RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 ICAM5Q9UMF0 924 aa12.72□□□□□ -0.37
LIG1-218ENST00000599322 PROCRQ9UNN8 238 aa12.72□□□□□ -0.37
LIG1-218ENST00000599322 TRIM33Q9UPN9 1127 aa12.72□□□□□ -0.37
LIG1-218ENST00000599322 POLQO75417 2590 aa12.72□□□□□ -0.37
LIG1-218ENST00000599322 NUP214P35658 2090 aaPredicted RBP12.71□□□□□ -0.37
LIG1-218ENST00000599322 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.71□□□□□ -0.37
LIG1-218ENST00000599322 A8MXE2 369 aa12.71□□□□□ -0.37
LIG1-218ENST00000599322 H0YC42 278 aa12.71□□□□□ -0.37
LIG1-218ENST00000599322 TNFSF11O14788 317 aa12.71□□□□□ -0.37
LIG1-218ENST00000599322 CXCL13O43927 109 aa12.71□□□□□ -0.37
LIG1-218ENST00000599322 KIAA0513O60268 411 aa12.71□□□□□ -0.37
LIG1-218ENST00000599322 UGT2B17O75795 530 aa12.71□□□□□ -0.37
LIG1-218ENST00000599322 OPN1LWP04000 364 aa12.71□□□□□ -0.37
LIG1-218ENST00000599322 UBTFL6P0CB48 400 aaPredicted RBP12.71□□□□□ -0.37
LIG1-218ENST00000599322 ZCCHC18P0CG32 403 aa12.71□□□□□ -0.37
LIG1-218ENST00000599322 IL7RP16871 459 aa12.71□□□□□ -0.37
LIG1-218ENST00000599322 FKBP2P26885 142 aaKnown RBP12.71□□□□□ -0.37
LIG1-218ENST00000599322 IDH3AP50213 366 aa12.71□□□□□ -0.37
LIG1-218ENST00000599322 RNF144AP50876 292 aaPredicted RBP12.71□□□□□ -0.37
LIG1-218ENST00000599322 TPD52P55327 224 aaPredicted RBP12.71□□□□□ -0.37
LIG1-218ENST00000599322 FOXF1Q12946 379 aa12.71□□□□□ -0.37
LIG1-218ENST00000599322 SELENBP1Q13228 472 aa12.71□□□□□ -0.37
LIG1-218ENST00000599322 QPRTQ15274 297 aa12.71□□□□□ -0.37
LIG1-218ENST00000599322 TIGD2Q4W5G0 525 aa12.71□□□□□ -0.37
LIG1-218ENST00000599322 HSP90B2PQ58FF3 399 aa12.71□□□□□ -0.37
LIG1-218ENST00000599322 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.71□□□□□ -0.37
LIG1-218ENST00000599322 CBLN3Q6UW01 205 aa12.71□□□□□ -0.37
LIG1-218ENST00000599322 DNAJC14Q6Y2X3 702 aaPredicted RBP12.71□□□□□ -0.37
LIG1-218ENST00000599322 LRRC74BQ6ZQY2 392 aa12.71□□□□□ -0.37
LIG1-218ENST00000599322 FAM214BQ7L5A3 538 aa12.71□□□□□ -0.37
LIG1-218ENST00000599322 GGNQ86UU5 652 aa12.71□□□□□ -0.37
LIG1-218ENST00000599322 CMIPQ8IY22 773 aa12.71□□□□□ -0.37
LIG1-218ENST00000599322 PEX5LQ8IYB4 626 aa12.71□□□□□ -0.37
LIG1-218ENST00000599322 ARFGAP2Q8N6H7 521 aa12.71□□□□□ -0.37
LIG1-218ENST00000599322 PNPT1Q8TCS8 783 aaKnown RBP12.71□□□□□ -0.37
LIG1-218ENST00000599322 GPR119Q8TDV5 335 aa12.71□□□□□ -0.37
LIG1-218ENST00000599322 CPNE4Q96A23 557 aaPredicted RBP12.71□□□□□ -0.37
LIG1-218ENST00000599322 GMPPAQ96IJ6 420 aaPredicted RBP12.71□□□□□ -0.37
LIG1-218ENST00000599322 SERHL2Q9H4I8 314 aa12.71□□□□□ -0.37
LIG1-218ENST00000599322 RNF122Q9H9V4 155 aa12.71□□□□□ -0.37
LIG1-218ENST00000599322 SLCO1B3Q9NPD5 702 aa12.71□□□□□ -0.37
LIG1-218ENST00000599322 DNAJB12Q9NXW2 375 aaKnown RBP12.71□□□□□ -0.37
LIG1-218ENST00000599322 ELOVL5Q9NYP7 299 aa12.71□□□□□ -0.37
LIG1-218ENST00000599322 JKAMPQ9P055 326 aa12.71□□□□□ -0.37
LIG1-218ENST00000599322 ZNF232Q9UNY5 417 aa12.71□□□□□ -0.37
LIG1-218ENST00000599322 ANKRD17O75179 2603 aaKnown RBP12.71□□□□□ -0.38
LIG1-218ENST00000599322 HMGN4O00479 90 aa12.7□□□□□ -0.38
LIG1-218ENST00000599322 ADAMDEC1O15204 470 aa12.7□□□□□ -0.38
LIG1-218ENST00000599322 GOSR1O95249 250 aa12.7□□□□□ -0.38
LIG1-218ENST00000599322 H6PDO95479 791 aa12.7□□□□□ -0.38
LIG1-218ENST00000599322 DBIP07108 87 aaKnown RBP12.7□□□□□ -0.38
LIG1-218ENST00000599322 EPXP11678 715 aa12.7□□□□□ -0.38
LIG1-218ENST00000599322 PRKCAP17252 672 aa12.7□□□□□ -0.38
LIG1-218ENST00000599322 KCNJ10P78508 379 aa12.7□□□□□ -0.38
LIG1-218ENST00000599322 CHRNEQ04844 493 aa12.7□□□□□ -0.38
LIG1-218ENST00000599322 RNPS1Q15287 305 aaKnown RBP12.7□□□□□ -0.38
LIG1-218ENST00000599322 ZSWIM7Q19AV6 140 aa12.7□□□□□ -0.38
LIG1-218ENST00000599322 TMEM176BQ3YBM2 270 aaPredicted RBP12.7□□□□□ -0.38
LIG1-218ENST00000599322 TMEM201Q5SNT2 666 aa12.7□□□□□ -0.38
LIG1-218ENST00000599322 TYW3Q6IPR3 259 aaKnown RBP12.7□□□□□ -0.38
LIG1-218ENST00000599322 POMZP3Q6PJE2 187 aa12.7□□□□□ -0.38
LIG1-218ENST00000599322 PLXDC2Q6UX71 529 aa12.7□□□□□ -0.38
LIG1-218ENST00000599322 MAVSQ7Z434 540 aa12.7□□□□□ -0.38
LIG1-218ENST00000599322 CKAP2Q8WWK9 683 aa12.7□□□□□ -0.38
LIG1-218ENST00000599322 ZHX1-C8orf76Q96EF9 292 aa12.7□□□□□ -0.38
LIG1-218ENST00000599322 SIKE1Q9BRV8 207 aa12.7□□□□□ -0.38
LIG1-218ENST00000599322 TACO1Q9BSH4 297 aaKnown RBP12.7□□□□□ -0.38
LIG1-218ENST00000599322 POLDIP3Q9BY77 421 aaKnown RBP12.7□□□□□ -0.38
LIG1-218ENST00000599322 SAP130Q9H0E3 1048 aa12.7□□□□□ -0.38
LIG1-218ENST00000599322 TMEM45AQ9NWC5 275 aa12.7□□□□□ -0.38
LIG1-218ENST00000599322 GALNT8Q9NY28 637 aa12.7□□□□□ -0.38
LIG1-218ENST00000599322 CRIM1Q9NZV1 1036 aa12.7□□□□□ -0.38
LIG1-218ENST00000599322 HIVEP1P15822 2718 aa12.69□□□□□ -0.38
LIG1-218ENST00000599322 A0A0J9YW62 118 aa12.69□□□□□ -0.38
LIG1-218ENST00000599322 C5orf58C9J3I9 102 aa12.69□□□□□ -0.38
LIG1-218ENST00000599322 TNFSF13O75888 250 aa12.69□□□□□ -0.38
LIG1-218ENST00000599322 TFPIP10646 304 aa12.69□□□□□ -0.38
LIG1-218ENST00000599322 CD8BP10966 210 aa12.69□□□□□ -0.38
LIG1-218ENST00000599322 POU2F1P14859 743 aa12.69□□□□□ -0.38
LIG1-218ENST00000599322 NCF2P19878 526 aaPredicted RBP12.69□□□□□ -0.38
LIG1-218ENST00000599322 PPIBP23284 216 aaKnown RBP12.69□□□□□ -0.38
LIG1-218ENST00000599322 PSMA4P25789 261 aaKnown RBP12.69□□□□□ -0.38
LIG1-218ENST00000599322 RYKP34925 604 aa12.69□□□□□ -0.38
LIG1-218ENST00000599322 APOBEC1P41238 236 aaKnown RBP12.69□□□□□ -0.38
LIG1-218ENST00000599322 CDKN2CP42773 168 aa12.69□□□□□ -0.38
LIG1-218ENST00000599322 HTR3AP46098 478 aa12.69□□□□□ -0.38
LIG1-218ENST00000599322 CRISP3P54108 245 aa12.69□□□□□ -0.38
LIG1-218ENST00000599322 KRTAP10-9P60411 292 aa12.69□□□□□ -0.38
LIG1-218ENST00000599322 DSTNP60981 165 aa12.69□□□□□ -0.38
LIG1-218ENST00000599322 MERTKQ12866 999 aa12.69□□□□□ -0.38
LIG1-218ENST00000599322 SNTB1Q13884 538 aaKnown RBP12.69□□□□□ -0.38
LIG1-218ENST00000599322 NDUFAF6Q330K2 333 aa12.69□□□□□ -0.38
LIG1-218ENST00000599322 C3orf33Q6P1S2 294 aa12.69□□□□□ -0.38
LIG1-218ENST00000599322 FRRS1Q6ZNA5 592 aa12.69□□□□□ -0.38
LIG1-218ENST00000599322 CDH24Q86UP0 819 aa12.69□□□□□ -0.38
LIG1-218ENST00000599322 ZNF440Q8IYI8 595 aa12.69□□□□□ -0.38
LIG1-218ENST00000599322 SLC43A2Q8N370 569 aa12.69□□□□□ -0.38
LIG1-218ENST00000599322 OR6K3Q8NGY3 331 aa12.69□□□□□ -0.38
LIG1-218ENST00000599322 POC1BQ8TC44 478 aa12.69□□□□□ -0.38
LIG1-218ENST00000599322 ZFP90Q8TF47 636 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms