RNA–Protein interactions for RNA: ENST00000602421.5

MACF1-233, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2 BASIC

Gene MACF1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-233ENST00000602421 MARVELD2Q8N4S9 558 aa16.4■□□□□ 0.22
MACF1-233ENST00000602421 SIRT6Q8N6T7 355 aa16.4■□□□□ 0.22
MACF1-233ENST00000602421 OR5W2Q8NH69 310 aa16.4■□□□□ 0.22
MACF1-233ENST00000602421 B4GALNT2Q8NHY0 566 aa16.4■□□□□ 0.22
MACF1-233ENST00000602421 ZNF563Q8TA94 476 aa16.4■□□□□ 0.22
MACF1-233ENST00000602421 BRIX1Q8TDN6 353 aaKnown RBP16.4■□□□□ 0.22
MACF1-233ENST00000602421 GNPDA2Q8TDQ7 276 aa16.4■□□□□ 0.22
MACF1-233ENST00000602421 DUSP19Q8WTR2 217 aa16.4■□□□□ 0.22
MACF1-233ENST00000602421 TMEM255BQ8WV15 326 aa16.4■□□□□ 0.22
MACF1-233ENST00000602421 RNF138Q8WVD3 245 aa16.4■□□□□ 0.22
MACF1-233ENST00000602421 DNAJA4Q8WW22 397 aaPredicted RBP16.4■□□□□ 0.22
MACF1-233ENST00000602421 MPP4Q96JB8 637 aa16.4■□□□□ 0.22
MACF1-233ENST00000602421 HS6ST2Q96MM7 605 aa16.4■□□□□ 0.22
MACF1-233ENST00000602421 PRSS27Q9BQR3 290 aa16.4■□□□□ 0.22
MACF1-233ENST00000602421 ANKRD60Q9BZ19 345 aa16.4■□□□□ 0.22
MACF1-233ENST00000602421 KRCC1Q9NPI7 259 aaPredicted RBP16.4■□□□□ 0.22
MACF1-233ENST00000602421 ATP13A2Q9NQ11 1180 aa16.4■□□□□ 0.22
MACF1-233ENST00000602421 SDHAF3Q9NRP4 125 aa16.4■□□□□ 0.22
MACF1-233ENST00000602421 ENOPH1Q9UHY7 261 aa16.4■□□□□ 0.22
MACF1-233ENST00000602421 CEP250Q9BV73 2442 aa16.4■□□□□ 0.22
MACF1-233ENST00000602421 PGCP20142 388 aa16.39■□□□□ 0.21
MACF1-233ENST00000602421 P2RX1P51575 399 aa16.39■□□□□ 0.21
MACF1-233ENST00000602421 AIMP2Q13155 320 aaKnown RBP16.39■□□□□ 0.21
MACF1-233ENST00000602421 CBFBQ13951 182 aa16.39■□□□□ 0.21
MACF1-233ENST00000602421 MEP1AQ16819 746 aa16.39■□□□□ 0.21
MACF1-233ENST00000602421 C1orf94Q6P1W5 598 aa16.39■□□□□ 0.21
MACF1-233ENST00000602421 PRICKLE2Q7Z3G6 844 aa16.39■□□□□ 0.21
MACF1-233ENST00000602421 ZER1Q7Z7L7 766 aa16.39■□□□□ 0.21
MACF1-233ENST00000602421 RNF113BQ8IZP6 322 aaKnown RBP16.39■□□□□ 0.21
MACF1-233ENST00000602421 TMEM239Q8WW34 195 aa16.39■□□□□ 0.21
MACF1-233ENST00000602421 GABARAPL3Q9BY60 117 aa16.39■□□□□ 0.21
MACF1-233ENST00000602421 HPF1Q9NWY4 346 aa16.39■□□□□ 0.21
MACF1-233ENST00000602421 ICAM5Q9UMF0 924 aa16.39■□□□□ 0.21
MACF1-233ENST00000602421 LOC100130705A0A1B0GUX0 176 aa16.38■□□□□ 0.21
MACF1-233ENST00000602421 SLC16A6O15403 523 aa16.38■□□□□ 0.21
MACF1-233ENST00000602421 GMFGO60234 142 aa16.38■□□□□ 0.21
MACF1-233ENST00000602421 NTN1O95631 604 aa16.38■□□□□ 0.21
MACF1-233ENST00000602421 NUDT14O95848 222 aa16.38■□□□□ 0.21
MACF1-233ENST00000602421 MYF6P23409 242 aa16.38■□□□□ 0.21
MACF1-233ENST00000602421 POLR2IP36954 125 aaKnown RBP16.38■□□□□ 0.21
MACF1-233ENST00000602421 ST13P50502 369 aaKnown RBP16.38■□□□□ 0.21
MACF1-233ENST00000602421 TPD52P55327 224 aaPredicted RBP16.38■□□□□ 0.21
MACF1-233ENST00000602421 LSM11P83369 360 aaKnown RBP eCLIP16.38■□□□□ 0.21
MACF1-233ENST00000602421 COX10Q12887 443 aa16.38■□□□□ 0.21
MACF1-233ENST00000602421 NPRL3Q12980 569 aa16.38■□□□□ 0.21
MACF1-233ENST00000602421 TBC1D25Q3MII6 688 aa16.38■□□□□ 0.21
MACF1-233ENST00000602421 ACER2Q5QJU3 275 aa16.38■□□□□ 0.21
MACF1-233ENST00000602421 SWT1Q5T5J6 900 aaKnown RBP16.38■□□□□ 0.21
MACF1-233ENST00000602421 B3GNTL1Q67FW5 361 aaPredicted RBP16.38■□□□□ 0.21
MACF1-233ENST00000602421 KRT80Q6KB66 452 aa16.38■□□□□ 0.21
MACF1-233ENST00000602421 KLHL17Q6TDP4 642 aa16.38■□□□□ 0.21
MACF1-233ENST00000602421 WDR88Q6ZMY6 472 aa16.38■□□□□ 0.21
MACF1-233ENST00000602421 PARP8Q8N3A8 854 aa16.38■□□□□ 0.21
MACF1-233ENST00000602421 SECISBP2Q96T21 854 aaKnown RBP16.38■□□□□ 0.21
MACF1-233ENST00000602421 HHATLQ9HCP6 504 aa16.38■□□□□ 0.21
MACF1-233ENST00000602421 GALNT9Q9HCQ5 603 aa16.38■□□□□ 0.21
MACF1-233ENST00000602421 TEKT2Q9UIF3 430 aa16.38■□□□□ 0.21
MACF1-233ENST00000602421 C2orf72A6NCS6 295 aa16.37■□□□□ 0.21
MACF1-233ENST00000602421 ADAM10O14672 748 aa16.37■□□□□ 0.21
MACF1-233ENST00000602421 BCKDKO14874 412 aa16.37■□□□□ 0.21
MACF1-233ENST00000602421 CLIC3O95833 236 aa16.37■□□□□ 0.21
MACF1-233ENST00000602421 GNAO1P09471 354 aa16.37■□□□□ 0.21
MACF1-233ENST00000602421 GSTM3P21266 225 aa16.37■□□□□ 0.21
MACF1-233ENST00000602421 ITGA3P26006 1051 aa16.37■□□□□ 0.21
MACF1-233ENST00000602421 RBM34P42696 430 aaKnown RBP16.37■□□□□ 0.21
MACF1-233ENST00000602421 GAS1P54826 345 aa16.37■□□□□ 0.21
MACF1-233ENST00000602421 COL28A1Q2UY09 1125 aa16.37■□□□□ 0.21
MACF1-233ENST00000602421 BICRALQ6AI39 1079 aa16.37■□□□□ 0.21
MACF1-233ENST00000602421 TTC33Q6PID6 262 aaPredicted RBP16.37■□□□□ 0.21
MACF1-233ENST00000602421 USP51Q70EK9 711 aa16.37■□□□□ 0.21
MACF1-233ENST00000602421 NRMQ8IXM6 262 aa16.37■□□□□ 0.21
MACF1-233ENST00000602421 CLEC1AQ8NC01 280 aa16.37■□□□□ 0.21
MACF1-233ENST00000602421 C3orf49Q96BT1 292 aa16.37■□□□□ 0.21
MACF1-233ENST00000602421 NR1H4Q96RI1 486 aaPredicted RBP16.37■□□□□ 0.21
MACF1-233ENST00000602421 CCNL2Q96S94 520 aaPredicted RBP16.37■□□□□ 0.21
MACF1-233ENST00000602421 GRIP2Q9C0E4 1043 aa16.37■□□□□ 0.21
MACF1-233ENST00000602421 LHPPQ9H008 270 aa16.37■□□□□ 0.21
MACF1-233ENST00000602421 PPP4R1LQ9P1A2 415 aa16.37■□□□□ 0.21
MACF1-233ENST00000602421 KLK13Q9UKR3 277 aa16.37■□□□□ 0.21
MACF1-233ENST00000602421 MED31Q9Y3C7 131 aa16.37■□□□□ 0.21
MACF1-233ENST00000602421 CHCHD2Q9Y6H1 151 aaPredicted RBP16.37■□□□□ 0.21
MACF1-233ENST00000602421 C17orf51A8MQB3 221 aa16.36■□□□□ 0.21
MACF1-233ENST00000602421 PIP5K1CO60331 668 aa16.36■□□□□ 0.21
MACF1-233ENST00000602421 PNMTP11086 282 aa16.36■□□□□ 0.21
MACF1-233ENST00000602421 GP1BBP13224 206 aa16.36■□□□□ 0.21
MACF1-233ENST00000602421 OSMP13725 252 aa16.36■□□□□ 0.21
MACF1-233ENST00000602421 PTNP21246 168 aa16.36■□□□□ 0.21
MACF1-233ENST00000602421 MSX1P28360 303 aa16.36■□□□□ 0.21
MACF1-233ENST00000602421 PTGDSP41222 190 aa16.36■□□□□ 0.21
MACF1-233ENST00000602421 CASP3P42574 277 aa16.36■□□□□ 0.21
MACF1-233ENST00000602421 SLC1A3P43003 542 aa16.36■□□□□ 0.21
MACF1-233ENST00000602421 OMPP47874 163 aa16.36■□□□□ 0.21
MACF1-233ENST00000602421 SUMO3P55854 103 aaPredicted RBP16.36■□□□□ 0.21
MACF1-233ENST00000602421 ESRRGP62508 458 aa16.36■□□□□ 0.21
MACF1-233ENST00000602421 ALDH6A1Q02252 535 aaKnown RBP16.36■□□□□ 0.21
MACF1-233ENST00000602421 SNTA1Q13424 505 aa16.36■□□□□ 0.21
MACF1-233ENST00000602421 ATP1A1-AS1Q5TC04 95 aa16.36■□□□□ 0.21
MACF1-233ENST00000602421 CD300LDQ6UXZ3 194 aa16.36■□□□□ 0.21
MACF1-233ENST00000602421 CDK20Q8IZL9 346 aa16.36■□□□□ 0.21
MACF1-233ENST00000602421 THAP4Q8WY91 577 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms