RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 UBL3O95164 117 aa20.38■□□□□ 0.85
POLR2J3-220ENST00000613744 DHPSP49366 369 aaPredicted RBP20.38■□□□□ 0.85
POLR2J3-220ENST00000613744 RPS13P62277 151 aaKnown RBP20.38■□□□□ 0.85
POLR2J3-220ENST00000613744 AGERQ15109 404 aa20.38■□□□□ 0.85
POLR2J3-220ENST00000613744 ZMYND11Q15326 602 aa20.38■□□□□ 0.85
POLR2J3-220ENST00000613744 TRAM1Q15629 374 aa20.38■□□□□ 0.85
POLR2J3-220ENST00000613744 VASNQ6EMK4 673 aa20.38■□□□□ 0.85
POLR2J3-220ENST00000613744 MED27Q6P2C8 311 aa20.38■□□□□ 0.85
POLR2J3-220ENST00000613744 SAMD12Q8N8I0 201 aa20.38■□□□□ 0.85
POLR2J3-220ENST00000613744 CADM4Q8NFZ8 388 aa20.38■□□□□ 0.85
POLR2J3-220ENST00000613744 OR4K5Q8NGD3 323 aa20.38■□□□□ 0.85
POLR2J3-220ENST00000613744 C16orf78Q8WTQ4 265 aa20.38■□□□□ 0.85
POLR2J3-220ENST00000613744 YIPF5Q969M3 257 aa20.38■□□□□ 0.85
POLR2J3-220ENST00000613744 ABHD1Q96SE0 405 aa20.38■□□□□ 0.85
POLR2J3-220ENST00000613744 ORAI3Q9BRQ5 295 aa20.38■□□□□ 0.85
POLR2J3-220ENST00000613744 TMEM5Q9Y2B1 443 aa20.38■□□□□ 0.85
POLR2J3-220ENST00000613744 FRYLO94915 3013 aa20.38■□□□□ 0.85
POLR2J3-220ENST00000613744 C2orf92A0A1B0GVN3 265 aa20.38■□□□□ 0.85
POLR2J3-220ENST00000613744 AIPO00170 330 aa20.38■□□□□ 0.85
POLR2J3-220ENST00000613744 ZNF593O00488 134 aaPredicted RBP20.38■□□□□ 0.85
POLR2J3-220ENST00000613744 NMBP08949 121 aa20.38■□□□□ 0.85
POLR2J3-220ENST00000613744 ATP1B2P14415 290 aaPredicted RBP20.38■□□□□ 0.85
POLR2J3-220ENST00000613744 CD79BP40259 229 aa20.38■□□□□ 0.85
POLR2J3-220ENST00000613744 RASSF6Q6ZTQ3 369 aa20.38■□□□□ 0.85
POLR2J3-220ENST00000613744 LHFPL3Q86UP9 236 aa20.38■□□□□ 0.85
POLR2J3-220ENST00000613744 VRK3Q8IV63 474 aa20.38■□□□□ 0.85
POLR2J3-220ENST00000613744 SIAH3Q8IW03 269 aa20.38■□□□□ 0.85
POLR2J3-220ENST00000613744 NAXDQ8IW45 347 aa20.38■□□□□ 0.85
POLR2J3-220ENST00000613744 SPICQ8N5J4 248 aa20.38■□□□□ 0.85
POLR2J3-220ENST00000613744 CLRN3Q8NCR9 226 aa20.38■□□□□ 0.85
POLR2J3-220ENST00000613744 SCARB1Q8WTV0 552 aa20.38■□□□□ 0.85
POLR2J3-220ENST00000613744 TMEM19Q96HH6 336 aa20.38■□□□□ 0.85
POLR2J3-220ENST00000613744 AHCYL2Q96HN2 611 aaKnown RBP20.38■□□□□ 0.85
POLR2J3-220ENST00000613744 BMFQ96LC9 184 aa20.38■□□□□ 0.85
POLR2J3-220ENST00000613744 ZNF649Q9BS31 505 aa20.38■□□□□ 0.85
POLR2J3-220ENST00000613744 MVB12BQ9H7P6 319 aa20.38■□□□□ 0.85
POLR2J3-220ENST00000613744 PTGFRNQ9P2B2 879 aa20.38■□□□□ 0.85
POLR2J3-220ENST00000613744 R4GN57 208 aa20.38■□□□□ 0.85
POLR2J3-220ENST00000613744 PLSCR5A0PG75 271 aa20.37■□□□□ 0.85
POLR2J3-220ENST00000613744 RNF13O43567 381 aa20.37■□□□□ 0.85
POLR2J3-220ENST00000613744 GSTZ1O43708 216 aaPredicted RBP20.37■□□□□ 0.85
POLR2J3-220ENST00000613744 PEX14O75381 377 aa20.37■□□□□ 0.85
POLR2J3-220ENST00000613744 UBXN7O94888 489 aa20.37■□□□□ 0.85
POLR2J3-220ENST00000613744 BCHEP06276 602 aa20.37■□□□□ 0.85
POLR2J3-220ENST00000613744 AKT2P31751 481 aa20.37■□□□□ 0.85
POLR2J3-220ENST00000613744 CDH11P55287 796 aa20.37■□□□□ 0.85
POLR2J3-220ENST00000613744 TCTE1Q5JU00 501 aa20.37■□□□□ 0.85
POLR2J3-220ENST00000613744 LRFN4Q6PJG9 635 aa20.37■□□□□ 0.85
POLR2J3-220ENST00000613744 COMMD6Q7Z4G1 85 aa20.37■□□□□ 0.85
POLR2J3-220ENST00000613744 BVESQ8NE79 360 aa20.37■□□□□ 0.85
POLR2J3-220ENST00000613744 FNDC11Q9BVV2 318 aa20.37■□□□□ 0.85
POLR2J3-220ENST00000613744 SAP130Q9H0E3 1048 aa20.37■□□□□ 0.85
POLR2J3-220ENST00000613744 DUSP15Q9H1R2 295 aaPredicted RBP20.37■□□□□ 0.85
POLR2J3-220ENST00000613744 METTL17Q9H7H0 456 aaPredicted RBP20.37■□□□□ 0.85
POLR2J3-220ENST00000613744 MED17Q9NVC6 651 aa20.37■□□□□ 0.85
POLR2J3-220ENST00000613744 FAM8A1Q9UBU6 413 aa20.37■□□□□ 0.85
POLR2J3-220ENST00000613744 ZNF318Q5VUA4 2279 aa20.37■□□□□ 0.85
POLR2J3-220ENST00000613744 PCP4L1A6NKN8 68 aa20.36■□□□□ 0.85
POLR2J3-220ENST00000613744 OR5K4A6NMS3 321 aa20.36■□□□□ 0.85
POLR2J3-220ENST00000613744 PTP4A3O75365 173 aa20.36■□□□□ 0.85
POLR2J3-220ENST00000613744 TMEM115Q12893 351 aaPredicted RBP20.36■□□□□ 0.85
POLR2J3-220ENST00000613744 ZNF528Q3MIS6 628 aa20.36■□□□□ 0.85
POLR2J3-220ENST00000613744 RPS26P11Q5JNZ5 115 aaPredicted RBP20.36■□□□□ 0.85
POLR2J3-220ENST00000613744 NR2C2APQ86WQ0 139 aa20.36■□□□□ 0.85
POLR2J3-220ENST00000613744 FOPNLQ96NB1 174 aa20.36■□□□□ 0.85
POLR2J3-220ENST00000613744 OR2AG1Q9H205 316 aa20.36■□□□□ 0.85
POLR2J3-220ENST00000613744 FN3KQ9H479 309 aa20.36■□□□□ 0.85
POLR2J3-220ENST00000613744 PRAMEF26H0Y7S4 382 aa20.36■□□□□ 0.85
POLR2J3-220ENST00000613744 L7N2F9 121 aa20.36■□□□□ 0.85
POLR2J3-220ENST00000613744 CTDSPLO15194 276 aa20.36■□□□□ 0.85
POLR2J3-220ENST00000613744 FZD7O75084 574 aa20.36■□□□□ 0.85
POLR2J3-220ENST00000613744 APOL3O95236 402 aa20.36■□□□□ 0.85
POLR2J3-220ENST00000613744 GIPP09681 153 aaPredicted RBP20.36■□□□□ 0.85
POLR2J3-220ENST00000613744 IFNGR2P38484 337 aa20.36■□□□□ 0.85
POLR2J3-220ENST00000613744 SRP9P49458 86 aaKnown RBP20.36■□□□□ 0.85
POLR2J3-220ENST00000613744 FAM69AQ5T7M9 428 aa20.36■□□□□ 0.85
POLR2J3-220ENST00000613744 AGTRAPQ6RW13 159 aa20.36■□□□□ 0.85
POLR2J3-220ENST00000613744 SMARCD3Q6STE5 483 aa20.36■□□□□ 0.85
POLR2J3-220ENST00000613744 ZNF322Q6U7Q0 402 aaPredicted RBP20.36■□□□□ 0.85
POLR2J3-220ENST00000613744 KANSL1Q7Z3B3 1105 aa20.36■□□□□ 0.85
POLR2J3-220ENST00000613744 MORN4Q8NDC4 146 aa20.36■□□□□ 0.85
POLR2J3-220ENST00000613744 WDR48Q8TAF3 677 aa20.36■□□□□ 0.85
POLR2J3-220ENST00000613744 GNPDA2Q8TDQ7 276 aa20.36■□□□□ 0.85
POLR2J3-220ENST00000613744 SPRYD4Q8WW59 207 aaPredicted RBP20.36■□□□□ 0.85
POLR2J3-220ENST00000613744 FOXJ1Q92949 421 aa20.36■□□□□ 0.85
POLR2J3-220ENST00000613744 FAIM2Q9BWQ8 316 aa20.36■□□□□ 0.85
POLR2J3-220ENST00000613744 WDR26Q9H7D7 661 aa20.36■□□□□ 0.85
POLR2J3-220ENST00000613744 RPS6KB2Q9UBS0 482 aa20.36■□□□□ 0.85
POLR2J3-220ENST00000613744 COPS3Q9UNS2 423 aa20.36■□□□□ 0.85
POLR2J3-220ENST00000613744 CCDC88CQ9P219 2028 aa20.35■□□□□ 0.85
POLR2J3-220ENST00000613744 HMGN1P05114 100 aa20.35■□□□□ 0.85
POLR2J3-220ENST00000613744 CD27P26842 260 aa20.35■□□□□ 0.85
POLR2J3-220ENST00000613744 HOXA1P49639 335 aaPredicted RBP20.35■□□□□ 0.85
POLR2J3-220ENST00000613744 CDK3Q00526 305 aa20.35■□□□□ 0.85
POLR2J3-220ENST00000613744 METTL11BQ5VVY1 283 aa20.35■□□□□ 0.85
POLR2J3-220ENST00000613744 PMS2CLQ68D20 193 aa20.35■□□□□ 0.85
POLR2J3-220ENST00000613744 SFXN4Q6P4A7 337 aa20.35■□□□□ 0.85
POLR2J3-220ENST00000613744 FAM83HQ6ZRV2 1179 aaPredicted RBP20.35■□□□□ 0.85
POLR2J3-220ENST00000613744 HORMAD2Q8N7B1 307 aa20.35■□□□□ 0.85
POLR2J3-220ENST00000613744 RASGEF1AQ8N9B8 481 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms