RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 NPAS1Q99742 590 aa7.32□□□□□ -1.24
PCDH9-205ENST00000614931 OSBPL11Q9BXB4 747 aa7.32□□□□□ -1.24
PCDH9-205ENST00000614931 MFRPQ9BY79 579 aa7.32□□□□□ -1.24
PCDH9-205ENST00000614931 LAT2Q9GZY6 243 aa7.32□□□□□ -1.24
PCDH9-205ENST00000614931 STMN3Q9NZ72 180 aa7.32□□□□□ -1.24
PCDH9-205ENST00000614931 LUZP4Q9P127 313 aa7.32□□□□□ -1.24
PCDH9-205ENST00000614931 ZNF232Q9UNY5 417 aa7.32□□□□□ -1.24
PCDH9-205ENST00000614931 B3GNT3Q9Y2A9 372 aa7.32□□□□□ -1.24
PCDH9-205ENST00000614931 SLC35A3Q9Y2D2 325 aa7.32□□□□□ -1.24
PCDH9-205ENST00000614931 SLC9A8Q9Y2E8 581 aa7.32□□□□□ -1.24
PCDH9-205ENST00000614931 TESMINQ9Y4I5 508 aa7.32□□□□□ -1.24
PCDH9-205ENST00000614931 MAGED1Q9Y5V3 778 aaPredicted RBP7.32□□□□□ -1.24
PCDH9-205ENST00000614931 WIF1Q9Y5W5 379 aa7.32□□□□□ -1.24
PCDH9-205ENST00000614931 BSNQ9UPA5 3926 aa7.32□□□□□ -1.24
PCDH9-205ENST00000614931 SPTA1P02549 2419 aa7.31□□□□□ -1.24
PCDH9-205ENST00000614931 ZNF407Q9C0G0 2248 aa7.31□□□□□ -1.24
PCDH9-205ENST00000614931 LRRC3CA6NJW4 275 aa7.31□□□□□ -1.24
PCDH9-205ENST00000614931 SAC3D1A6NKF1 404 aa7.31□□□□□ -1.24
PCDH9-205ENST00000614931 TP53I11O14683 189 aa7.31□□□□□ -1.24
PCDH9-205ENST00000614931 GNB5O14775 395 aa7.31□□□□□ -1.24
PCDH9-205ENST00000614931 CASQ2O14958 399 aaPredicted RBP7.31□□□□□ -1.24
PCDH9-205ENST00000614931 ZNF264O43296 627 aa7.31□□□□□ -1.24
PCDH9-205ENST00000614931 LDLRP01130 860 aa7.31□□□□□ -1.24
PCDH9-205ENST00000614931 HPGDP15428 266 aa7.31□□□□□ -1.24
PCDH9-205ENST00000614931 RHCEP18577 417 aa7.31□□□□□ -1.24
PCDH9-205ENST00000614931 PTNP21246 168 aa7.31□□□□□ -1.24
PCDH9-205ENST00000614931 FASP25445 335 aa7.31□□□□□ -1.24
PCDH9-205ENST00000614931 PEX2P28328 305 aa7.31□□□□□ -1.24
PCDH9-205ENST00000614931 RYKP34925 604 aa7.31□□□□□ -1.24
PCDH9-205ENST00000614931 LIMS1P48059 325 aa7.31□□□□□ -1.24
PCDH9-205ENST00000614931 CYB561P49447 251 aa7.31□□□□□ -1.24
PCDH9-205ENST00000614931 LSM11P83369 360 aaKnown RBP eCLIP7.31□□□□□ -1.24
PCDH9-205ENST00000614931 SPIBQ01892 262 aa7.31□□□□□ -1.24
PCDH9-205ENST00000614931 OC90Q02509 493 aaPredicted RBP7.31□□□□□ -1.24
PCDH9-205ENST00000614931 FOXD4Q12950 439 aaPredicted RBP7.31□□□□□ -1.24
PCDH9-205ENST00000614931 PIN1Q13526 163 aaPredicted RBP7.31□□□□□ -1.24
PCDH9-205ENST00000614931 OR1Q1Q15612 314 aa7.31□□□□□ -1.24
PCDH9-205ENST00000614931 OR1C1Q15619 314 aa7.31□□□□□ -1.24
PCDH9-205ENST00000614931 PRR30Q53SZ7 412 aaPredicted RBP7.31□□□□□ -1.24
PCDH9-205ENST00000614931 ENTPD8Q5MY95 495 aa7.31□□□□□ -1.24
PCDH9-205ENST00000614931 AGAP7PQ5VUJ5 663 aa7.31□□□□□ -1.24
PCDH9-205ENST00000614931 SLC22A10Q63ZE4 541 aa7.31□□□□□ -1.24
PCDH9-205ENST00000614931 LPCAT4Q643R3 524 aa7.31□□□□□ -1.24
PCDH9-205ENST00000614931 OR2T5Q6IEZ7 315 aa7.31□□□□□ -1.24
PCDH9-205ENST00000614931 TBPL2Q6SJ96 375 aa7.31□□□□□ -1.24
PCDH9-205ENST00000614931 WDR88Q6ZMY6 472 aa7.31□□□□□ -1.24
PCDH9-205ENST00000614931 PLEKHM3Q6ZWE6 761 aa7.31□□□□□ -1.24
PCDH9-205ENST00000614931 NKAIN4Q8IVV8 208 aa7.31□□□□□ -1.24
PCDH9-205ENST00000614931 DND1Q8IYX4 353 aaKnown RBP7.31□□□□□ -1.24
PCDH9-205ENST00000614931 OFCC1Q8IZS5 231 aa7.31□□□□□ -1.24
PCDH9-205ENST00000614931 ZADH2Q8N4Q0 377 aa7.31□□□□□ -1.24
PCDH9-205ENST00000614931 FAM26EQ8N5C1 309 aa7.31□□□□□ -1.24
PCDH9-205ENST00000614931 TMCO5AQ8N6Q1 288 aa7.31□□□□□ -1.24
PCDH9-205ENST00000614931 FADS6Q8N9I5 356 aa7.31□□□□□ -1.24
PCDH9-205ENST00000614931 WDSUB1Q8N9V3 476 aa7.31□□□□□ -1.24
PCDH9-205ENST00000614931 PSD4Q8NDX1 1056 aa7.31□□□□□ -1.24
PCDH9-205ENST00000614931 PIK3C3Q8NEB9 887 aa7.31□□□□□ -1.24
PCDH9-205ENST00000614931 CATSPER1Q8NEC5 780 aa7.31□□□□□ -1.24
PCDH9-205ENST00000614931 OR2M3Q8NG83 312 aa7.31□□□□□ -1.24
PCDH9-205ENST00000614931 OR2T29Q8NH02 315 aa7.31□□□□□ -1.24
PCDH9-205ENST00000614931 DUSP19Q8WTR2 217 aa7.31□□□□□ -1.24
PCDH9-205ENST00000614931 TM9SF4Q92544 642 aa7.31□□□□□ -1.24
PCDH9-205ENST00000614931 POP5Q969H6 163 aaKnown RBP7.31□□□□□ -1.24
PCDH9-205ENST00000614931 PRRC1Q96M27 445 aa7.31□□□□□ -1.24
PCDH9-205ENST00000614931 FRMD6Q96NE9 622 aa7.31□□□□□ -1.24
PCDH9-205ENST00000614931 AGAP4Q96P64 663 aa7.31□□□□□ -1.24
PCDH9-205ENST00000614931 SECISBP2Q96T21 854 aaKnown RBP7.31□□□□□ -1.24
PCDH9-205ENST00000614931 PIP5K1AQ99755 562 aa7.31□□□□□ -1.24
PCDH9-205ENST00000614931 FUZQ9BT04 418 aa7.31□□□□□ -1.24
PCDH9-205ENST00000614931 ANGPTL4Q9BY76 406 aa7.31□□□□□ -1.24
PCDH9-205ENST00000614931 METTL7AQ9H8H3 244 aa7.31□□□□□ -1.24
PCDH9-205ENST00000614931 CACYBPQ9HB71 228 aaKnown RBP7.31□□□□□ -1.24
PCDH9-205ENST00000614931 EXOSC3Q9NQT5 275 aaKnown RBP7.31□□□□□ -1.24
PCDH9-205ENST00000614931 ACER3Q9NUN7 267 aa7.31□□□□□ -1.24
PCDH9-205ENST00000614931 KLHL28Q9NXS3 571 aa7.31□□□□□ -1.24
PCDH9-205ENST00000614931 KLRF1Q9NZS2 232 aa7.31□□□□□ -1.24
PCDH9-205ENST00000614931 MED11Q9P086 117 aa7.31□□□□□ -1.24
PCDH9-205ENST00000614931 PPP4R1LQ9P1A2 415 aa7.31□□□□□ -1.24
PCDH9-205ENST00000614931 LRFN1Q9P244 771 aa7.31□□□□□ -1.24
PCDH9-205ENST00000614931 DNAJB9Q9UBS3 223 aa7.31□□□□□ -1.24
PCDH9-205ENST00000614931 TESQ9UGI8 421 aaKnown RBP7.31□□□□□ -1.24
PCDH9-205ENST00000614931 FBXL2Q9UKC9 423 aa7.31□□□□□ -1.24
PCDH9-205ENST00000614931 SLC13A4Q9UKG4 626 aa7.31□□□□□ -1.24
PCDH9-205ENST00000614931 ICAM5Q9UMF0 924 aa7.31□□□□□ -1.24
PCDH9-205ENST00000614931 LYVE1Q9Y5Y7 322 aa7.31□□□□□ -1.24
PCDH9-205ENST00000614931 U3KQV3 271 aa7.31□□□□□ -1.24
PCDH9-205ENST00000614931 DNAJC13O75165 2243 aa7.31□□□□□ -1.24
PCDH9-205ENST00000614931 IGLV3-32A0A0A0MS00 114 aa7.3□□□□□ -1.24
PCDH9-205ENST00000614931 A0A0B4J2E0 115 aa7.3□□□□□ -1.24
PCDH9-205ENST00000614931 TRBV4-1A0A0J9YWV2 114 aa7.3□□□□□ -1.24
PCDH9-205ENST00000614931 A0A1B0GWA3 101 aa7.3□□□□□ -1.24
PCDH9-205ENST00000614931 A0A1B0GX12 115 aa7.3□□□□□ -1.24
PCDH9-205ENST00000614931 OR5H15A6NDH6 313 aa7.3□□□□□ -1.24
PCDH9-205ENST00000614931 SHISA8B8ZZ34 492 aa7.3□□□□□ -1.24
PCDH9-205ENST00000614931 PDLIM1O00151 329 aa7.3□□□□□ -1.24
PCDH9-205ENST00000614931 GTPBP1O00178 669 aaKnown RBP7.3□□□□□ -1.24
PCDH9-205ENST00000614931 SNPHO15079 494 aa7.3□□□□□ -1.24
PCDH9-205ENST00000614931 HCRTR2O43614 444 aa7.3□□□□□ -1.24
PCDH9-205ENST00000614931 CDC40O60508 579 aaKnown RBP eCLIP7.3□□□□□ -1.24
PCDH9-205ENST00000614931 EIF4E2O60573 245 aaKnown RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms