RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 RFKQ969G6 155 aa13.01□□□□□ -0.33
PCDHGA3-202ENST00000612467 MSLNLQ96KJ4 702 aa13.01□□□□□ -0.33
PCDHGA3-202ENST00000612467 MAP3K3Q99759 626 aa13.01□□□□□ -0.33
PCDHGA3-202ENST00000612467 CCDC32Q9BV29 185 aa13.01□□□□□ -0.33
PCDHGA3-202ENST00000612467 ALG8Q9BVK2 526 aa13.01□□□□□ -0.33
PCDHGA3-202ENST00000612467 BEX2Q9BXY8 128 aa13.01□□□□□ -0.33
PCDHGA3-202ENST00000612467 TWSG1Q9GZX9 223 aa13.01□□□□□ -0.33
PCDHGA3-202ENST00000612467 RNF32Q9H0A6 362 aa13.01□□□□□ -0.33
PCDHGA3-202ENST00000612467 WSB2Q9NYS7 404 aaPredicted RBP13.01□□□□□ -0.33
PCDHGA3-202ENST00000612467 TMEM184BQ9Y519 407 aaPredicted RBP13.01□□□□□ -0.33
PCDHGA3-202ENST00000612467 GMFGO60234 142 aa13.01□□□□□ -0.33
PCDHGA3-202ENST00000612467 THBS1P07996 1170 aa13.01□□□□□ -0.33
PCDHGA3-202ENST00000612467 BMP7P18075 431 aa13.01□□□□□ -0.33
PCDHGA3-202ENST00000612467 S1PR1P21453 382 aa13.01□□□□□ -0.33
PCDHGA3-202ENST00000612467 ZNF10P21506 573 aaPredicted RBP13.01□□□□□ -0.33
PCDHGA3-202ENST00000612467 DSG2Q14126 1118 aa13.01□□□□□ -0.33
PCDHGA3-202ENST00000612467 ZNF267Q14586 743 aaPredicted RBP13.01□□□□□ -0.33
PCDHGA3-202ENST00000612467 EXOSC6Q5RKV6 272 aaKnown RBP13.01□□□□□ -0.33
PCDHGA3-202ENST00000612467 CNIH2Q6PI25 160 aa13.01□□□□□ -0.33
PCDHGA3-202ENST00000612467 ARL9Q6T311 187 aa13.01□□□□□ -0.33
PCDHGA3-202ENST00000612467 NPSR1Q6W5P4 371 aa13.01□□□□□ -0.33
PCDHGA3-202ENST00000612467 ZDHHC1Q8WTX9 485 aa13.01□□□□□ -0.33
PCDHGA3-202ENST00000612467 CTHRC1Q96CG8 243 aa13.01□□□□□ -0.33
PCDHGA3-202ENST00000612467 ITPKCQ96DU7 683 aa13.01□□□□□ -0.33
PCDHGA3-202ENST00000612467 FBRSQ9HAH7 460 aa13.01□□□□□ -0.33
PCDHGA3-202ENST00000612467 B3GAT2Q9NPZ5 323 aa13.01□□□□□ -0.33
PCDHGA3-202ENST00000612467 DUSP22Q9NRW4 184 aa13.01□□□□□ -0.33
PCDHGA3-202ENST00000612467 POT1Q9NUX5 634 aa13.01□□□□□ -0.33
PCDHGA3-202ENST00000612467 LRIT1Q9P2V4 623 aa13.01□□□□□ -0.33
PCDHGA3-202ENST00000612467 MMP17Q9ULZ9 603 aa13.01□□□□□ -0.33
PCDHGA3-202ENST00000612467 SIGLEC7Q9Y286 467 aa13.01□□□□□ -0.33
PCDHGA3-202ENST00000612467 EXOGQ9Y2C4 368 aaKnown RBP13.01□□□□□ -0.33
PCDHGA3-202ENST00000612467 SPTY2D1-AS1A0A0U1RR47 76 aa13□□□□□ -0.33
PCDHGA3-202ENST00000612467 AGR2O95994 175 aa13□□□□□ -0.33
PCDHGA3-202ENST00000612467 IGHA1P01876 353 aa13□□□□□ -0.33
PCDHGA3-202ENST00000612467 CHRNB1P11230 501 aa13□□□□□ -0.33
PCDHGA3-202ENST00000612467 PAICSP22234 425 aaKnown RBP13□□□□□ -0.33
PCDHGA3-202ENST00000612467 MAP3K8P41279 467 aa13□□□□□ -0.33
PCDHGA3-202ENST00000612467 EIPR1Q53HC9 387 aa13□□□□□ -0.33
PCDHGA3-202ENST00000612467 LYPD4Q6UWN0 246 aa13□□□□□ -0.33
PCDHGA3-202ENST00000612467 SYT9Q86SS6 491 aa13□□□□□ -0.33
PCDHGA3-202ENST00000612467 C17orf47Q8NEP4 570 aa13□□□□□ -0.33
PCDHGA3-202ENST00000612467 OR52L1Q8NGH7 329 aa13□□□□□ -0.33
PCDHGA3-202ENST00000612467 LRRC61Q9BV99 259 aa13□□□□□ -0.33
PCDHGA3-202ENST00000612467 GSDMCQ9BYG8 508 aa13□□□□□ -0.33
PCDHGA3-202ENST00000612467 PRRG3Q9BZD7 231 aa13□□□□□ -0.33
PCDHGA3-202ENST00000612467 TRAPPC4Q9Y296 219 aa13□□□□□ -0.33
PCDHGA3-202ENST00000612467 SPACA6W5XKT8 324 aa13□□□□□ -0.33
PCDHGA3-202ENST00000612467 C17orf51A8MQB3 221 aa13□□□□□ -0.33
PCDHGA3-202ENST00000612467 J3QRE1 110 aa13□□□□□ -0.33
PCDHGA3-202ENST00000612467 SERPINI2O75830 405 aa13□□□□□ -0.33
PCDHGA3-202ENST00000612467 CCNKO75909 580 aa13□□□□□ -0.33
PCDHGA3-202ENST00000612467 ACVR1BP36896 505 aa13□□□□□ -0.33
PCDHGA3-202ENST00000612467 OR10A3P58181 314 aa13□□□□□ -0.33
PCDHGA3-202ENST00000612467 YPEL5P62699 121 aa13□□□□□ -0.33
PCDHGA3-202ENST00000612467 SLC3A1Q07837 685 aa13□□□□□ -0.33
PCDHGA3-202ENST00000612467 CRYZQ08257 329 aaKnown RBP13□□□□□ -0.33
PCDHGA3-202ENST00000612467 AMZ1Q400G9 498 aa13□□□□□ -0.33
PCDHGA3-202ENST00000612467 DDI2Q5TDH0 399 aa13□□□□□ -0.33
PCDHGA3-202ENST00000612467 PRPF38BQ5VTL8 546 aaKnown RBP13□□□□□ -0.33
PCDHGA3-202ENST00000612467 RSBN1Q5VWQ0 802 aaPredicted RBP13□□□□□ -0.33
PCDHGA3-202ENST00000612467 SAMD14Q8IZD0 417 aaPredicted RBP13□□□□□ -0.33
PCDHGA3-202ENST00000612467 ZNRF4Q8WWF5 429 aa13□□□□□ -0.33
PCDHGA3-202ENST00000612467 ATF6BQ99941 703 aa13□□□□□ -0.33
PCDHGA3-202ENST00000612467 KLHDC3Q9BQ90 382 aa13□□□□□ -0.33
PCDHGA3-202ENST00000612467 FOLH1BQ9HBA9 442 aa13□□□□□ -0.33
PCDHGA3-202ENST00000612467 MAU2Q9Y6X3 613 aa13□□□□□ -0.33
PCDHGA3-202ENST00000612467 THADAQ6YHU6 1953 aa13□□□□□ -0.33
PCDHGA3-202ENST00000612467 PRAMEF26H0Y7S4 382 aa12.99□□□□□ -0.33
PCDHGA3-202ENST00000612467 GSTT2P0CG29 244 aa12.99□□□□□ -0.33
PCDHGA3-202ENST00000612467 GSTT2BP0CG30 244 aa12.99□□□□□ -0.33
PCDHGA3-202ENST00000612467 RABIFP47224 123 aa12.99□□□□□ -0.33
PCDHGA3-202ENST00000612467 CTBP2P56545 445 aa12.99□□□□□ -0.33
PCDHGA3-202ENST00000612467 OR12D2P58182 307 aa12.99□□□□□ -0.33
PCDHGA3-202ENST00000612467 MEPCEQ7L2J0 689 aaKnown RBP12.99□□□□□ -0.33
PCDHGA3-202ENST00000612467 OOSP2Q86WS3 158 aa12.99□□□□□ -0.33
PCDHGA3-202ENST00000612467 MCATQ8IVS2 390 aaKnown RBP12.99□□□□□ -0.33
PCDHGA3-202ENST00000612467 CLDN22Q8N7P3 220 aa12.99□□□□□ -0.33
PCDHGA3-202ENST00000612467 RCBTB1Q8NDN9 531 aa12.99□□□□□ -0.33
PCDHGA3-202ENST00000612467 SDR9C7Q8NEX9 313 aa12.99□□□□□ -0.33
PCDHGA3-202ENST00000612467 BRIX1Q8TDN6 353 aaKnown RBP12.99□□□□□ -0.33
PCDHGA3-202ENST00000612467 WDFY2Q96P53 400 aa12.99□□□□□ -0.33
PCDHGA3-202ENST00000612467 ZNF559Q9BR84 538 aa12.99□□□□□ -0.33
PCDHGA3-202ENST00000612467 ZNF346Q9UL40 294 aaKnown RBP12.99□□□□□ -0.33
PCDHGA3-202ENST00000612467 GSTK1Q9Y2Q3 226 aa12.99□□□□□ -0.33
PCDHGA3-202ENST00000612467 MED31Q9Y3C7 131 aa12.99□□□□□ -0.33
PCDHGA3-202ENST00000612467 ADAM18Q9Y3Q7 739 aa12.99□□□□□ -0.33
PCDHGA3-202ENST00000612467 A0A087WV62 115 aa12.99□□□□□ -0.33
PCDHGA3-202ENST00000612467 TRDV1A0A1B0GX56 115 aa12.99□□□□□ -0.33
PCDHGA3-202ENST00000612467 A6NL46 340 aa12.99□□□□□ -0.33
PCDHGA3-202ENST00000612467 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.99□□□□□ -0.33
PCDHGA3-202ENST00000612467 POLR1CO15160 346 aaPredicted RBP12.99□□□□□ -0.33
PCDHGA3-202ENST00000612467 PLA2G10O15496 165 aa12.99□□□□□ -0.33
PCDHGA3-202ENST00000612467 FOXS1O43638 330 aa12.99□□□□□ -0.33
PCDHGA3-202ENST00000612467 AKAP8O43823 692 aaKnown RBP12.99□□□□□ -0.33
PCDHGA3-202ENST00000612467 SHC1P29353 583 aa12.99□□□□□ -0.33
PCDHGA3-202ENST00000612467 ACAA2P42765 397 aaKnown RBP12.99□□□□□ -0.33
PCDHGA3-202ENST00000612467 GFERP55789 205 aa12.99□□□□□ -0.33
PCDHGA3-202ENST00000612467 RAB38P57729 211 aa12.99□□□□□ -0.33
PCDHGA3-202ENST00000612467 COPZ1P61923 177 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms