HMGB1P24-202ENST00000615653 RPS18P62269 152 aaKnown RBP2.27□□□□□ -2.05
HMGB1P24-202ENST00000615653 S100A12P80511 92 aa2.27□□□□□ -2.05
HMGB1P24-202ENST00000615653 GLO1Q04760 184 aa2.27□□□□□ -2.05
HMGB1P24-202ENST00000615653 SRYQ05066 204 aa2.27□□□□□ -2.05
HMGB1P24-202ENST00000615653 GABPAQ06546 454 aa2.27□□□□□ -2.05
HMGB1P24-202ENST00000615653 KLC1Q07866 573 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms