RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 METTL21CQ5VZV1 264 aa14.15□□□□□ -0.14
RPS28-203ENST00000600659 ZNF295-AS1Q8N0V1 137 aa14.15□□□□□ -0.14
RPS28-203ENST00000600659 GCNT2Q8N0V5 402 aa14.15□□□□□ -0.14
RPS28-203ENST00000600659 MEIOBQ8N635 442 aa14.15□□□□□ -0.14
RPS28-203ENST00000600659 CNOT9Q92600 299 aaKnown RBP14.15□□□□□ -0.14
RPS28-203ENST00000600659 MARVELD3Q96A59 401 aa14.15□□□□□ -0.14
RPS28-203ENST00000600659 TMEM19Q96HH6 336 aa14.15□□□□□ -0.14
RPS28-203ENST00000600659 CPPED1Q9BRF8 314 aaPredicted RBP14.15□□□□□ -0.14
RPS28-203ENST00000600659 TMEM185BQ9H7F4 350 aa14.15□□□□□ -0.14
RPS28-203ENST00000600659 KCNJ16Q9NPI9 418 aa14.15□□□□□ -0.14
RPS28-203ENST00000600659 EXOSC3Q9NQT5 275 aaKnown RBP14.15□□□□□ -0.14
RPS28-203ENST00000600659 DNAJB12Q9NXW2 375 aaKnown RBP14.15□□□□□ -0.14
RPS28-203ENST00000600659 JKAMPQ9P055 326 aa14.15□□□□□ -0.14
RPS28-203ENST00000600659 ZNF629Q9UEG4 869 aaPredicted RBP14.15□□□□□ -0.14
RPS28-203ENST00000600659 SLC35A3Q9Y2D2 325 aa14.15□□□□□ -0.14
RPS28-203ENST00000600659 GPC6Q9Y625 555 aaPredicted RBP14.15□□□□□ -0.14
RPS28-203ENST00000600659 APCP25054 2843 aa14.15□□□□□ -0.14
RPS28-203ENST00000600659 ADAMDEC1O15204 470 aa14.15□□□□□ -0.15
RPS28-203ENST00000600659 HNRNPRO43390 633 aaKnown RBP14.15□□□□□ -0.15
RPS28-203ENST00000600659 IL18BPO95998 194 aa14.15□□□□□ -0.15
RPS28-203ENST00000600659 OPN1LWP04000 364 aa14.15□□□□□ -0.15
RPS28-203ENST00000600659 SNRPB2P08579 225 aaKnown RBP14.15□□□□□ -0.15
RPS28-203ENST00000600659 TMIGD3P0DMS9 266 aaPredicted RBP14.15□□□□□ -0.15
RPS28-203ENST00000600659 NR2F1P10589 423 aa14.15□□□□□ -0.15
RPS28-203ENST00000600659 BMP5P22003 454 aa14.15□□□□□ -0.15
RPS28-203ENST00000600659 CTSSP25774 331 aa14.15□□□□□ -0.15
RPS28-203ENST00000600659 ADH6P28332 368 aa14.15□□□□□ -0.15
RPS28-203ENST00000600659 SLC6A8P48029 635 aa14.15□□□□□ -0.15
RPS28-203ENST00000600659 ANXA11P50995 505 aaKnown RBP14.15□□□□□ -0.15
RPS28-203ENST00000600659 AGFG1P52594 562 aaKnown RBP14.15□□□□□ -0.15
RPS28-203ENST00000600659 HPCAP84074 193 aa14.15□□□□□ -0.15
RPS28-203ENST00000600659 FADDQ13158 208 aa14.15□□□□□ -0.15
RPS28-203ENST00000600659 CBFBQ13951 182 aa14.15□□□□□ -0.15
RPS28-203ENST00000600659 FBXL19-AS1Q494R0 122 aa14.15□□□□□ -0.15
RPS28-203ENST00000600659 EIF3MQ7L2H7 374 aaKnown RBP14.15□□□□□ -0.15
RPS28-203ENST00000600659 GRAMD2AQ8IUY3 354 aa14.15□□□□□ -0.15
RPS28-203ENST00000600659 DPP10Q8N608 796 aa14.15□□□□□ -0.15
RPS28-203ENST00000600659 TMCO5AQ8N6Q1 288 aa14.15□□□□□ -0.15
RPS28-203ENST00000600659 FNDC9Q8TBE3 224 aa14.15□□□□□ -0.15
RPS28-203ENST00000600659 C10orf82Q8WW14 230 aa14.15□□□□□ -0.15
RPS28-203ENST00000600659 MAL2Q969L2 176 aa14.15□□□□□ -0.15
RPS28-203ENST00000600659 MRGPRX4Q96LA9 322 aa14.15□□□□□ -0.15
RPS28-203ENST00000600659 ZFP3Q96NJ6 502 aa14.15□□□□□ -0.15
RPS28-203ENST00000600659 TM9SF2Q99805 663 aa14.15□□□□□ -0.15
RPS28-203ENST00000600659 SPOCK3Q9BQ16 436 aa14.15□□□□□ -0.15
RPS28-203ENST00000600659 THUMPD3Q9BV44 507 aaKnown RBP14.15□□□□□ -0.15
RPS28-203ENST00000600659 PINK1Q9BXM7 581 aa14.15□□□□□ -0.15
RPS28-203ENST00000600659 RABEP2Q9H5N1 569 aa14.15□□□□□ -0.15
RPS28-203ENST00000600659 COQ10BQ9H8M1 238 aa14.15□□□□□ -0.15
RPS28-203ENST00000600659 RNF122Q9H9V4 155 aa14.15□□□□□ -0.15
RPS28-203ENST00000600659 TRIM33Q9UPN9 1127 aa14.15□□□□□ -0.15
RPS28-203ENST00000600659 FREM1Q5H8C1 2179 aa14.14□□□□□ -0.15
RPS28-203ENST00000600659 SLC22A20A6NK97 555 aa14.14□□□□□ -0.15
RPS28-203ENST00000600659 FBP2O00757 339 aa14.14□□□□□ -0.15
RPS28-203ENST00000600659 EIF1AYO14602 144 aaKnown RBP14.14□□□□□ -0.15
RPS28-203ENST00000600659 AP3D1O14617 1153 aa14.14□□□□□ -0.15
RPS28-203ENST00000600659 AQP8O94778 261 aa14.14□□□□□ -0.15
RPS28-203ENST00000600659 NUDT14O95848 222 aa14.14□□□□□ -0.15
RPS28-203ENST00000600659 VIMP08670 466 aaKnown RBP14.14□□□□□ -0.15
RPS28-203ENST00000600659 TROVE2P10155 538 aaKnown RBP eCLIP14.14□□□□□ -0.15
RPS28-203ENST00000600659 EIF1P41567 113 aaKnown RBP14.14□□□□□ -0.15
RPS28-203ENST00000600659 CCR4P51679 360 aa14.14□□□□□ -0.15
RPS28-203ENST00000600659 ARFIP2P53365 341 aa14.14□□□□□ -0.15
RPS28-203ENST00000600659 PON3Q15166 354 aa14.14□□□□□ -0.15
RPS28-203ENST00000600659 MRPL2Q5T653 305 aaKnown RBP14.14□□□□□ -0.15
RPS28-203ENST00000600659 ZNF836Q6ZNA1 936 aa14.14□□□□□ -0.15
RPS28-203ENST00000600659 VRK2Q86Y07 508 aa14.14□□□□□ -0.15
RPS28-203ENST00000600659 OR10D3Q8NH80 312 aa14.14□□□□□ -0.15
RPS28-203ENST00000600659 TSPEARQ8WU66 669 aa14.14□□□□□ -0.15
RPS28-203ENST00000600659 INTS12Q96CB8 462 aaKnown RBP14.14□□□□□ -0.15
RPS28-203ENST00000600659 MTHFD2LQ9H903 347 aaPredicted RBP14.14□□□□□ -0.15
RPS28-203ENST00000600659 A4GALTQ9NPC4 353 aa14.14□□□□□ -0.15
RPS28-203ENST00000600659 SAR1AQ9NR31 198 aa14.14□□□□□ -0.15
RPS28-203ENST00000600659 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.14□□□□□ -0.15
RPS28-203ENST00000600659 ACER3Q9NUN7 267 aa14.14□□□□□ -0.15
RPS28-203ENST00000600659 LEF1Q9UJU2 399 aaPredicted RBP14.14□□□□□ -0.15
RPS28-203ENST00000600659 ZNF175Q9Y473 711 aa14.14□□□□□ -0.15
RPS28-203ENST00000600659 A0A1W2PNV4 684 aa14.13□□□□□ -0.15
RPS28-203ENST00000600659 DVL2O14641 736 aa14.13□□□□□ -0.15
RPS28-203ENST00000600659 TNFSF11O14788 317 aa14.13□□□□□ -0.15
RPS28-203ENST00000600659 CXCL13O43927 109 aa14.13□□□□□ -0.15
RPS28-203ENST00000600659 CYP7B1O75881 506 aa14.13□□□□□ -0.15
RPS28-203ENST00000600659 ARAFP10398 606 aa14.13□□□□□ -0.15
RPS28-203ENST00000600659 GPX2P18283 190 aa14.13□□□□□ -0.15
RPS28-203ENST00000600659 ASCL1P50553 236 aa14.13□□□□□ -0.15
RPS28-203ENST00000600659 CRISP3P54108 245 aa14.13□□□□□ -0.15
RPS28-203ENST00000600659 SESN3P58005 492 aa14.13□□□□□ -0.15
RPS28-203ENST00000600659 EEF1A1P68104 462 aaKnown RBP14.13□□□□□ -0.15
RPS28-203ENST00000600659 SELPLGQ14242 412 aa14.13□□□□□ -0.15
RPS28-203ENST00000600659 ADRM1Q16186 407 aa14.13□□□□□ -0.15
RPS28-203ENST00000600659 RUNDC3AQ59EK9 446 aa14.13□□□□□ -0.15
RPS28-203ENST00000600659 ESPNLQ6ZVH7 1005 aa14.13□□□□□ -0.15
RPS28-203ENST00000600659 DHDDSQ86SQ9 333 aa14.13□□□□□ -0.15
RPS28-203ENST00000600659 DMRTC2Q8IXT2 367 aaPredicted RBP14.13□□□□□ -0.15
RPS28-203ENST00000600659 CMIPQ8IY22 773 aa14.13□□□□□ -0.15
RPS28-203ENST00000600659 LILRA2Q8N149 483 aa14.13□□□□□ -0.15
RPS28-203ENST00000600659 OR2V1Q8NHB1 315 aa14.13□□□□□ -0.15
RPS28-203ENST00000600659 WDR60Q8WVS4 1066 aa14.13□□□□□ -0.15
RPS28-203ENST00000600659 ST8SIA1Q92185 356 aa14.13□□□□□ -0.15
RPS28-203ENST00000600659 PMM1Q92871 262 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms