RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 SFTPDP35247 375 aa16.02■□□□□ 0.16
CHMP2A-203ENST00000597209 RNF144AP50876 292 aaPredicted RBP16.02■□□□□ 0.16
CHMP2A-203ENST00000597209 RIPPLY3P57055 190 aa16.02■□□□□ 0.16
CHMP2A-203ENST00000597209 TXNL4AP83876 142 aaKnown RBP16.02■□□□□ 0.16
CHMP2A-203ENST00000597209 SELENBP1Q13228 472 aa16.02■□□□□ 0.16
CHMP2A-203ENST00000597209 KEAP1Q14145 624 aa16.02■□□□□ 0.16
CHMP2A-203ENST00000597209 RNPS1Q15287 305 aaKnown RBP16.02■□□□□ 0.16
CHMP2A-203ENST00000597209 ZNF239Q16600 458 aaKnown RBP16.02■□□□□ 0.16
CHMP2A-203ENST00000597209 DEFB113Q30KQ7 82 aa16.02■□□□□ 0.16
CHMP2A-203ENST00000597209 NDUFAF6Q330K2 333 aa16.02■□□□□ 0.16
CHMP2A-203ENST00000597209 FAM174BQ3ZCQ3 159 aa16.02■□□□□ 0.16
CHMP2A-203ENST00000597209 ATG16L1Q676U5 607 aa16.02■□□□□ 0.16
CHMP2A-203ENST00000597209 BEND4Q6ZU67 534 aa16.02■□□□□ 0.16
CHMP2A-203ENST00000597209 TGIF2LYQ8IUE0 185 aa16.02■□□□□ 0.16
CHMP2A-203ENST00000597209 XAGE5Q8WWM1 108 aa16.02■□□□□ 0.16
CHMP2A-203ENST00000597209 ARL8AQ96BM9 186 aa16.02■□□□□ 0.16
CHMP2A-203ENST00000597209 TLCD1Q96CP7 247 aa16.02■□□□□ 0.16
CHMP2A-203ENST00000597209 REXO5Q96IC2 774 aaKnown RBP16.02■□□□□ 0.16
CHMP2A-203ENST00000597209 OR10A4Q9H209 315 aa16.02■□□□□ 0.16
CHMP2A-203ENST00000597209 MKLN1Q9UL63 735 aa16.02■□□□□ 0.16
CHMP2A-203ENST00000597209 GPR45Q9Y5Y3 372 aa16.02■□□□□ 0.16
CHMP2A-203ENST00000597209 AKAP6Q13023 2319 aa16.01■□□□□ 0.15
CHMP2A-203ENST00000597209 ABCA4P78363 2273 aa16.01■□□□□ 0.15
CHMP2A-203ENST00000597209 UQCRHLA0A096LP55 91 aa16.01■□□□□ 0.15
CHMP2A-203ENST00000597209 AGTR1P30556 359 aa16.01■□□□□ 0.15
CHMP2A-203ENST00000597209 KHKP50053 298 aa16.01■□□□□ 0.15
CHMP2A-203ENST00000597209 UFM1P61960 85 aa16.01■□□□□ 0.15
CHMP2A-203ENST00000597209 SKP2Q13309 424 aa16.01■□□□□ 0.15
CHMP2A-203ENST00000597209 QPRTQ15274 297 aa16.01■□□□□ 0.15
CHMP2A-203ENST00000597209 POU4F3Q15319 338 aa16.01■□□□□ 0.15
CHMP2A-203ENST00000597209 TMEM176BQ3YBM2 270 aaPredicted RBP16.01■□□□□ 0.15
CHMP2A-203ENST00000597209 TYW3Q6IPR3 259 aaKnown RBP16.01■□□□□ 0.15
CHMP2A-203ENST00000597209 EIF3MQ7L2H7 374 aaKnown RBP16.01■□□□□ 0.15
CHMP2A-203ENST00000597209 ZFP90Q8TF47 636 aa16.01■□□□□ 0.15
CHMP2A-203ENST00000597209 ST8SIA1Q92185 356 aa16.01■□□□□ 0.15
CHMP2A-203ENST00000597209 ZBTB9Q96C00 473 aa16.01■□□□□ 0.15
CHMP2A-203ENST00000597209 ZNF524Q96C55 264 aa16.01■□□□□ 0.15
CHMP2A-203ENST00000597209 MAELQ96JY0 434 aaKnown RBP16.01■□□□□ 0.15
CHMP2A-203ENST00000597209 MARK4Q96L34 752 aa16.01■□□□□ 0.15
CHMP2A-203ENST00000597209 TEX37Q96LM6 180 aa16.01■□□□□ 0.15
CHMP2A-203ENST00000597209 THUMPD3Q9BV44 507 aaKnown RBP16.01■□□□□ 0.15
CHMP2A-203ENST00000597209 SRXN1Q9BYN0 137 aa16.01■□□□□ 0.15
CHMP2A-203ENST00000597209 COQ10BQ9H8M1 238 aa16.01■□□□□ 0.15
CHMP2A-203ENST00000597209 TMBIM4Q9HC24 238 aa16.01■□□□□ 0.15
CHMP2A-203ENST00000597209 WDR45Q9Y484 360 aa16.01■□□□□ 0.15
CHMP2A-203ENST00000597209 PRRC2AP48634 2157 aaKnown RBP16.01■□□□□ 0.15
CHMP2A-203ENST00000597209 SIAH2O43255 324 aa16■□□□□ 0.15
CHMP2A-203ENST00000597209 CSTAP01040 98 aa16■□□□□ 0.15
CHMP2A-203ENST00000597209 CD99P14209 185 aa16■□□□□ 0.15
CHMP2A-203ENST00000597209 CD53P19397 219 aa16■□□□□ 0.15
CHMP2A-203ENST00000597209 PGCP20142 388 aa16■□□□□ 0.15
CHMP2A-203ENST00000597209 EPHA3P29320 983 aa16■□□□□ 0.15
CHMP2A-203ENST00000597209 IL12AP29459 219 aa16■□□□□ 0.15
CHMP2A-203ENST00000597209 CHI3L1P36222 383 aaPredicted RBP16■□□□□ 0.15
CHMP2A-203ENST00000597209 PGM1P36871 562 aa16■□□□□ 0.15
CHMP2A-203ENST00000597209 RAC3P60763 192 aa16■□□□□ 0.15
CHMP2A-203ENST00000597209 MAGOHP61326 146 aaKnown RBP16■□□□□ 0.15
CHMP2A-203ENST00000597209 FUT5Q11128 374 aa16■□□□□ 0.15
CHMP2A-203ENST00000597209 BEND6Q5SZJ8 279 aaPredicted RBP16■□□□□ 0.15
CHMP2A-203ENST00000597209 TNFAIP8L2Q6P589 184 aaPredicted RBP16■□□□□ 0.15
CHMP2A-203ENST00000597209 STK32CQ86UX6 486 aa16■□□□□ 0.15
CHMP2A-203ENST00000597209 SLC43A2Q8N370 569 aa16■□□□□ 0.15
CHMP2A-203ENST00000597209 TMCO5AQ8N6Q1 288 aa16■□□□□ 0.15
CHMP2A-203ENST00000597209 TRIML2Q8N7C3 387 aa16■□□□□ 0.15
CHMP2A-203ENST00000597209 GLB1L3Q8NCI6 653 aaPredicted RBP16■□□□□ 0.15
CHMP2A-203ENST00000597209 FAM71CQ8NEG0 241 aa16■□□□□ 0.15
CHMP2A-203ENST00000597209 RFWD2Q8NHY2 731 aa16■□□□□ 0.15
CHMP2A-203ENST00000597209 TMEM234Q8WY98 164 aa16■□□□□ 0.15
CHMP2A-203ENST00000597209 ROBO4Q8WZ75 1007 aa16■□□□□ 0.15
CHMP2A-203ENST00000597209 RAB8BQ92930 207 aa16■□□□□ 0.15
CHMP2A-203ENST00000597209 ROPN1LQ96C74 230 aa16■□□□□ 0.15
CHMP2A-203ENST00000597209 SLC35A5Q9BS91 424 aa16■□□□□ 0.15
CHMP2A-203ENST00000597209 KLHL4Q9C0H6 718 aa16■□□□□ 0.15
CHMP2A-203ENST00000597209 MANSC1Q9H8J5 431 aa16■□□□□ 0.15
CHMP2A-203ENST00000597209 BEX4Q9NWD9 120 aaPredicted RBP16■□□□□ 0.15
CHMP2A-203ENST00000597209 NKIRAS1Q9NYS0 192 aa16■□□□□ 0.15
CHMP2A-203ENST00000597209 C6orf203Q9P0P8 240 aaPredicted RBP16■□□□□ 0.15
CHMP2A-203ENST00000597209 MARCOQ9UEW3 520 aaPredicted RBP16■□□□□ 0.15
CHMP2A-203ENST00000597209 SLC35A3Q9Y2D2 325 aa16■□□□□ 0.15
CHMP2A-203ENST00000597209 GPR52Q9Y2T5 361 aa16■□□□□ 0.15
CHMP2A-203ENST00000597209 ITPR3Q14573 2671 aa15.99■□□□□ 0.15
CHMP2A-203ENST00000597209 CENPVL1A0A0U1RR11 272 aa15.99■□□□□ 0.15
CHMP2A-203ENST00000597209 PRKD3O94806 890 aa15.99■□□□□ 0.15
CHMP2A-203ENST00000597209 PGRP06401 933 aa15.99■□□□□ 0.15
CHMP2A-203ENST00000597209 CCR4P51679 360 aa15.99■□□□□ 0.15
CHMP2A-203ENST00000597209 CASP9P55211 416 aa15.99■□□□□ 0.15
CHMP2A-203ENST00000597209 MAPK14Q16539 360 aa15.99■□□□□ 0.15
CHMP2A-203ENST00000597209 EXOC3L2Q2M3D2 409 aa15.99■□□□□ 0.15
CHMP2A-203ENST00000597209 C3orf33Q6P1S2 294 aa15.99■□□□□ 0.15
CHMP2A-203ENST00000597209 STAC2Q6ZMT1 411 aa15.99■□□□□ 0.15
CHMP2A-203ENST00000597209 FRRS1Q6ZNA5 592 aa15.99■□□□□ 0.15
CHMP2A-203ENST00000597209 FCRLAQ7L513 359 aa15.99■□□□□ 0.15
CHMP2A-203ENST00000597209 OLIG3Q7RTU3 272 aa15.99■□□□□ 0.15
CHMP2A-203ENST00000597209 ZNF550Q7Z398 422 aa15.99■□□□□ 0.15
CHMP2A-203ENST00000597209 ZNF619Q8N2I2 560 aa15.99■□□□□ 0.15
CHMP2A-203ENST00000597209 MGARPQ8TDB4 240 aa15.99■□□□□ 0.15
CHMP2A-203ENST00000597209 PANX1Q96RD7 426 aa15.99■□□□□ 0.15
CHMP2A-203ENST00000597209 TACO1Q9BSH4 297 aaKnown RBP15.99■□□□□ 0.15
CHMP2A-203ENST00000597209 WDR55Q9H6Y2 383 aaPredicted RBP15.99■□□□□ 0.15
CHMP2A-203ENST00000597209 ACER3Q9NUN7 267 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms