RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 PIGUQ9H490 435 aa16.77■□□□□ 0.28
PNKP-213ENST00000599543 FANCFQ9NPI8 374 aa16.77■□□□□ 0.28
PNKP-213ENST00000599543 PLSCR4Q9NRQ2 329 aa16.77■□□□□ 0.28
PNKP-213ENST00000599543 GLRX2Q9NS18 164 aa16.77■□□□□ 0.28
PNKP-213ENST00000599543 GIN1Q9NXP7 522 aa16.77■□□□□ 0.28
PNKP-213ENST00000599543 KRT16P08779 473 aa16.76■□□□□ 0.27
PNKP-213ENST00000599543 ADSLP30566 484 aaPredicted RBP16.76■□□□□ 0.27
PNKP-213ENST00000599543 EIF1P41567 113 aaKnown RBP16.76■□□□□ 0.27
PNKP-213ENST00000599543 CCT3P49368 545 aaKnown RBP16.76■□□□□ 0.27
PNKP-213ENST00000599543 CLNS1AP54105 237 aaKnown RBP16.76■□□□□ 0.27
PNKP-213ENST00000599543 GYS2P54840 703 aa16.76■□□□□ 0.27
PNKP-213ENST00000599543 CASP9P55211 416 aa16.76■□□□□ 0.27
PNKP-213ENST00000599543 Q5PR19 223 aa16.76■□□□□ 0.27
PNKP-213ENST00000599543 ANKRD34AQ69YU3 496 aa16.76■□□□□ 0.27
PNKP-213ENST00000599543 CGB2Q6NT52 195 aa16.76■□□□□ 0.27
PNKP-213ENST00000599543 CDC73Q6P1J9 531 aa16.76■□□□□ 0.27
PNKP-213ENST00000599543 MTERF4Q7Z6M4 381 aaKnown RBP16.76■□□□□ 0.27
PNKP-213ENST00000599543 KRTAP1-3Q8IUG1 177 aa16.76■□□□□ 0.27
PNKP-213ENST00000599543 NATD1Q8N6N6 113 aa16.76■□□□□ 0.27
PNKP-213ENST00000599543 PHOSPHO1Q8TCT1 267 aa16.76■□□□□ 0.27
PNKP-213ENST00000599543 ADAMTS15Q8TE58 950 aa16.76■□□□□ 0.27
PNKP-213ENST00000599543 PIP5K1AQ99755 562 aa16.76■□□□□ 0.27
PNKP-213ENST00000599543 ACTRT3Q9BYD9 372 aa16.76■□□□□ 0.27
PNKP-213ENST00000599543 FAF1Q9UNN5 650 aaPredicted RBP16.76■□□□□ 0.27
PNKP-213ENST00000599543 A0A0G2JND7 137 aa16.75■□□□□ 0.27
PNKP-213ENST00000599543 H3BNH8 94 aa16.75■□□□□ 0.27
PNKP-213ENST00000599543 SCN2BO60939 215 aa16.75■□□□□ 0.27
PNKP-213ENST00000599543 TGDSO95455 350 aa16.75■□□□□ 0.27
PNKP-213ENST00000599543 NUDT14O95848 222 aa16.75■□□□□ 0.27
PNKP-213ENST00000599543 IDO1P14902 403 aa16.75■□□□□ 0.27
PNKP-213ENST00000599543 PPP3CBP16298 524 aa16.75■□□□□ 0.27
PNKP-213ENST00000599543 HOXB4P17483 251 aaPredicted RBP16.75■□□□□ 0.27
PNKP-213ENST00000599543 ELK4P28324 431 aa16.75■□□□□ 0.27
PNKP-213ENST00000599543 MDH1P40925 334 aaKnown RBP16.75■□□□□ 0.27
PNKP-213ENST00000599543 RPS26P62854 115 aaKnown RBP16.75■□□□□ 0.27
PNKP-213ENST00000599543 ZNF117Q03924 483 aa16.75■□□□□ 0.27
PNKP-213ENST00000599543 ACKR1Q16570 336 aa16.75■□□□□ 0.27
PNKP-213ENST00000599543 PDCD4Q53EL6 469 aaKnown RBP16.75■□□□□ 0.27
PNKP-213ENST00000599543 DCST2Q5T1A1 773 aa16.75■□□□□ 0.27
PNKP-213ENST00000599543 C20orf204Q6ZNR8 217 aa16.75■□□□□ 0.27
PNKP-213ENST00000599543 STK32CQ86UX6 486 aa16.75■□□□□ 0.27
PNKP-213ENST00000599543 LILRA2Q8N149 483 aa16.75■□□□□ 0.27
PNKP-213ENST00000599543 LRRC75A-AS1Q8N1F1 130 aa16.75■□□□□ 0.27
PNKP-213ENST00000599543 PSMA8Q8TAA3 256 aa16.75■□□□□ 0.27
PNKP-213ENST00000599543 POC1BQ8TC44 478 aa16.75■□□□□ 0.27
PNKP-213ENST00000599543 TESCQ96BS2 214 aa16.75■□□□□ 0.27
PNKP-213ENST00000599543 REXO5Q96IC2 774 aaKnown RBP16.75■□□□□ 0.27
PNKP-213ENST00000599543 KLHL15Q96M94 604 aa16.75■□□□□ 0.27
PNKP-213ENST00000599543 HS3ST6Q96QI5 342 aa16.75■□□□□ 0.27
PNKP-213ENST00000599543 ZBTB18Q99592 522 aa16.75■□□□□ 0.27
PNKP-213ENST00000599543 INPP5KQ9BT40 448 aa16.75■□□□□ 0.27
PNKP-213ENST00000599543 HOXD1Q9GZZ0 328 aa16.75■□□□□ 0.27
PNKP-213ENST00000599543 PRR14LQ5THK1 2151 aa16.74■□□□□ 0.27
PNKP-213ENST00000599543 A0A0J9YW62 118 aa16.74■□□□□ 0.27
PNKP-213ENST00000599543 SLC22A3O75751 556 aa16.74■□□□□ 0.27
PNKP-213ENST00000599543 SOX30O94993 753 aa16.74■□□□□ 0.27
PNKP-213ENST00000599543 INHBBP09529 407 aa16.74■□□□□ 0.27
PNKP-213ENST00000599543 LINGO3P0C6S8 592 aa16.74■□□□□ 0.27
PNKP-213ENST00000599543 PABPC4LP0CB38 370 aaKnown RBP16.74■□□□□ 0.27
PNKP-213ENST00000599543 IL11P20809 199 aa16.74■□□□□ 0.27
PNKP-213ENST00000599543 SFTPDP35247 375 aa16.74■□□□□ 0.27
PNKP-213ENST00000599543 FOXF1Q12946 379 aa16.74■□□□□ 0.27
PNKP-213ENST00000599543 GSTA3Q16772 222 aa16.74■□□□□ 0.27
PNKP-213ENST00000599543 GTF2IRD2BQ6EKJ0 949 aa16.74■□□□□ 0.27
PNKP-213ENST00000599543 DNAJC14Q6Y2X3 702 aaPredicted RBP16.74■□□□□ 0.27
PNKP-213ENST00000599543 BEND4Q6ZU67 534 aa16.74■□□□□ 0.27
PNKP-213ENST00000599543 C22orf34Q6ZV56 151 aa16.74■□□□□ 0.27
PNKP-213ENST00000599543 GTF2IRD2Q86UP8 949 aa16.74■□□□□ 0.27
PNKP-213ENST00000599543 MIER2Q8N344 545 aa16.74■□□□□ 0.27
PNKP-213ENST00000599543 OR8J2Q8NGG1 315 aa16.74■□□□□ 0.27
PNKP-213ENST00000599543 SFXN5Q8TD22 340 aa16.74■□□□□ 0.27
PNKP-213ENST00000599543 MOAP1Q96BY2 351 aa16.74■□□□□ 0.27
PNKP-213ENST00000599543 OR52E6Q96RD3 313 aa16.74■□□□□ 0.27
PNKP-213ENST00000599543 KLHDC3Q9BQ90 382 aa16.74■□□□□ 0.27
PNKP-213ENST00000599543 CCDC28BQ9BUN5 200 aa16.74■□□□□ 0.27
PNKP-213ENST00000599543 TMEM120AQ9BXJ8 343 aa16.74■□□□□ 0.27
PNKP-213ENST00000599543 TIGARQ9NQ88 270 aa16.74■□□□□ 0.27
PNKP-213ENST00000599543 TLN2Q9Y4G6 2542 aa16.74■□□□□ 0.27
PNKP-213ENST00000599543 FREM1Q5H8C1 2179 aa16.73■□□□□ 0.27
PNKP-213ENST00000599543 NPIPA5A0A0B4J1W7 369 aa16.73■□□□□ 0.27
PNKP-213ENST00000599543 RNF103-CHMP3A0A140T963 221 aa16.73■□□□□ 0.27
PNKP-213ENST00000599543 GJE1A6NN92 205 aa16.73■□□□□ 0.27
PNKP-213ENST00000599543 NPIPA7E9PJI5 369 aa16.73■□□□□ 0.27
PNKP-213ENST00000599543 RNASET2O00584 256 aaKnown RBP16.73■□□□□ 0.27
PNKP-213ENST00000599543 GSNP06396 782 aa16.73■□□□□ 0.27
PNKP-213ENST00000599543 NPIPA8P0DM63 369 aa16.73■□□□□ 0.27
PNKP-213ENST00000599543 NCF2P19878 526 aaPredicted RBP16.73■□□□□ 0.27
PNKP-213ENST00000599543 AGTR1P30556 359 aa16.73■□□□□ 0.27
PNKP-213ENST00000599543 CDKN2CP42773 168 aa16.73■□□□□ 0.27
PNKP-213ENST00000599543 RNF144AP50876 292 aaPredicted RBP16.73■□□□□ 0.27
PNKP-213ENST00000599543 P2RX1P51575 399 aa16.73■□□□□ 0.27
PNKP-213ENST00000599543 CARD18P57730 90 aa16.73■□□□□ 0.27
PNKP-213ENST00000599543 ZNF239Q16600 458 aaKnown RBP16.73■□□□□ 0.27
PNKP-213ENST00000599543 TIGD2Q4W5G0 525 aa16.73■□□□□ 0.27
PNKP-213ENST00000599543 KLHL26Q53HC5 615 aa16.73■□□□□ 0.27
PNKP-213ENST00000599543 BEX5Q5H9J7 111 aa16.73■□□□□ 0.27
PNKP-213ENST00000599543 CBLN3Q6UW01 205 aa16.73■□□□□ 0.27
PNKP-213ENST00000599543 STAC2Q6ZMT1 411 aa16.73■□□□□ 0.27
PNKP-213ENST00000599543 ZNF614Q8N883 585 aa16.73■□□□□ 0.27
PNKP-213ENST00000599543 OSTF1Q92882 214 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms