RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 RPS6KA3P51812 740 aa16.46■□□□□ 0.23
VRK3-225ENST00000601912 C17orf67Q0P5P2 114 aa16.46■□□□□ 0.23
VRK3-225ENST00000601912 Q0VFX4 171 aa16.46■□□□□ 0.23
VRK3-225ENST00000601912 IL18R1Q13478 541 aa16.46■□□□□ 0.23
VRK3-225ENST00000601912 TGIF1Q15583 401 aa16.46■□□□□ 0.23
VRK3-225ENST00000601912 ZNF791Q3KP31 576 aaPredicted RBP16.46■□□□□ 0.23
VRK3-225ENST00000601912 JMJD6Q6NYC1 403 aaPredicted RBP16.46■□□□□ 0.23
VRK3-225ENST00000601912 USP51Q70EK9 711 aa16.46■□□□□ 0.23
VRK3-225ENST00000601912 ZER1Q7Z7L7 766 aa16.46■□□□□ 0.23
VRK3-225ENST00000601912 TMEM156Q8N614 296 aa16.46■□□□□ 0.23
VRK3-225ENST00000601912 OR10G3Q8NGC4 313 aa16.46■□□□□ 0.23
VRK3-225ENST00000601912 ZNF563Q8TA94 476 aa16.46■□□□□ 0.23
VRK3-225ENST00000601912 GNPDA2Q8TDQ7 276 aa16.46■□□□□ 0.23
VRK3-225ENST00000601912 DUSP19Q8WTR2 217 aa16.46■□□□□ 0.23
VRK3-225ENST00000601912 TMEM239Q8WW34 195 aa16.46■□□□□ 0.23
VRK3-225ENST00000601912 FER1L6-AS2Q96M78 137 aa16.46■□□□□ 0.23
VRK3-225ENST00000601912 PRSS27Q9BQR3 290 aa16.46■□□□□ 0.23
VRK3-225ENST00000601912 GRIP2Q9C0E4 1043 aa16.46■□□□□ 0.23
VRK3-225ENST00000601912 METTL7AQ9H8H3 244 aa16.46■□□□□ 0.23
VRK3-225ENST00000601912 HHATLQ9HCP6 504 aa16.46■□□□□ 0.23
VRK3-225ENST00000601912 SDHAF3Q9NRP4 125 aa16.46■□□□□ 0.23
VRK3-225ENST00000601912 KLRF1Q9NZS2 232 aa16.46■□□□□ 0.23
VRK3-225ENST00000601912 DCDC2BA2VCK2 349 aa16.45■□□□□ 0.22
VRK3-225ENST00000601912 MASP2O00187 686 aa16.45■□□□□ 0.22
VRK3-225ENST00000601912 BCKDKO14874 412 aa16.45■□□□□ 0.22
VRK3-225ENST00000601912 OR6B1O95007 311 aa16.45■□□□□ 0.22
VRK3-225ENST00000601912 LYPD3O95274 346 aa16.45■□□□□ 0.22
VRK3-225ENST00000601912 SLC34A2O95436 690 aa16.45■□□□□ 0.22
VRK3-225ENST00000601912 CLIC3O95833 236 aa16.45■□□□□ 0.22
VRK3-225ENST00000601912 NUDT14O95848 222 aa16.45■□□□□ 0.22
VRK3-225ENST00000601912 LIFP15018 202 aa16.45■□□□□ 0.22
VRK3-225ENST00000601912 PGCP20142 388 aa16.45■□□□□ 0.22
VRK3-225ENST00000601912 RBM34P42696 430 aaKnown RBP16.45■□□□□ 0.22
VRK3-225ENST00000601912 P2RX1P51575 399 aa16.45■□□□□ 0.22
VRK3-225ENST00000601912 ESRRGP62508 458 aa16.45■□□□□ 0.22
VRK3-225ENST00000601912 CAMK2BQ13554 666 aa16.45■□□□□ 0.22
VRK3-225ENST00000601912 CBFBQ13951 182 aa16.45■□□□□ 0.22
VRK3-225ENST00000601912 H3F3CQ6NXT2 135 aa16.45■□□□□ 0.22
VRK3-225ENST00000601912 KLHL17Q6TDP4 642 aa16.45■□□□□ 0.22
VRK3-225ENST00000601912 IL20RBQ6UXL0 311 aa16.45■□□□□ 0.22
VRK3-225ENST00000601912 CD300LDQ6UXZ3 194 aa16.45■□□□□ 0.22
VRK3-225ENST00000601912 NRMQ8IXM6 262 aa16.45■□□□□ 0.22
VRK3-225ENST00000601912 C8orf59Q8N0T1 100 aaPredicted RBP16.45■□□□□ 0.22
VRK3-225ENST00000601912 OR5W2Q8NH69 310 aa16.45■□□□□ 0.22
VRK3-225ENST00000601912 B4GALNT2Q8NHY0 566 aa16.45■□□□□ 0.22
VRK3-225ENST00000601912 MUS81Q96NY9 551 aa16.45■□□□□ 0.22
VRK3-225ENST00000601912 UBAP1Q9NZ09 502 aa16.45■□□□□ 0.22
VRK3-225ENST00000601912 ICAM5Q9UMF0 924 aa16.45■□□□□ 0.22
VRK3-225ENST00000601912 OSMP13725 252 aa16.44■□□□□ 0.22
VRK3-225ENST00000601912 KEAP1Q14145 624 aa16.44■□□□□ 0.22
VRK3-225ENST00000601912 DCAF10Q5QP82 559 aa16.44■□□□□ 0.22
VRK3-225ENST00000601912 PRICKLE2Q7Z3G6 844 aa16.44■□□□□ 0.22
VRK3-225ENST00000601912 CDK20Q8IZL9 346 aa16.44■□□□□ 0.22
VRK3-225ENST00000601912 RNF138Q8WVD3 245 aa16.44■□□□□ 0.22
VRK3-225ENST00000601912 NXPE2Q96DL1 559 aa16.44■□□□□ 0.22
VRK3-225ENST00000601912 THOC3Q96J01 351 aaKnown RBP16.44■□□□□ 0.22
VRK3-225ENST00000601912 CCNL2Q96S94 520 aaPredicted RBP16.44■□□□□ 0.22
VRK3-225ENST00000601912 SECISBP2Q96T21 854 aaKnown RBP16.44■□□□□ 0.22
VRK3-225ENST00000601912 ATP13A2Q9NQ11 1180 aa16.44■□□□□ 0.22
VRK3-225ENST00000601912 MED31Q9Y3C7 131 aa16.44■□□□□ 0.22
VRK3-225ENST00000601912 GMPPBQ9Y5P6 360 aa16.44■□□□□ 0.22
VRK3-225ENST00000601912 CFAP54Q96N23 3096 aa16.44■□□□□ 0.22
VRK3-225ENST00000601912 EXPH5Q8NEV8 1989 aa16.44■□□□□ 0.22
VRK3-225ENST00000601912 MAN1A2O60476 641 aa16.43■□□□□ 0.22
VRK3-225ENST00000601912 PNMTP11086 282 aa16.43■□□□□ 0.22
VRK3-225ENST00000601912 OMPP47874 163 aa16.43■□□□□ 0.22
VRK3-225ENST00000601912 CHN2P52757 468 aa16.43■□□□□ 0.22
VRK3-225ENST00000601912 LSM11P83369 360 aaKnown RBP eCLIP16.43■□□□□ 0.22
VRK3-225ENST00000601912 AIMP2Q13155 320 aaKnown RBP16.43■□□□□ 0.22
VRK3-225ENST00000601912 MEP1AQ16819 746 aa16.43■□□□□ 0.22
VRK3-225ENST00000601912 TTC33Q6PID6 262 aaPredicted RBP16.43■□□□□ 0.22
VRK3-225ENST00000601912 WDR88Q6ZMY6 472 aa16.43■□□□□ 0.22
VRK3-225ENST00000601912 SIRT6Q8N6T7 355 aa16.43■□□□□ 0.22
VRK3-225ENST00000601912 SETD9Q8NE22 299 aa16.43■□□□□ 0.22
VRK3-225ENST00000601912 BRIX1Q8TDN6 353 aaKnown RBP16.43■□□□□ 0.22
VRK3-225ENST00000601912 APOL4Q9BPW4 351 aa16.43■□□□□ 0.22
VRK3-225ENST00000601912 PNPLA3Q9NST1 481 aa16.43■□□□□ 0.22
VRK3-225ENST00000601912 HPF1Q9NWY4 346 aa16.43■□□□□ 0.22
VRK3-225ENST00000601912 TEKT2Q9UIF3 430 aa16.43■□□□□ 0.22
VRK3-225ENST00000601912 HEATR5AQ86XA9 2040 aa16.43■□□□□ 0.22
VRK3-225ENST00000601912 GMFGO60234 142 aa16.43■□□□□ 0.22
VRK3-225ENST00000601912 SLC1A3P43003 542 aa16.43■□□□□ 0.22
VRK3-225ENST00000601912 ALDH6A1Q02252 535 aaKnown RBP16.43■□□□□ 0.22
VRK3-225ENST00000601912 TSPAN31Q12999 210 aa16.43■□□□□ 0.22
VRK3-225ENST00000601912 SNTA1Q13424 505 aa16.43■□□□□ 0.22
VRK3-225ENST00000601912 ACER2Q5QJU3 275 aa16.43■□□□□ 0.22
VRK3-225ENST00000601912 UGT2A3Q6UWM9 527 aa16.43■□□□□ 0.22
VRK3-225ENST00000601912 THAP5Q7Z6K1 395 aa16.43■□□□□ 0.22
VRK3-225ENST00000601912 CLEC1AQ8NC01 280 aa16.43■□□□□ 0.22
VRK3-225ENST00000601912 C3orf49Q96BT1 292 aa16.43■□□□□ 0.22
VRK3-225ENST00000601912 FAM46AQ96IP4 442 aaKnown RBP16.43■□□□□ 0.22
VRK3-225ENST00000601912 HRASLS5Q96KN8 279 aa16.43■□□□□ 0.22
VRK3-225ENST00000601912 ING2Q9H160 280 aa16.43■□□□□ 0.22
VRK3-225ENST00000601912 GALNT9Q9HCQ5 603 aa16.43■□□□□ 0.22
VRK3-225ENST00000601912 PPP4R1LQ9P1A2 415 aa16.43■□□□□ 0.22
VRK3-225ENST00000601912 NDRG4Q9ULP0 352 aaKnown RBP16.43■□□□□ 0.22
VRK3-225ENST00000601912 TMEM5Q9Y2B1 443 aa16.43■□□□□ 0.22
VRK3-225ENST00000601912 A0A087WUJ7 227 aa16.42■□□□□ 0.22
VRK3-225ENST00000601912 MAGEA13PA6NCF6 341 aa16.42■□□□□ 0.22
VRK3-225ENST00000601912 TRABD2BA6NFA1 517 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms