RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 COLEC12Q5KU26 742 aa11.48□□□□□ -0.57
CHMP2A-206ENST00000600118 TSEN54Q7Z6J9 526 aaKnown RBP11.48□□□□□ -0.57
CHMP2A-206ENST00000600118 CARM1Q86X55 608 aa11.48□□□□□ -0.57
CHMP2A-206ENST00000600118 RBM45Q8IUH3 476 aaKnown RBP11.48□□□□□ -0.57
CHMP2A-206ENST00000600118 TMCO5AQ8N6Q1 288 aa11.48□□□□□ -0.57
CHMP2A-206ENST00000600118 POP5Q969H6 163 aaKnown RBP11.48□□□□□ -0.57
CHMP2A-206ENST00000600118 PYURFQ96I23 114 aa11.48□□□□□ -0.57
CHMP2A-206ENST00000600118 TPD52L3Q96J77 140 aa11.48□□□□□ -0.57
CHMP2A-206ENST00000600118 BBC3Q96PG8 261 aaPredicted RBP11.48□□□□□ -0.57
CHMP2A-206ENST00000600118 TRIM15Q9C019 465 aa11.48□□□□□ -0.57
CHMP2A-206ENST00000600118 ACKR4Q9NPB9 350 aa11.48□□□□□ -0.57
CHMP2A-206ENST00000600118 SLC9A8Q9Y2E8 581 aa11.48□□□□□ -0.57
CHMP2A-206ENST00000600118 SH3GLB1Q9Y371 365 aa11.48□□□□□ -0.57
CHMP2A-206ENST00000600118 SPTA1P02549 2419 aa11.48□□□□□ -0.57
CHMP2A-206ENST00000600118 BSNQ9UPA5 3926 aa11.48□□□□□ -0.57
CHMP2A-206ENST00000600118 IGSF10Q6WRI0 2623 aa11.47□□□□□ -0.57
CHMP2A-206ENST00000600118 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.47□□□□□ -0.57
CHMP2A-206ENST00000600118 GMFGO60234 142 aa11.47□□□□□ -0.57
CHMP2A-206ENST00000600118 WISP2O76076 250 aa11.47□□□□□ -0.57
CHMP2A-206ENST00000600118 WISP1O95388 367 aa11.47□□□□□ -0.57
CHMP2A-206ENST00000600118 STAMBPO95630 424 aa11.47□□□□□ -0.57
CHMP2A-206ENST00000600118 IGHG3P01860 377 aa11.47□□□□□ -0.57
CHMP2A-206ENST00000600118 PRKCAP17252 672 aa11.47□□□□□ -0.57
CHMP2A-206ENST00000600118 PSMA4P25789 261 aaKnown RBP11.47□□□□□ -0.57
CHMP2A-206ENST00000600118 GDF1P27539 372 aa11.47□□□□□ -0.57
CHMP2A-206ENST00000600118 RYKP34925 604 aa11.47□□□□□ -0.57
CHMP2A-206ENST00000600118 OR1E2P47887 323 aa11.47□□□□□ -0.57
CHMP2A-206ENST00000600118 B3GALT5-AS1P59052 145 aa11.47□□□□□ -0.57
CHMP2A-206ENST00000600118 ALDH6A1Q02252 535 aaKnown RBP11.47□□□□□ -0.57
CHMP2A-206ENST00000600118 SLC10A1Q14973 349 aa11.47□□□□□ -0.57
CHMP2A-206ENST00000600118 IQCCQ4KMZ1 466 aa11.47□□□□□ -0.57
CHMP2A-206ENST00000600118 CMPK2Q5EBM0 449 aa11.47□□□□□ -0.57
CHMP2A-206ENST00000600118 C1orf146Q5VVC0 180 aa11.47□□□□□ -0.57
CHMP2A-206ENST00000600118 TSPYL5Q86VY4 417 aaPredicted RBP11.47□□□□□ -0.57
CHMP2A-206ENST00000600118 ADGRG5Q8IZF4 528 aa11.47□□□□□ -0.57
CHMP2A-206ENST00000600118 CISD2Q8N5K1 135 aaKnown RBP11.47□□□□□ -0.57
CHMP2A-206ENST00000600118 LSMEM1Q8N8F7 131 aa11.47□□□□□ -0.57
CHMP2A-206ENST00000600118 FAM83FQ8NEG4 500 aaPredicted RBP11.47□□□□□ -0.57
CHMP2A-206ENST00000600118 VANGL1Q8TAA9 524 aaPredicted RBP11.47□□□□□ -0.57
CHMP2A-206ENST00000600118 POC1BQ8TC44 478 aa11.47□□□□□ -0.57
CHMP2A-206ENST00000600118 GEMIN6Q8WXD5 167 aaKnown RBP11.47□□□□□ -0.57
CHMP2A-206ENST00000600118 ST8SIA1Q92185 356 aa11.47□□□□□ -0.57
CHMP2A-206ENST00000600118 ZBTB8AQ96BR9 441 aa11.47□□□□□ -0.57
CHMP2A-206ENST00000600118 SNRNP40Q96DI7 357 aaKnown RBP11.47□□□□□ -0.57
CHMP2A-206ENST00000600118 DTNBP1Q96EV8 351 aa11.47□□□□□ -0.57
CHMP2A-206ENST00000600118 C7orf34Q96L11 122 aa11.47□□□□□ -0.57
CHMP2A-206ENST00000600118 LRGUKQ96M69 825 aa11.47□□□□□ -0.57
CHMP2A-206ENST00000600118 RAB3IPQ96QF0 476 aaPredicted RBP11.47□□□□□ -0.57
CHMP2A-206ENST00000600118 PLSCR2Q9NRY7 297 aa11.47□□□□□ -0.57
CHMP2A-206ENST00000600118 ACER3Q9NUN7 267 aa11.47□□□□□ -0.57
CHMP2A-206ENST00000600118 TAS2R10Q9NYW0 307 aa11.47□□□□□ -0.57
CHMP2A-206ENST00000600118 TESQ9UGI8 421 aaKnown RBP11.47□□□□□ -0.57
CHMP2A-206ENST00000600118 ANAPC2Q9UJX6 822 aa11.47□□□□□ -0.57
CHMP2A-206ENST00000600118 NBEAQ8NFP9 2946 aa11.47□□□□□ -0.57
CHMP2A-206ENST00000600118 ZFYVE26Q68DK2 2539 aa11.47□□□□□ -0.57
CHMP2A-206ENST00000600118 TFECO14948 347 aaPredicted RBP11.46□□□□□ -0.57
CHMP2A-206ENST00000600118 CDC40O60508 579 aaKnown RBP eCLIP11.46□□□□□ -0.57
CHMP2A-206ENST00000600118 CIB2O75838 187 aa11.46□□□□□ -0.57
CHMP2A-206ENST00000600118 UQCRBP14927 111 aa11.46□□□□□ -0.57
CHMP2A-206ENST00000600118 HK1P19367 917 aa11.46□□□□□ -0.57
CHMP2A-206ENST00000600118 ADH6P28332 368 aa11.46□□□□□ -0.57
CHMP2A-206ENST00000600118 SLC1A3P43003 542 aa11.46□□□□□ -0.57
CHMP2A-206ENST00000600118 IDH2P48735 452 aaKnown RBP11.46□□□□□ -0.57
CHMP2A-206ENST00000600118 ZNF41P51814 821 aaPredicted RBP11.46□□□□□ -0.57
CHMP2A-206ENST00000600118 SESN3P58005 492 aa11.46□□□□□ -0.57
CHMP2A-206ENST00000600118 FOXK1P85037 733 aa11.46□□□□□ -0.57
CHMP2A-206ENST00000600118 NFATC3Q12968 1075 aa11.46□□□□□ -0.57
CHMP2A-206ENST00000600118 CCNIQ14094 377 aa11.46□□□□□ -0.57
CHMP2A-206ENST00000600118 PRR30Q53SZ7 412 aaPredicted RBP11.46□□□□□ -0.57
CHMP2A-206ENST00000600118 WBP2NLQ6ICG8 309 aa11.46□□□□□ -0.57
CHMP2A-206ENST00000600118 FAM180AQ6UWF9 173 aa11.46□□□□□ -0.57
CHMP2A-206ENST00000600118 FKBP9P1Q75LS8 142 aa11.46□□□□□ -0.57
CHMP2A-206ENST00000600118 YRDCQ86U90 279 aaKnown RBP11.46□□□□□ -0.57
CHMP2A-206ENST00000600118 RANBP3LQ86VV4 465 aaPredicted RBP11.46□□□□□ -0.57
CHMP2A-206ENST00000600118 GTPBP8Q8N3Z3 284 aaPredicted RBP11.46□□□□□ -0.57
CHMP2A-206ENST00000600118 FAR1Q8WVX9 515 aa11.46□□□□□ -0.57
CHMP2A-206ENST00000600118 TMEM234Q8WY98 164 aa11.46□□□□□ -0.57
CHMP2A-206ENST00000600118 NR4A3Q92570 626 aa11.46□□□□□ -0.57
CHMP2A-206ENST00000600118 MRGPRX4Q96LA9 322 aa11.46□□□□□ -0.57
CHMP2A-206ENST00000600118 NPAS1Q99742 590 aa11.46□□□□□ -0.57
CHMP2A-206ENST00000600118 SLX1AQ9BQ83 275 aa11.46□□□□□ -0.57
CHMP2A-206ENST00000600118 ZNF559Q9BR84 538 aa11.46□□□□□ -0.57
CHMP2A-206ENST00000600118 PRR14Q9BWN1 585 aa11.46□□□□□ -0.57
CHMP2A-206ENST00000600118 TRIM2Q9C040 744 aa11.46□□□□□ -0.57
CHMP2A-206ENST00000600118 AMBRA1Q9C0C7 1298 aa11.46□□□□□ -0.57
CHMP2A-206ENST00000600118 ADAM19Q9H013 955 aa11.46□□□□□ -0.57
CHMP2A-206ENST00000600118 MAGIXQ9H6Y5 334 aa11.46□□□□□ -0.57
CHMP2A-206ENST00000600118 DKKL1Q9UK85 242 aa11.46□□□□□ -0.57
CHMP2A-206ENST00000600118 VDAC3Q9Y277 283 aa11.46□□□□□ -0.57
CHMP2A-206ENST00000600118 V9GYQ6 96 aa11.46□□□□□ -0.57
CHMP2A-206ENST00000600118 BOD1L1Q8NFC6 3051 aa11.46□□□□□ -0.58
CHMP2A-206ENST00000600118 A0A1B0GVC2 190 aa11.45□□□□□ -0.58
CHMP2A-206ENST00000600118 A0A1B0GWA3 101 aa11.45□□□□□ -0.58
CHMP2A-206ENST00000600118 DHRS12A0PJE2 317 aa11.45□□□□□ -0.58
CHMP2A-206ENST00000600118 FAM47E-STBD1D6RA91 191 aa11.45□□□□□ -0.58
CHMP2A-206ENST00000600118 TRAPPC6AO75865 159 aa11.45□□□□□ -0.58
CHMP2A-206ENST00000600118 LYPD3O95274 346 aa11.45□□□□□ -0.58
CHMP2A-206ENST00000600118 NUDT14O95848 222 aa11.45□□□□□ -0.58
CHMP2A-206ENST00000600118 THY1P04216 161 aa11.45□□□□□ -0.58
CHMP2A-206ENST00000600118 IFNW1P05000 195 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms