RNA–Protein interactions for RNA: ENST00000601150.5

TRIM28-215, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-215ENST00000601150 PGCP20142 388 aa15.17■□□□□ 0.02
TRIM28-215ENST00000601150 CTSSP25774 331 aa15.17■□□□□ 0.02
TRIM28-215ENST00000601150 ZNF136P52737 540 aa15.17■□□□□ 0.02
TRIM28-215ENST00000601150 PLXDC2Q6UX71 529 aa15.17■□□□□ 0.02
TRIM28-215ENST00000601150 DLEU7Q6UYE1 221 aa15.17■□□□□ 0.02
TRIM28-215ENST00000601150 P4HA3Q7Z4N8 544 aa15.17■□□□□ 0.02
TRIM28-215ENST00000601150 DHDDSQ86SQ9 333 aa15.17■□□□□ 0.02
TRIM28-215ENST00000601150 LILRA2Q8N149 483 aa15.17■□□□□ 0.02
TRIM28-215ENST00000601150 DPP10Q8N608 796 aa15.17■□□□□ 0.02
TRIM28-215ENST00000601150 METTL25Q8N6Q8 603 aa15.17■□□□□ 0.02
TRIM28-215ENST00000601150 TMEM19Q96HH6 336 aa15.17■□□□□ 0.02
TRIM28-215ENST00000601150 TREX2Q9BQ50 279 aaPredicted RBP15.17■□□□□ 0.02
TRIM28-215ENST00000601150 PINK1Q9BXM7 581 aa15.17■□□□□ 0.02
TRIM28-215ENST00000601150 EXOSC3Q9NQT5 275 aaKnown RBP15.17■□□□□ 0.02
TRIM28-215ENST00000601150 A0A0G2JPF8 293 aa15.16■□□□□ 0.02
TRIM28-215ENST00000601150 CLDN24A6NM45 220 aa15.16■□□□□ 0.02
TRIM28-215ENST00000601150 EVPLLA8MZ36 301 aa15.16■□□□□ 0.02
TRIM28-215ENST00000601150 HNRNPCL2B2RXH8 293 aa15.16■□□□□ 0.02
TRIM28-215ENST00000601150 HNRNPCL3B7ZW38 293 aa15.16■□□□□ 0.02
TRIM28-215ENST00000601150 ETV2O00321 342 aaPredicted RBP15.16■□□□□ 0.02
TRIM28-215ENST00000601150 DYNC1I1O14576 645 aa15.16■□□□□ 0.02
TRIM28-215ENST00000601150 HNRNPRO43390 633 aaKnown RBP15.16■□□□□ 0.02
TRIM28-215ENST00000601150 HNRNPCL1O60812 293 aaKnown RBP15.16■□□□□ 0.02
TRIM28-215ENST00000601150 BCAS1O75363 584 aaPredicted RBP15.16■□□□□ 0.02
TRIM28-215ENST00000601150 NTN1O95631 604 aa15.16■□□□□ 0.02
TRIM28-215ENST00000601150 TGM6O95932 706 aa15.16■□□□□ 0.02
TRIM28-215ENST00000601150 IL18BPO95998 194 aa15.16■□□□□ 0.02
TRIM28-215ENST00000601150 NUDT7P0C024 238 aa15.16■□□□□ 0.02
TRIM28-215ENST00000601150 HNRNPCL4P0DMR1 293 aa15.16■□□□□ 0.02
TRIM28-215ENST00000601150 NID1P14543 1247 aa15.16■□□□□ 0.02
TRIM28-215ENST00000601150 IL11P20809 199 aa15.16■□□□□ 0.02
TRIM28-215ENST00000601150 BMP5P22003 454 aa15.16■□□□□ 0.02
TRIM28-215ENST00000601150 OPRM1P35372 400 aa15.16■□□□□ 0.02
TRIM28-215ENST00000601150 SLC6A8P48029 635 aa15.16■□□□□ 0.02
TRIM28-215ENST00000601150 TFF3Q07654 80 aa15.16■□□□□ 0.02
TRIM28-215ENST00000601150 SGCBQ16585 318 aa15.16■□□□□ 0.02
TRIM28-215ENST00000601150 RPS26P11Q5JNZ5 115 aaPredicted RBP15.16■□□□□ 0.02
TRIM28-215ENST00000601150 PRAMEF8Q5VWM4 474 aa15.16■□□□□ 0.02
TRIM28-215ENST00000601150 PRAMEF7Q5VXH5 474 aa15.16■□□□□ 0.02
TRIM28-215ENST00000601150 OR2A2Q6IF42 318 aa15.16■□□□□ 0.02
TRIM28-215ENST00000601150 POMZP3Q6PJE2 187 aa15.16■□□□□ 0.02
TRIM28-215ENST00000601150 ESPNLQ6ZVH7 1005 aa15.16■□□□□ 0.02
TRIM28-215ENST00000601150 RETREG3Q86VR2 466 aa15.16■□□□□ 0.02
TRIM28-215ENST00000601150 OR52P1PQ8NH57 321 aa15.16■□□□□ 0.02
TRIM28-215ENST00000601150 TMEM234Q8WY98 164 aa15.16■□□□□ 0.02
TRIM28-215ENST00000601150 ST8SIA1Q92185 356 aa15.16■□□□□ 0.02
TRIM28-215ENST00000601150 CNOT9Q92600 299 aaKnown RBP15.16■□□□□ 0.02
TRIM28-215ENST00000601150 CPPED1Q9BRF8 314 aaPredicted RBP15.16■□□□□ 0.02
TRIM28-215ENST00000601150 TMEM185BQ9H7F4 350 aa15.16■□□□□ 0.02
TRIM28-215ENST00000601150 CACYBPQ9HB71 228 aaKnown RBP15.16■□□□□ 0.02
TRIM28-215ENST00000601150 SAR1AQ9NR31 198 aa15.16■□□□□ 0.02
TRIM28-215ENST00000601150 PAQR5Q9NXK6 330 aaPredicted RBP15.16■□□□□ 0.02
TRIM28-215ENST00000601150 ZNF175Q9Y473 711 aa15.16■□□□□ 0.02
TRIM28-215ENST00000601150 GJE1A6NN92 205 aa15.15■□□□□ 0.02
TRIM28-215ENST00000601150 C5orf58C9J3I9 102 aa15.15■□□□□ 0.02
TRIM28-215ENST00000601150 ADAMDEC1O15204 470 aa15.15■□□□□ 0.02
TRIM28-215ENST00000601150 EFNA2O43921 213 aa15.15■□□□□ 0.02
TRIM28-215ENST00000601150 OPN1LWP04000 364 aa15.15■□□□□ 0.02
TRIM28-215ENST00000601150 COX6B1P14854 86 aa15.15■□□□□ 0.02
TRIM28-215ENST00000601150 GPX2P18283 190 aa15.15■□□□□ 0.02
TRIM28-215ENST00000601150 EIF1AXP47813 144 aaKnown RBP15.15■□□□□ 0.02
TRIM28-215ENST00000601150 SESN3P58005 492 aa15.15■□□□□ 0.02
TRIM28-215ENST00000601150 EEF1A1P68104 462 aaKnown RBP15.15■□□□□ 0.02
TRIM28-215ENST00000601150 PLAURQ03405 335 aa15.15■□□□□ 0.02
TRIM28-215ENST00000601150 KLF10Q13118 480 aa15.15■□□□□ 0.02
TRIM28-215ENST00000601150 NFYCQ13952 458 aa15.15■□□□□ 0.02
TRIM28-215ENST00000601150 CTU2Q2VPK5 515 aaKnown RBP15.15■□□□□ 0.02
TRIM28-215ENST00000601150 LIN52Q52LA3 116 aa15.15■□□□□ 0.02
TRIM28-215ENST00000601150 RUNDC3AQ59EK9 446 aa15.15■□□□□ 0.02
TRIM28-215ENST00000601150 PDSS1Q5T2R2 415 aa15.15■□□□□ 0.02
TRIM28-215ENST00000601150 GCNT6Q5T4J0 391 aa15.15■□□□□ 0.02
TRIM28-215ENST00000601150 MRPL2Q5T653 305 aaKnown RBP15.15■□□□□ 0.02
TRIM28-215ENST00000601150 EEF1A1P5Q5VTE0 462 aa15.15■□□□□ 0.02
TRIM28-215ENST00000601150 RELL2Q8NC24 303 aaPredicted RBP15.15■□□□□ 0.02
TRIM28-215ENST00000601150 OR10D3Q8NH80 312 aa15.15■□□□□ 0.02
TRIM28-215ENST00000601150 OR2V1Q8NHB1 315 aa15.15■□□□□ 0.02
TRIM28-215ENST00000601150 ZNF563Q8TA94 476 aa15.15■□□□□ 0.02
TRIM28-215ENST00000601150 BBS10Q8TAM1 723 aa15.15■□□□□ 0.02
TRIM28-215ENST00000601150 C10orf82Q8WW14 230 aa15.15■□□□□ 0.02
TRIM28-215ENST00000601150 FIG4Q92562 907 aa15.15■□□□□ 0.02
TRIM28-215ENST00000601150 MAL2Q969L2 176 aa15.15■□□□□ 0.02
TRIM28-215ENST00000601150 ZNF524Q96C55 264 aa15.15■□□□□ 0.02
TRIM28-215ENST00000601150 INTS12Q96CB8 462 aaKnown RBP15.15■□□□□ 0.02
TRIM28-215ENST00000601150 ZNF845Q96IR2 970 aaPredicted RBP15.15■□□□□ 0.02
TRIM28-215ENST00000601150 ADGRG7Q96K78 797 aa15.15■□□□□ 0.02
TRIM28-215ENST00000601150 KLHL15Q96M94 604 aa15.15■□□□□ 0.02
TRIM28-215ENST00000601150 SFXN3Q9BWM7 321 aa15.15■□□□□ 0.02
TRIM28-215ENST00000601150 IKZF5Q9H5V7 419 aa15.15■□□□□ 0.02
TRIM28-215ENST00000601150 BCL2L10Q9HD36 194 aa15.15■□□□□ 0.02
TRIM28-215ENST00000601150 NPDC1Q9NQX5 325 aaPredicted RBP15.15■□□□□ 0.02
TRIM28-215ENST00000601150 ACER3Q9NUN7 267 aa15.15■□□□□ 0.02
TRIM28-215ENST00000601150 DNAJB12Q9NXW2 375 aaKnown RBP15.15■□□□□ 0.02
TRIM28-215ENST00000601150 ZNF232Q9UNY5 417 aa15.15■□□□□ 0.02
TRIM28-215ENST00000601150 UNC79Q9P2D8 2635 aa15.14■□□□□ 0.01
TRIM28-215ENST00000601150 A0A0J9YW62 118 aa15.14■□□□□ 0.01
TRIM28-215ENST00000601150 TNFSF11O14788 317 aa15.14■□□□□ 0.01
TRIM28-215ENST00000601150 THBS1P07996 1170 aa15.14■□□□□ 0.01
TRIM28-215ENST00000601150 ARAFP10398 606 aa15.14■□□□□ 0.01
TRIM28-215ENST00000601150 FCGR2AP12318 317 aa15.14■□□□□ 0.01
TRIM28-215ENST00000601150 ADSLP30566 484 aaPredicted RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms