RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 SLC9A3R2Q15599 337 aa8.28□□□□□ -1.08
COMMD3-215ENST00000602574 ST3GAL2Q16842 350 aa8.28□□□□□ -1.08
COMMD3-215ENST00000602574 NAPEPLDQ6IQ20 393 aa8.28□□□□□ -1.08
COMMD3-215ENST00000602574 DPY19L2P2Q6ZN68 376 aa8.28□□□□□ -1.08
COMMD3-215ENST00000602574 TMEM135Q86UB9 458 aa8.28□□□□□ -1.08
COMMD3-215ENST00000602574 PARGQ86W56 976 aa8.28□□□□□ -1.08
COMMD3-215ENST00000602574 CATSPERDQ86XM0 798 aa8.28□□□□□ -1.08
COMMD3-215ENST00000602574 FOXRED2Q8IWF2 684 aa8.28□□□□□ -1.08
COMMD3-215ENST00000602574 OR10AD1Q8NGE0 317 aa8.28□□□□□ -1.08
COMMD3-215ENST00000602574 OR56B4Q8NH76 319 aa8.28□□□□□ -1.08
COMMD3-215ENST00000602574 ORAOV1Q8WV07 137 aa8.28□□□□□ -1.08
COMMD3-215ENST00000602574 APH1BQ8WW43 257 aa8.28□□□□□ -1.08
COMMD3-215ENST00000602574 DPF1Q92782 380 aa8.28□□□□□ -1.08
COMMD3-215ENST00000602574 VOPP1Q96AW1 172 aa8.28□□□□□ -1.08
COMMD3-215ENST00000602574 ZNF707Q96C28 371 aaPredicted RBP8.28□□□□□ -1.08
COMMD3-215ENST00000602574 RCC1LQ96I51 464 aaKnown RBP8.28□□□□□ -1.08
COMMD3-215ENST00000602574 IGSF21Q96ID5 467 aa8.28□□□□□ -1.08
COMMD3-215ENST00000602574 SAMD8Q96LT4 415 aa8.28□□□□□ -1.08
COMMD3-215ENST00000602574 CITED2Q99967 270 aaPredicted RBP8.28□□□□□ -1.08
COMMD3-215ENST00000602574 ADAT1Q9BUB4 502 aaKnown RBP8.28□□□□□ -1.08
COMMD3-215ENST00000602574 WDCPQ9H6R7 721 aa8.28□□□□□ -1.08
COMMD3-215ENST00000602574 SOHLH2Q9NX45 425 aa8.28□□□□□ -1.08
COMMD3-215ENST00000602574 PIPOXQ9P0Z9 390 aa8.28□□□□□ -1.08
COMMD3-215ENST00000602574 KLHL8Q9P2G9 620 aaPredicted RBP8.28□□□□□ -1.08
COMMD3-215ENST00000602574 FBXL4Q9UKA2 621 aa8.28□□□□□ -1.08
COMMD3-215ENST00000602574 NOD1Q9Y239 953 aa8.28□□□□□ -1.08
COMMD3-215ENST00000602574 PCYT1BQ9Y5K3 369 aaPredicted RBP8.28□□□□□ -1.08
COMMD3-215ENST00000602574 DNAJB6O75190 326 aa8.27□□□□□ -1.09
COMMD3-215ENST00000602574 BCHEP06276 602 aa8.27□□□□□ -1.09
COMMD3-215ENST00000602574 HMGB2P26583 209 aaKnown RBP8.27□□□□□ -1.09
COMMD3-215ENST00000602574 PTGER3P43115 390 aa8.27□□□□□ -1.09
COMMD3-215ENST00000602574 SELENOPP49908 381 aa8.27□□□□□ -1.09
COMMD3-215ENST00000602574 DCAF7P61962 342 aa8.27□□□□□ -1.09
COMMD3-215ENST00000602574 PPIAP62937 165 aaKnown RBP8.27□□□□□ -1.09
COMMD3-215ENST00000602574 HGFACQ04756 655 aa8.27□□□□□ -1.09
COMMD3-215ENST00000602574 SMAD1Q15797 465 aaKnown RBP8.27□□□□□ -1.09
COMMD3-215ENST00000602574 C5orf64Q2M2E5 130 aa8.27□□□□□ -1.09
COMMD3-215ENST00000602574 Q5PR19 223 aa8.27□□□□□ -1.09
COMMD3-215ENST00000602574 ZNF57Q68EA5 555 aaPredicted RBP8.27□□□□□ -1.09
COMMD3-215ENST00000602574 CNIH2Q6PI25 160 aa8.27□□□□□ -1.09
COMMD3-215ENST00000602574 PLPPR4Q7Z2D5 763 aa8.27□□□□□ -1.09
COMMD3-215ENST00000602574 HIST3H2BBQ8N257 126 aa8.27□□□□□ -1.09
COMMD3-215ENST00000602574 HDDC3Q8N4P3 179 aa8.27□□□□□ -1.09
COMMD3-215ENST00000602574 HPSE2Q8WWQ2 592 aa8.27□□□□□ -1.09
COMMD3-215ENST00000602574 DNASE1L2Q92874 299 aa8.27□□□□□ -1.09
COMMD3-215ENST00000602574 ARL11Q969Q4 196 aa8.27□□□□□ -1.09
COMMD3-215ENST00000602574 TMEM19Q96HH6 336 aa8.27□□□□□ -1.09
COMMD3-215ENST00000602574 MGLLQ99685 303 aa8.27□□□□□ -1.09
COMMD3-215ENST00000602574 DPH2Q9BQC3 489 aaPredicted RBP8.27□□□□□ -1.09
COMMD3-215ENST00000602574 VPS25Q9BRG1 176 aa8.27□□□□□ -1.09
COMMD3-215ENST00000602574 RHNO1Q9BSD3 238 aa8.27□□□□□ -1.09
COMMD3-215ENST00000602574 ANGPTL4Q9BY76 406 aa8.27□□□□□ -1.09
COMMD3-215ENST00000602574 WWTR1Q9GZV5 400 aa8.27□□□□□ -1.09
COMMD3-215ENST00000602574 TMEM117Q9H0C3 514 aa8.27□□□□□ -1.09
COMMD3-215ENST00000602574 ARL6Q9H0F7 186 aa8.27□□□□□ -1.09
COMMD3-215ENST00000602574 SEC61A2Q9H9S3 476 aa8.27□□□□□ -1.09
COMMD3-215ENST00000602574 CNOT2Q9NZN8 540 aaKnown RBP8.27□□□□□ -1.09
COMMD3-215ENST00000602574 FOXJ2Q9P0K8 574 aa8.27□□□□□ -1.09
COMMD3-215ENST00000602574 PRODH2Q9UF12 536 aa8.27□□□□□ -1.09
COMMD3-215ENST00000602574 PSG11Q9UQ72 335 aa8.27□□□□□ -1.09
COMMD3-215ENST00000602574 ADAM18Q9Y3Q7 739 aa8.27□□□□□ -1.09
COMMD3-215ENST00000602574 OR51B4Q9Y5P0 310 aa8.27□□□□□ -1.09
COMMD3-215ENST00000602574 SBF2Q86WG5 1849 aa8.27□□□□□ -1.09
COMMD3-215ENST00000602574 QSER1Q2KHR3 1735 aa8.27□□□□□ -1.09
COMMD3-215ENST00000602574 SSNA1O43805 119 aa8.27□□□□□ -1.09
COMMD3-215ENST00000602574 GMFGO60234 142 aa8.27□□□□□ -1.09
COMMD3-215ENST00000602574 TBX18O95935 607 aa8.27□□□□□ -1.09
COMMD3-215ENST00000602574 VTNP04004 478 aa8.27□□□□□ -1.09
COMMD3-215ENST00000602574 RPN2P04844 631 aa8.27□□□□□ -1.09
COMMD3-215ENST00000602574 TBC1D3HP0C7X1 549 aa8.27□□□□□ -1.09
COMMD3-215ENST00000602574 CD8BP10966 210 aa8.27□□□□□ -1.09
COMMD3-215ENST00000602574 SMPD1P17405 629 aa8.27□□□□□ -1.09
COMMD3-215ENST00000602574 SHC1P29353 583 aa8.27□□□□□ -1.09
COMMD3-215ENST00000602574 AVPR2P30518 371 aa8.27□□□□□ -1.09
COMMD3-215ENST00000602574 IL2RGP31785 369 aa8.27□□□□□ -1.09
COMMD3-215ENST00000602574 EFNA3P52797 238 aa8.27□□□□□ -1.09
COMMD3-215ENST00000602574 PNLIPRP2P54317 469 aa8.27□□□□□ -1.09
COMMD3-215ENST00000602574 UBE2G2P60604 165 aa8.27□□□□□ -1.09
COMMD3-215ENST00000602574 HSF1Q00613 529 aa8.27□□□□□ -1.09
COMMD3-215ENST00000602574 PSG6Q00889 435 aa8.27□□□□□ -1.09
COMMD3-215ENST00000602574 NRG1Q02297 640 aaPredicted RBP8.27□□□□□ -1.09
COMMD3-215ENST00000602574 ENPP2Q13822 863 aa8.27□□□□□ -1.09
COMMD3-215ENST00000602574 KIAA0141Q14154 515 aaPredicted RBP8.27□□□□□ -1.09
COMMD3-215ENST00000602574 ARL6IP1Q15041 203 aa8.27□□□□□ -1.09
COMMD3-215ENST00000602574 SSX1Q16384 188 aa8.27□□□□□ -1.09
COMMD3-215ENST00000602574 BSXQ3C1V8 233 aa8.27□□□□□ -1.09
COMMD3-215ENST00000602574 C2orf76Q3KRA6 126 aa8.27□□□□□ -1.09
COMMD3-215ENST00000602574 MARC1Q5VT66 337 aa8.27□□□□□ -1.09
COMMD3-215ENST00000602574 SUSD4Q5VX71 490 aa8.27□□□□□ -1.09
COMMD3-215ENST00000602574 MTFR2Q6P444 385 aa8.27□□□□□ -1.09
COMMD3-215ENST00000602574 TMEM108Q6UXF1 575 aa8.27□□□□□ -1.09
COMMD3-215ENST00000602574 KCTD9Q7L273 389 aa8.27□□□□□ -1.09
COMMD3-215ENST00000602574 ZNF765Q7L2R6 523 aa8.27□□□□□ -1.09
COMMD3-215ENST00000602574 TCF24Q7RTU0 167 aa8.27□□□□□ -1.09
COMMD3-215ENST00000602574 CD163Q86VB7 1156 aa8.27□□□□□ -1.09
COMMD3-215ENST00000602574 LMNTD1Q8N9Z9 388 aa8.27□□□□□ -1.09
COMMD3-215ENST00000602574 GNPDA2Q8TDQ7 276 aa8.27□□□□□ -1.09
COMMD3-215ENST00000602574 GAL3ST3Q96A11 431 aa8.27□□□□□ -1.09
COMMD3-215ENST00000602574 ABHD17AQ96GS6 310 aa8.27□□□□□ -1.09
COMMD3-215ENST00000602574 SLC41A3Q96GZ6 507 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms