RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 PLPPR5Q32ZL2 321 aa18.15■□□□□ 0.5
SHKBP1-222ENST00000600320 LCN8Q6JVE9 175 aa18.15■□□□□ 0.5
SHKBP1-222ENST00000600320 ZNF550Q7Z398 422 aa18.15■□□□□ 0.5
SHKBP1-222ENST00000600320 YTHDF3Q7Z739 585 aaKnown RBP18.15■□□□□ 0.5
SHKBP1-222ENST00000600320 RBM45Q8IUH3 476 aaKnown RBP18.15■□□□□ 0.5
SHKBP1-222ENST00000600320 ZNF440Q8IYI8 595 aa18.15■□□□□ 0.5
SHKBP1-222ENST00000600320 OR5M1Q8NGP8 315 aa18.15■□□□□ 0.5
SHKBP1-222ENST00000600320 VANGL1Q8TAA9 524 aaPredicted RBP18.15■□□□□ 0.5
SHKBP1-222ENST00000600320 POC1BQ8TC44 478 aa18.15■□□□□ 0.5
SHKBP1-222ENST00000600320 RASSF5Q8WWW0 418 aa18.15■□□□□ 0.5
SHKBP1-222ENST00000600320 RNF145Q96MT1 663 aa18.15■□□□□ 0.5
SHKBP1-222ENST00000600320 BARD1Q99728 777 aaKnown RBP18.15■□□□□ 0.5
SHKBP1-222ENST00000600320 MUC13Q9H3R2 512 aa18.15■□□□□ 0.5
SHKBP1-222ENST00000600320 ARMC7Q9H6L4 198 aa18.15■□□□□ 0.5
SHKBP1-222ENST00000600320 OLAHQ9NV23 265 aa18.15■□□□□ 0.5
SHKBP1-222ENST00000600320 ADPRHL2Q9NX46 363 aa18.15■□□□□ 0.5
SHKBP1-222ENST00000600320 TAS2R10Q9NYW0 307 aa18.15■□□□□ 0.5
SHKBP1-222ENST00000600320 SLC13A4Q9UKG4 626 aa18.15■□□□□ 0.5
SHKBP1-222ENST00000600320 BAG5Q9UL15 447 aa18.15■□□□□ 0.5
SHKBP1-222ENST00000600320 RPH3AQ9Y2J0 694 aaPredicted RBP18.15■□□□□ 0.5
SHKBP1-222ENST00000600320 V9GYQ6 96 aa18.15■□□□□ 0.5
SHKBP1-222ENST00000600320 SMG1Q96Q15 3661 aaKnown RBP18.14■□□□□ 0.49
SHKBP1-222ENST00000600320 SUV39H1O43463 412 aa18.14■□□□□ 0.49
SHKBP1-222ENST00000600320 SLC6A8P48029 635 aa18.14■□□□□ 0.49
SHKBP1-222ENST00000600320 RGS8P57771 180 aaPredicted RBP18.14■□□□□ 0.49
SHKBP1-222ENST00000600320 B3GALT5-AS1P59052 145 aa18.14■□□□□ 0.49
SHKBP1-222ENST00000600320 FOXF1Q12946 379 aa18.14■□□□□ 0.49
SHKBP1-222ENST00000600320 GANABQ14697 944 aaKnown RBP18.14■□□□□ 0.49
SHKBP1-222ENST00000600320 TMEM44Q2T9K0 475 aa18.14■□□□□ 0.49
SHKBP1-222ENST00000600320 ENPP6Q6UWR7 440 aa18.14■□□□□ 0.49
SHKBP1-222ENST00000600320 CARM1Q86X55 608 aa18.14■□□□□ 0.49
SHKBP1-222ENST00000600320 DHFR2Q86XF0 187 aa18.14■□□□□ 0.49
SHKBP1-222ENST00000600320 ZNF843Q8N446 348 aa18.14■□□□□ 0.49
SHKBP1-222ENST00000600320 OR52E4Q8NGH9 312 aa18.14■□□□□ 0.49
SHKBP1-222ENST00000600320 OR6T1Q8NGN1 323 aa18.14■□□□□ 0.49
SHKBP1-222ENST00000600320 OR14L1PQ8NHC6 308 aa18.14■□□□□ 0.49
SHKBP1-222ENST00000600320 PROX1Q92786 737 aa18.14■□□□□ 0.49
SHKBP1-222ENST00000600320 SLC35B4Q969S0 331 aa18.14■□□□□ 0.49
SHKBP1-222ENST00000600320 HSH2DQ96JZ2 352 aa18.14■□□□□ 0.49
SHKBP1-222ENST00000600320 GPR137Q96N19 417 aa18.14■□□□□ 0.49
SHKBP1-222ENST00000600320 ACKR4Q9NPB9 350 aa18.14■□□□□ 0.49
SHKBP1-222ENST00000600320 KLHL28Q9NXS3 571 aa18.14■□□□□ 0.49
SHKBP1-222ENST00000600320 RPS6KA6Q9UK32 745 aa18.14■□□□□ 0.49
SHKBP1-222ENST00000600320 POMPQ9Y244 141 aa18.14■□□□□ 0.49
SHKBP1-222ENST00000600320 SH3GLB1Q9Y371 365 aa18.14■□□□□ 0.49
SHKBP1-222ENST00000600320 MRPS18CQ9Y3D5 142 aaKnown RBP18.14■□□□□ 0.49
SHKBP1-222ENST00000600320 TCRBV5S2A0A599 114 aa18.13■□□□□ 0.49
SHKBP1-222ENST00000600320 ZNHIT1O43257 154 aa18.13■□□□□ 0.49
SHKBP1-222ENST00000600320 PRKD3O94806 890 aa18.13■□□□□ 0.49
SHKBP1-222ENST00000600320 IGHG3P01860 377 aa18.13■□□□□ 0.49
SHKBP1-222ENST00000600320 PRKCAP17252 672 aa18.13■□□□□ 0.49
SHKBP1-222ENST00000600320 PGCP20142 388 aa18.13■□□□□ 0.49
SHKBP1-222ENST00000600320 HTR2AP28223 471 aa18.13■□□□□ 0.49
SHKBP1-222ENST00000600320 OR1E2P47887 323 aa18.13■□□□□ 0.49
SHKBP1-222ENST00000600320 IDH2P48735 452 aaKnown RBP18.13■□□□□ 0.49
SHKBP1-222ENST00000600320 ZNF41P51814 821 aaPredicted RBP18.13■□□□□ 0.49
SHKBP1-222ENST00000600320 SESN3P58005 492 aa18.13■□□□□ 0.49
SHKBP1-222ENST00000600320 HSF1Q00613 529 aa18.13■□□□□ 0.49
SHKBP1-222ENST00000600320 TRAP1Q12931 704 aaKnown RBP18.13■□□□□ 0.49
SHKBP1-222ENST00000600320 TRILQ7L0X0 811 aa18.13■□□□□ 0.49
SHKBP1-222ENST00000600320 EID3Q8N140 333 aa18.13■□□□□ 0.49
SHKBP1-222ENST00000600320 CPT1CQ8TCG5 803 aa18.13■□□□□ 0.49
SHKBP1-222ENST00000600320 SLX1AQ9BQ83 275 aa18.13■□□□□ 0.49
SHKBP1-222ENST00000600320 MMADHCQ9H3L0 296 aaPredicted RBP18.13■□□□□ 0.49
SHKBP1-222ENST00000600320 SLC6A5Q9Y345 797 aa18.13■□□□□ 0.49
SHKBP1-222ENST00000600320 A0A087WZY1 265 aa18.12■□□□□ 0.49
SHKBP1-222ENST00000600320 TNFSF12-TNFSF13A0A0A6YY99 330 aa18.12■□□□□ 0.49
SHKBP1-222ENST00000600320 TRGV5A0A0B4J1U4 118 aa18.12■□□□□ 0.49
SHKBP1-222ENST00000600320 FAAHO00519 579 aa18.12■□□□□ 0.49
SHKBP1-222ENST00000600320 IFI44LQ53G44 452 aa18.12■□□□□ 0.49
SHKBP1-222ENST00000600320 TSPYL5Q86VY4 417 aaPredicted RBP18.12■□□□□ 0.49
SHKBP1-222ENST00000600320 ZNF563Q8TA94 476 aa18.12■□□□□ 0.49
SHKBP1-222ENST00000600320 LZICQ8WZA0 190 aa18.12■□□□□ 0.49
SHKBP1-222ENST00000600320 PLSCR2Q9NRY7 297 aa18.12■□□□□ 0.49
SHKBP1-222ENST00000600320 AGPAT4Q9NRZ5 378 aa18.12■□□□□ 0.49
SHKBP1-222ENST00000600320 ACER3Q9NUN7 267 aa18.12■□□□□ 0.49
SHKBP1-222ENST00000600320 SPRR3Q9UBC9 169 aa18.12■□□□□ 0.49
SHKBP1-222ENST00000600320 SAMD4AQ9UPU9 718 aaKnown RBP18.12■□□□□ 0.49
SHKBP1-222ENST00000600320 COL6A6A6NMZ7 2263 aa18.11■□□□□ 0.49
SHKBP1-222ENST00000600320 SPTA1P02549 2419 aa18.11■□□□□ 0.49
SHKBP1-222ENST00000600320 OR2M5A3KFT3 312 aa18.11■□□□□ 0.49
SHKBP1-222ENST00000600320 FAM47E-STBD1D6RA91 191 aa18.11■□□□□ 0.49
SHKBP1-222ENST00000600320 ETV2O00321 342 aaPredicted RBP18.11■□□□□ 0.49
SHKBP1-222ENST00000600320 NTN1O95631 604 aa18.11■□□□□ 0.49
SHKBP1-222ENST00000600320 PSMA4P25789 261 aaKnown RBP18.11■□□□□ 0.49
SHKBP1-222ENST00000600320 DLX5P56178 289 aa18.11■□□□□ 0.49
SHKBP1-222ENST00000600320 GLYR1Q49A26 553 aaPredicted RBP18.11■□□□□ 0.49
SHKBP1-222ENST00000600320 SLC25A53Q5H9E4 307 aa18.11■□□□□ 0.49
SHKBP1-222ENST00000600320 RAET1LQ5VY80 246 aa18.11■□□□□ 0.49
SHKBP1-222ENST00000600320 FGD2Q7Z6J4 655 aa18.11■□□□□ 0.49
SHKBP1-222ENST00000600320 CHERPQ8IWX8 916 aaKnown RBP18.11■□□□□ 0.49
SHKBP1-222ENST00000600320 CADM2Q8N3J6 435 aa18.11■□□□□ 0.49
SHKBP1-222ENST00000600320 DTNBP1Q96EV8 351 aa18.11■□□□□ 0.49
SHKBP1-222ENST00000600320 PYURFQ96I23 114 aa18.11■□□□□ 0.49
SHKBP1-222ENST00000600320 SFXN2Q96NB2 322 aa18.11■□□□□ 0.49
SHKBP1-222ENST00000600320 MCHR1Q99705 422 aa18.11■□□□□ 0.49
SHKBP1-222ENST00000600320 LDAHQ9H6V9 325 aa18.11■□□□□ 0.49
SHKBP1-222ENST00000600320 EVA1AQ9H8M9 152 aa18.11■□□□□ 0.49
SHKBP1-222ENST00000600320 CTPS2Q9NRF8 586 aa18.11■□□□□ 0.49
SHKBP1-222ENST00000600320 TESQ9UGI8 421 aaKnown RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms