RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 KANSL1Q7Z3B3 1105 aa17.64■□□□□ 0.41
MMP28-204ENST00000615136 RANBP3LQ86VV4 465 aaPredicted RBP17.64■□□□□ 0.41
MMP28-204ENST00000615136 CLDN22Q8N7P3 220 aa17.64■□□□□ 0.41
MMP28-204ENST00000615136 ZSCAN1Q8NBB4 408 aa17.64■□□□□ 0.41
MMP28-204ENST00000615136 TM9SF4Q92544 642 aa17.64■□□□□ 0.41
MMP28-204ENST00000615136 SLC41A2Q96JW4 573 aa17.64■□□□□ 0.41
MMP28-204ENST00000615136 PTCHD1Q96NR3 888 aa17.64■□□□□ 0.41
MMP28-204ENST00000615136 MED17Q9NVC6 651 aa17.64■□□□□ 0.41
MMP28-204ENST00000615136 ATXN7L1Q9ULK2 861 aaPredicted RBP17.64■□□□□ 0.41
MMP28-204ENST00000615136 SPIN1Q9Y657 262 aaPredicted RBP17.64■□□□□ 0.41
MMP28-204ENST00000615136 BLACEA4D250 179 aa17.64■□□□□ 0.41
MMP28-204ENST00000615136 TDGF1P13385 188 aa17.64■□□□□ 0.41
MMP28-204ENST00000615136 ARRB1P49407 418 aaPredicted RBP17.64■□□□□ 0.41
MMP28-204ENST00000615136 ZNHIT3Q15649 155 aaPredicted RBP17.64■□□□□ 0.41
MMP28-204ENST00000615136 OR2G6Q5TZ20 316 aa17.64■□□□□ 0.41
MMP28-204ENST00000615136 AADACL4Q5VUY2 407 aa17.64■□□□□ 0.41
MMP28-204ENST00000615136 PMS2CLQ68D20 193 aa17.64■□□□□ 0.41
MMP28-204ENST00000615136 PFN4Q8NHR9 129 aa17.64■□□□□ 0.41
MMP28-204ENST00000615136 PTPMT1Q8WUK0 201 aaPredicted RBP17.64■□□□□ 0.41
MMP28-204ENST00000615136 ASB15Q8WXK1 588 aa17.64■□□□□ 0.41
MMP28-204ENST00000615136 SNTG1Q9NSN8 517 aa17.64■□□□□ 0.41
MMP28-204ENST00000615136 C20orf141Q9NUB4 165 aa17.64■□□□□ 0.41
MMP28-204ENST00000615136 SF3B6Q9Y3B4 125 aaKnown RBP17.64■□□□□ 0.41
MMP28-204ENST00000615136 WDR87Q6ZQQ6 2873 aa17.63■□□□□ 0.41
MMP28-204ENST00000615136 TRAPPC13A5PLN9 417 aa17.63■□□□□ 0.41
MMP28-204ENST00000615136 C17orf105B2RV13 164 aa17.63■□□□□ 0.41
MMP28-204ENST00000615136 PRAMEF2O60811 474 aa17.63■□□□□ 0.41
MMP28-204ENST00000615136 APOL3O95236 402 aa17.63■□□□□ 0.41
MMP28-204ENST00000615136 DLGAP3O95886 979 aa17.63■□□□□ 0.41
MMP28-204ENST00000615136 LIMS3P0CW19 117 aa17.63■□□□□ 0.41
MMP28-204ENST00000615136 LIMS4P0CW20 117 aa17.63■□□□□ 0.41
MMP28-204ENST00000615136 DRD5P21918 477 aa17.63■□□□□ 0.41
MMP28-204ENST00000615136 FOXL2P58012 376 aa17.63■□□□□ 0.41
MMP28-204ENST00000615136 DEFA1P59665 94 aa17.63■□□□□ 0.41
MMP28-204ENST00000615136 DEFA3P59666 94 aa17.63■□□□□ 0.41
MMP28-204ENST00000615136 PSPHP78330 225 aa17.63■□□□□ 0.41
MMP28-204ENST00000615136 PGGHGQ32M88 737 aa17.63■□□□□ 0.41
MMP28-204ENST00000615136 PLK5Q496M5 336 aa17.63■□□□□ 0.41
MMP28-204ENST00000615136 C1orf189Q5VU69 101 aa17.63■□□□□ 0.41
MMP28-204ENST00000615136 SLC30A6Q6NXT4 461 aa17.63■□□□□ 0.41
MMP28-204ENST00000615136 ZNF574Q6ZN55 896 aaPredicted RBP17.63■□□□□ 0.41
MMP28-204ENST00000615136 LAPTM4BQ86VI4 370 aa17.63■□□□□ 0.41
MMP28-204ENST00000615136 TMEM151BQ8IW70 566 aa17.63■□□□□ 0.41
MMP28-204ENST00000615136 ZNF485Q8NCK3 441 aa17.63■□□□□ 0.41
MMP28-204ENST00000615136 RFKQ969G6 155 aa17.63■□□□□ 0.41
MMP28-204ENST00000615136 SLC25A46Q96AG3 418 aa17.63■□□□□ 0.41
MMP28-204ENST00000615136 CLIP3Q96DZ5 547 aa17.63■□□□□ 0.41
MMP28-204ENST00000615136 ATP13A2Q9NQ11 1180 aa17.63■□□□□ 0.41
MMP28-204ENST00000615136 POLE3Q9NRF9 147 aa17.63■□□□□ 0.41
MMP28-204ENST00000615136 PNO1Q9NRX1 252 aaKnown RBP17.63■□□□□ 0.41
MMP28-204ENST00000615136 FLRT3Q9NZU0 649 aa17.63■□□□□ 0.41
MMP28-204ENST00000615136 SEMA5BQ9P283 1151 aa17.63■□□□□ 0.41
MMP28-204ENST00000615136 ZNF223Q9UK11 482 aaPredicted RBP17.63■□□□□ 0.41
MMP28-204ENST00000615136 CDH10Q9Y6N8 788 aa17.63■□□□□ 0.41
MMP28-204ENST00000615136 V9GYH0 126 aa17.63■□□□□ 0.41
MMP28-204ENST00000615136 LY6G6EA0A0G2JKS1 128 aa17.62■□□□□ 0.41
MMP28-204ENST00000615136 CH25HO95992 272 aa17.62■□□□□ 0.41
MMP28-204ENST00000615136 TSPAN19P0C672 248 aa17.62■□□□□ 0.41
MMP28-204ENST00000615136 SPNP16150 400 aa17.62■□□□□ 0.41
MMP28-204ENST00000615136 EPHA8P29322 1005 aaPredicted RBP17.62■□□□□ 0.41
MMP28-204ENST00000615136 EIF2B2P49770 351 aaKnown RBP17.62■□□□□ 0.41
MMP28-204ENST00000615136 CDH11P55287 796 aa17.62■□□□□ 0.41
MMP28-204ENST00000615136 COPZ1P61923 177 aa17.62■□□□□ 0.41
MMP28-204ENST00000615136 GPLD1P80108 840 aa17.62■□□□□ 0.41
MMP28-204ENST00000615136 NDUFAF6Q330K2 333 aa17.62■□□□□ 0.41
MMP28-204ENST00000615136 VWA2Q5GFL6 755 aa17.62■□□□□ 0.41
MMP28-204ENST00000615136 GUSBP11Q6P575 273 aa17.62■□□□□ 0.41
MMP28-204ENST00000615136 TXNDC15Q96J42 360 aa17.62■□□□□ 0.41
MMP28-204ENST00000615136 FAM210AQ96ND0 272 aa17.62■□□□□ 0.41
MMP28-204ENST00000615136 TEX12Q9BXU0 123 aa17.62■□□□□ 0.41
MMP28-204ENST00000615136 U3KQA8 63 aa17.62■□□□□ 0.41
MMP28-204ENST00000615136 ADAMTS9Q9P2N4 1935 aa17.62■□□□□ 0.41
MMP28-204ENST00000615136 NPIPB9F8W1W9 429 aa17.62■□□□□ 0.41
MMP28-204ENST00000615136 PLD2O14939 933 aa17.62■□□□□ 0.41
MMP28-204ENST00000615136 MAKP20794 623 aa17.62■□□□□ 0.41
MMP28-204ENST00000615136 RUNX1T1Q06455 604 aa17.62■□□□□ 0.41
MMP28-204ENST00000615136 MAMSTRQ6ZN01 415 aa17.62■□□□□ 0.41
MMP28-204ENST00000615136 BCORP1Q8N888 145 aa17.62■□□□□ 0.41
MMP28-204ENST00000615136 GRHL3Q8TE85 626 aa17.62■□□□□ 0.41
MMP28-204ENST00000615136 HPS1Q92902 700 aa17.62■□□□□ 0.41
MMP28-204ENST00000615136 ARHGAP9Q9BRR9 750 aa17.62■□□□□ 0.41
MMP28-204ENST00000615136 MED18Q9BUE0 208 aa17.62■□□□□ 0.41
MMP28-204ENST00000615136 DPH1Q9BZG8 443 aa17.62■□□□□ 0.41
MMP28-204ENST00000615136 DNAJB12Q9NXW2 375 aaKnown RBP17.62■□□□□ 0.41
MMP28-204ENST00000615136 NLGN3Q9NZ94 848 aa17.62■□□□□ 0.41
MMP28-204ENST00000615136 PILRBQ9UKJ0 227 aa17.62■□□□□ 0.41
MMP28-204ENST00000615136 CDRT1O95170 752 aa17.61■□□□□ 0.41
MMP28-204ENST00000615136 ACAA2P42765 397 aaKnown RBP17.61■□□□□ 0.41
MMP28-204ENST00000615136 FXYD6P3P58550 94 aa17.61■□□□□ 0.41
MMP28-204ENST00000615136 QSOX2Q6ZRP7 698 aa17.61■□□□□ 0.41
MMP28-204ENST00000615136 PRSS58Q8IYP2 241 aa17.61■□□□□ 0.41
MMP28-204ENST00000615136 MAML2Q8IZL2 1156 aaPredicted RBP17.61■□□□□ 0.41
MMP28-204ENST00000615136 OR2I1PQ8NGU4 316 aa17.61■□□□□ 0.41
MMP28-204ENST00000615136 OR4C3Q8NH37 302 aa17.61■□□□□ 0.41
MMP28-204ENST00000615136 UFD1Q92890 307 aa17.61■□□□□ 0.41
MMP28-204ENST00000615136 ZNF501Q96CX3 271 aaPredicted RBP17.61■□□□□ 0.41
MMP28-204ENST00000615136 SENP5Q96HI0 755 aaPredicted RBP17.61■□□□□ 0.41
MMP28-204ENST00000615136 ENKD1Q9H0I2 346 aa17.61■□□□□ 0.41
MMP28-204ENST00000615136 KRCC1Q9NPI7 259 aaPredicted RBP17.61■□□□□ 0.41
MMP28-204ENST00000615136 ENAMQ9NRM1 1142 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms