RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 PMM1Q92871 262 aa25.36■■□□□ 1.65
SSBP4-206ENST00000599699 LRRC46Q96FV0 321 aa25.36■■□□□ 1.65
SSBP4-206ENST00000599699 MRGPRX4Q96LA9 322 aa25.36■■□□□ 1.65
SSBP4-206ENST00000599699 SPOCK3Q9BQ16 436 aa25.36■■□□□ 1.65
SSBP4-206ENST00000599699 CCDC134Q9H6E4 229 aa25.36■■□□□ 1.65
SSBP4-206ENST00000599699 SLC25A37Q9NYZ2 338 aa25.36■■□□□ 1.65
SSBP4-206ENST00000599699 LEF1Q9UJU2 399 aaPredicted RBP25.36■■□□□ 1.65
SSBP4-206ENST00000599699 EEF1E1-BLOC1S5C9J1V9 151 aa25.35■■□□□ 1.65
SSBP4-206ENST00000599699 ANGPT2O15123 496 aa25.35■■□□□ 1.65
SSBP4-206ENST00000599699 EEF1E1O43324 174 aaKnown RBP25.35■■□□□ 1.65
SSBP4-206ENST00000599699 TFPTP0C1Z6 253 aa25.35■■□□□ 1.65
SSBP4-206ENST00000599699 HOXB9P17482 250 aaPredicted RBP25.35■■□□□ 1.65
SSBP4-206ENST00000599699 ELK4P28324 431 aa25.35■■□□□ 1.65
SSBP4-206ENST00000599699 RYKP34925 604 aa25.35■■□□□ 1.65
SSBP4-206ENST00000599699 SFTPDP35247 375 aa25.35■■□□□ 1.65
SSBP4-206ENST00000599699 FADDQ13158 208 aa25.35■■□□□ 1.65
SSBP4-206ENST00000599699 PDSS1Q5T2R2 415 aa25.35■■□□□ 1.65
SSBP4-206ENST00000599699 OR2A2Q6IF42 318 aa25.35■■□□□ 1.65
SSBP4-206ENST00000599699 OR10D3Q8NH80 312 aa25.35■■□□□ 1.65
SSBP4-206ENST00000599699 FNDC9Q8TBE3 224 aa25.35■■□□□ 1.65
SSBP4-206ENST00000599699 SFXN3Q9BWM7 321 aa25.35■■□□□ 1.65
SSBP4-206ENST00000599699 PRRG4Q9BZD6 226 aa25.35■■□□□ 1.65
SSBP4-206ENST00000599699 ENKD1Q9H0I2 346 aa25.35■■□□□ 1.65
SSBP4-206ENST00000599699 CACYBPQ9HB71 228 aaKnown RBP25.35■■□□□ 1.65
SSBP4-206ENST00000599699 NDUFAF1Q9Y375 327 aa25.35■■□□□ 1.65
SSBP4-206ENST00000599699 ZNF175Q9Y473 711 aa25.35■■□□□ 1.65
SSBP4-206ENST00000599699 TNFSF12-TNFSF13A0A0A6YY99 330 aa25.34■■□□□ 1.65
SSBP4-206ENST00000599699 TNFSF11O14788 317 aa25.34■■□□□ 1.65
SSBP4-206ENST00000599699 BCAS1O75363 584 aaPredicted RBP25.34■■□□□ 1.65
SSBP4-206ENST00000599699 IL18BPO95998 194 aa25.34■■□□□ 1.65
SSBP4-206ENST00000599699 DBIP07108 87 aaKnown RBP25.34■■□□□ 1.65
SSBP4-206ENST00000599699 PPIBP23284 216 aaKnown RBP25.34■■□□□ 1.65
SSBP4-206ENST00000599699 UQCRC1P31930 480 aa25.34■■□□□ 1.65
SSBP4-206ENST00000599699 ASCL1P50553 236 aa25.34■■□□□ 1.65
SSBP4-206ENST00000599699 MAPK11Q15759 364 aa25.34■■□□□ 1.65
SSBP4-206ENST00000599699 HBMQ6B0K9 141 aa25.34■■□□□ 1.65
SSBP4-206ENST00000599699 CGB2Q6NT52 195 aa25.34■■□□□ 1.65
SSBP4-206ENST00000599699 POMZP3Q6PJE2 187 aa25.34■■□□□ 1.65
SSBP4-206ENST00000599699 ESPNLQ6ZVH7 1005 aa25.34■■□□□ 1.65
SSBP4-206ENST00000599699 MCEMP1Q8IX19 187 aa25.34■■□□□ 1.65
SSBP4-206ENST00000599699 MSRB3Q8IXL7 192 aa25.34■■□□□ 1.65
SSBP4-206ENST00000599699 CMIPQ8IY22 773 aa25.34■■□□□ 1.65
SSBP4-206ENST00000599699 FAM71CQ8NEG0 241 aa25.34■■□□□ 1.65
SSBP4-206ENST00000599699 OR2V1Q8NHB1 315 aa25.34■■□□□ 1.65
SSBP4-206ENST00000599699 ZNF563Q8TA94 476 aa25.34■■□□□ 1.65
SSBP4-206ENST00000599699 TMEM234Q8WY98 164 aa25.34■■□□□ 1.65
SSBP4-206ENST00000599699 TMEM19Q96HH6 336 aa25.34■■□□□ 1.65
SSBP4-206ENST00000599699 KLHL15Q96M94 604 aa25.34■■□□□ 1.65
SSBP4-206ENST00000599699 VAPAQ9P0L0 249 aa25.34■■□□□ 1.65
SSBP4-206ENST00000599699 ADGRG4Q8IZF6 3080 aa25.33■■□□□ 1.65
SSBP4-206ENST00000599699 GJE1A6NN92 205 aa25.33■■□□□ 1.65
SSBP4-206ENST00000599699 NUDT7P0C024 238 aa25.33■■□□□ 1.65
SSBP4-206ENST00000599699 RPS26P11Q5JNZ5 115 aaPredicted RBP25.33■■□□□ 1.65
SSBP4-206ENST00000599699 ST8SIA1Q92185 356 aa25.33■■□□□ 1.65
SSBP4-206ENST00000599699 CNOT9Q92600 299 aaKnown RBP25.33■■□□□ 1.65
SSBP4-206ENST00000599699 ZNF524Q96C55 264 aa25.33■■□□□ 1.65
SSBP4-206ENST00000599699 TREX2Q9BQ50 279 aaPredicted RBP25.33■■□□□ 1.65
SSBP4-206ENST00000599699 PAQR5Q9NXK6 330 aaPredicted RBP25.33■■□□□ 1.65
SSBP4-206ENST00000599699 MCTS1Q9ULC4 181 aaKnown RBP25.33■■□□□ 1.65
SSBP4-206ENST00000599699 A0A0J9YW62 118 aa25.32■■□□□ 1.64
SSBP4-206ENST00000599699 EVPLLA8MZ36 301 aa25.32■■□□□ 1.64
SSBP4-206ENST00000599699 C5orf58C9J3I9 102 aa25.32■■□□□ 1.64
SSBP4-206ENST00000599699 ADAMDEC1O15204 470 aa25.32■■□□□ 1.64
SSBP4-206ENST00000599699 CXCL13O43927 109 aa25.32■■□□□ 1.64
SSBP4-206ENST00000599699 SYNGR4O95473 234 aa25.32■■□□□ 1.64
SSBP4-206ENST00000599699 FCGR2AP12318 317 aa25.32■■□□□ 1.64
SSBP4-206ENST00000599699 SESN3P58005 492 aa25.32■■□□□ 1.64
SSBP4-206ENST00000599699 MERTKQ12866 999 aa25.32■■□□□ 1.64
SSBP4-206ENST00000599699 CTU2Q2VPK5 515 aaKnown RBP25.32■■□□□ 1.64
SSBP4-206ENST00000599699 TMEM176BQ3YBM2 270 aaPredicted RBP25.32■■□□□ 1.64
SSBP4-206ENST00000599699 SLC25A53Q5H9E4 307 aa25.32■■□□□ 1.64
SSBP4-206ENST00000599699 CNEP1R1Q8N9A8 125 aa25.32■■□□□ 1.64
SSBP4-206ENST00000599699 OR52P1PQ8NH57 321 aa25.32■■□□□ 1.64
SSBP4-206ENST00000599699 MAL2Q969L2 176 aa25.32■■□□□ 1.64
SSBP4-206ENST00000599699 ADGRG7Q96K78 797 aa25.32■■□□□ 1.64
SSBP4-206ENST00000599699 DOCK7Q96N67 2140 aa25.32■■□□□ 1.64
SSBP4-206ENST00000599699 A4GALTQ9NPC4 353 aa25.32■■□□□ 1.64
SSBP4-206ENST00000599699 EXOSC3Q9NQT5 275 aaKnown RBP25.32■■□□□ 1.64
SSBP4-206ENST00000599699 A0A0G2JPF8 293 aa25.31■■□□□ 1.64
SSBP4-206ENST00000599699 A0A1W2PNV4 684 aa25.31■■□□□ 1.64
SSBP4-206ENST00000599699 HNRNPCL2B2RXH8 293 aa25.31■■□□□ 1.64
SSBP4-206ENST00000599699 HNRNPCL3B7ZW38 293 aa25.31■■□□□ 1.64
SSBP4-206ENST00000599699 EFNA2O43921 213 aa25.31■■□□□ 1.64
SSBP4-206ENST00000599699 HNRNPCL1O60812 293 aaKnown RBP25.31■■□□□ 1.64
SSBP4-206ENST00000599699 DNAJA2O60884 412 aa25.31■■□□□ 1.64
SSBP4-206ENST00000599699 NTN1O95631 604 aa25.31■■□□□ 1.64
SSBP4-206ENST00000599699 HNRNPCL4P0DMR1 293 aa25.31■■□□□ 1.64
SSBP4-206ENST00000599699 NID1P14543 1247 aa25.31■■□□□ 1.64
SSBP4-206ENST00000599699 RPS4Y1P22090 263 aaKnown RBP25.31■■□□□ 1.64
SSBP4-206ENST00000599699 SHC1P29353 583 aa25.31■■□□□ 1.64
SSBP4-206ENST00000599699 SLC6A8P48029 635 aa25.31■■□□□ 1.64
SSBP4-206ENST00000599699 CARD18P57730 90 aa25.31■■□□□ 1.64
SSBP4-206ENST00000599699 EEF1A1P68104 462 aaKnown RBP25.31■■□□□ 1.64
SSBP4-206ENST00000599699 SELENBP1Q13228 472 aa25.31■■□□□ 1.64
SSBP4-206ENST00000599699 LIN52Q52LA3 116 aa25.31■■□□□ 1.64
SSBP4-206ENST00000599699 GCNT6Q5T4J0 391 aa25.31■■□□□ 1.64
SSBP4-206ENST00000599699 EEF1A1P5Q5VTE0 462 aa25.31■■□□□ 1.64
SSBP4-206ENST00000599699 OSTF1Q92882 214 aa25.31■■□□□ 1.64
SSBP4-206ENST00000599699 SERINC1Q9NRX5 453 aa25.31■■□□□ 1.64
SSBP4-206ENST00000599699 CORO2BQ9UQ03 480 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms