RNA–Protein interactions for RNA: ENST00000597172.5

TRIM28-208, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-208ENST00000597172 KRT36O76013 467 aa8.6□□□□□ -1.03
TRIM28-208ENST00000597172 WDPCPO95876 746 aa8.6□□□□□ -1.03
TRIM28-208ENST00000597172 F10P00742 488 aa8.6□□□□□ -1.03
TRIM28-208ENST00000597172 GPIP06744 558 aa8.6□□□□□ -1.03
TRIM28-208ENST00000597172 CCL3P10147 92 aa8.6□□□□□ -1.03
TRIM28-208ENST00000597172 EVI2BP34910 448 aa8.6□□□□□ -1.03
TRIM28-208ENST00000597172 CASP3P42574 277 aa8.6□□□□□ -1.03
TRIM28-208ENST00000597172 VLDLRP98155 873 aa8.6□□□□□ -1.03
TRIM28-208ENST00000597172 TUBA3CQ13748 450 aa8.6□□□□□ -1.03
TRIM28-208ENST00000597172 LARS2Q15031 903 aaKnown RBP8.6□□□□□ -1.03
TRIM28-208ENST00000597172 NPTX1Q15818 432 aa8.6□□□□□ -1.03
TRIM28-208ENST00000597172 NRF1Q16656 503 aa8.6□□□□□ -1.03
TRIM28-208ENST00000597172 LIN52Q52LA3 116 aa8.6□□□□□ -1.03
TRIM28-208ENST00000597172 MRPL2Q5T653 305 aaKnown RBP8.6□□□□□ -1.03
TRIM28-208ENST00000597172 ABHD17BQ5VST6 288 aa8.6□□□□□ -1.03
TRIM28-208ENST00000597172 RNF220Q5VTB9 566 aa8.6□□□□□ -1.03
TRIM28-208ENST00000597172 AGAP7PQ5VUJ5 663 aa8.6□□□□□ -1.03
TRIM28-208ENST00000597172 TMEM81Q6P7N7 255 aa8.6□□□□□ -1.03
TRIM28-208ENST00000597172 TUBA3EQ6PEY2 450 aa8.6□□□□□ -1.03
TRIM28-208ENST00000597172 IGFL2Q6UWQ7 119 aa8.6□□□□□ -1.03
TRIM28-208ENST00000597172 ISLR2Q6UXK2 745 aa8.6□□□□□ -1.03
TRIM28-208ENST00000597172 FKBP9P1Q75LS8 142 aa8.6□□□□□ -1.03
TRIM28-208ENST00000597172 MDGA2Q7Z553 956 aa8.6□□□□□ -1.03
TRIM28-208ENST00000597172 GRAMD2AQ8IUY3 354 aa8.6□□□□□ -1.03
TRIM28-208ENST00000597172 DND1Q8IYX4 353 aaKnown RBP8.6□□□□□ -1.03
TRIM28-208ENST00000597172 GATSQ8NAP1 163 aa8.6□□□□□ -1.03
TRIM28-208ENST00000597172 FAM71CQ8NEG0 241 aa8.6□□□□□ -1.03
TRIM28-208ENST00000597172 PAQR8Q8TEZ7 354 aa8.6□□□□□ -1.03
TRIM28-208ENST00000597172 OIT3Q8WWZ8 545 aa8.6□□□□□ -1.03
TRIM28-208ENST00000597172 LZICQ8WZA0 190 aa8.6□□□□□ -1.03
TRIM28-208ENST00000597172 POP5Q969H6 163 aaKnown RBP8.6□□□□□ -1.03
TRIM28-208ENST00000597172 SLC47A1Q96FL8 570 aa8.6□□□□□ -1.03
TRIM28-208ENST00000597172 RSRC1Q96IZ7 334 aaKnown RBP8.6□□□□□ -1.03
TRIM28-208ENST00000597172 AGAP4Q96P64 663 aa8.6□□□□□ -1.03
TRIM28-208ENST00000597172 SIGLEC12Q96PQ1 595 aa8.6□□□□□ -1.03
TRIM28-208ENST00000597172 SMAD5Q99717 465 aaKnown RBP8.6□□□□□ -1.03
TRIM28-208ENST00000597172 FOXC2Q99958 501 aa8.6□□□□□ -1.03
TRIM28-208ENST00000597172 KLHDC3Q9BQ90 382 aa8.6□□□□□ -1.03
TRIM28-208ENST00000597172 PRR14Q9BWN1 585 aa8.6□□□□□ -1.03
TRIM28-208ENST00000597172 CHID1Q9BWS9 393 aa8.6□□□□□ -1.03
TRIM28-208ENST00000597172 UGT2B28Q9BY64 529 aa8.6□□□□□ -1.03
TRIM28-208ENST00000597172 MAGIXQ9H6Y5 334 aa8.6□□□□□ -1.03
TRIM28-208ENST00000597172 GALNT9Q9HCQ5 603 aa8.6□□□□□ -1.03
TRIM28-208ENST00000597172 S100A14Q9HCY8 104 aa8.6□□□□□ -1.03
TRIM28-208ENST00000597172 IL1RAPQ9NPH3 570 aa8.6□□□□□ -1.03
TRIM28-208ENST00000597172 ARMC1Q9NVT9 282 aa8.6□□□□□ -1.03
TRIM28-208ENST00000597172 HPF1Q9NWY4 346 aa8.6□□□□□ -1.03
TRIM28-208ENST00000597172 TEKT2Q9UIF3 430 aa8.6□□□□□ -1.03
TRIM28-208ENST00000597172 CNOT11Q9UKZ1 510 aaKnown RBP8.6□□□□□ -1.03
TRIM28-208ENST00000597172 BAG5Q9UL15 447 aa8.6□□□□□ -1.03
TRIM28-208ENST00000597172 SH3GLB1Q9Y371 365 aa8.6□□□□□ -1.03
TRIM28-208ENST00000597172 AP4S1Q9Y587 144 aa8.6□□□□□ -1.03
TRIM28-208ENST00000597172 HRH3Q9Y5N1 445 aa8.6□□□□□ -1.03
TRIM28-208ENST00000597172 PKD1L1Q8TDX9 2849 aa8.59□□□□□ -1.03
TRIM28-208ENST00000597172 M0R3H8 397 aa8.59□□□□□ -1.03
TRIM28-208ENST00000597172 SCDO00767 359 aa8.59□□□□□ -1.03
TRIM28-208ENST00000597172 CDK2AP1O14519 115 aa8.59□□□□□ -1.03
TRIM28-208ENST00000597172 TP53I11O14683 189 aa8.59□□□□□ -1.03
TRIM28-208ENST00000597172 MGRN1O60291 552 aa8.59□□□□□ -1.03
TRIM28-208ENST00000597172 FKBP6O75344 327 aa8.59□□□□□ -1.03
TRIM28-208ENST00000597172 NEURL1O76050 574 aa8.59□□□□□ -1.03
TRIM28-208ENST00000597172 ANGPTL1O95841 491 aa8.59□□□□□ -1.03
TRIM28-208ENST00000597172 MT-ND1P03886 318 aa8.59□□□□□ -1.03
TRIM28-208ENST00000597172 GKN3PP0CG01 181 aa8.59□□□□□ -1.03
TRIM28-208ENST00000597172 RAP2AP10114 183 aa8.59□□□□□ -1.03
TRIM28-208ENST00000597172 PRG2P13727 222 aa8.59□□□□□ -1.03
TRIM28-208ENST00000597172 EDN3P14138 238 aa8.59□□□□□ -1.03
TRIM28-208ENST00000597172 FUT4P22083 530 aa8.59□□□□□ -1.03
TRIM28-208ENST00000597172 PSMA4P25789 261 aaKnown RBP8.59□□□□□ -1.03
TRIM28-208ENST00000597172 ACAA2P42765 397 aaKnown RBP8.59□□□□□ -1.03
TRIM28-208ENST00000597172 MAGEA2P43356 314 aa8.59□□□□□ -1.03
TRIM28-208ENST00000597172 CYB561P49447 251 aa8.59□□□□□ -1.03
TRIM28-208ENST00000597172 TMED10P49755 219 aaKnown RBP8.59□□□□□ -1.03
TRIM28-208ENST00000597172 ZNF136P52737 540 aa8.59□□□□□ -1.03
TRIM28-208ENST00000597172 HOXC5Q00444 222 aa8.59□□□□□ -1.03
TRIM28-208ENST00000597172 CHRNB3Q05901 458 aa8.59□□□□□ -1.03
TRIM28-208ENST00000597172 MFAP5Q13361 173 aa8.59□□□□□ -1.03
TRIM28-208ENST00000597172 NDUFAF6Q330K2 333 aa8.59□□□□□ -1.03
TRIM28-208ENST00000597172 FAM98BQ52LJ0 330 aaKnown RBP8.59□□□□□ -1.03
TRIM28-208ENST00000597172 IFI44LQ53G44 452 aa8.59□□□□□ -1.03
TRIM28-208ENST00000597172 IRAK1BP1Q5VVH5 260 aa8.59□□□□□ -1.03
TRIM28-208ENST00000597172 SLC22A10Q63ZE4 541 aa8.59□□□□□ -1.03
TRIM28-208ENST00000597172 SPINK14Q6IE38 97 aa8.59□□□□□ -1.03
TRIM28-208ENST00000597172 AAGABQ6PD74 315 aa8.59□□□□□ -1.03
TRIM28-208ENST00000597172 CBLN3Q6UW01 205 aa8.59□□□□□ -1.03
TRIM28-208ENST00000597172 PIWIL3Q7Z3Z3 882 aaKnown RBP8.59□□□□□ -1.03
TRIM28-208ENST00000597172 TSPYL5Q86VY4 417 aaPredicted RBP8.59□□□□□ -1.03
TRIM28-208ENST00000597172 CARM1Q86X55 608 aa8.59□□□□□ -1.03
TRIM28-208ENST00000597172 GPALPP1Q8IXQ4 340 aa8.59□□□□□ -1.03
TRIM28-208ENST00000597172 CMIPQ8IY22 773 aa8.59□□□□□ -1.03
TRIM28-208ENST00000597172 LILRA2Q8N149 483 aa8.59□□□□□ -1.03
TRIM28-208ENST00000597172 ZNF614Q8N883 585 aa8.59□□□□□ -1.03
TRIM28-208ENST00000597172 ZNF527Q8NB42 609 aa8.59□□□□□ -1.03
TRIM28-208ENST00000597172 OR6T1Q8NGN1 323 aa8.59□□□□□ -1.03
TRIM28-208ENST00000597172 PHOSPHO1Q8TCT1 267 aa8.59□□□□□ -1.03
TRIM28-208ENST00000597172 DUSP19Q8WTR2 217 aa8.59□□□□□ -1.03
TRIM28-208ENST00000597172 PROX1Q92786 737 aa8.59□□□□□ -1.03
TRIM28-208ENST00000597172 HAS2Q92819 552 aa8.59□□□□□ -1.03
TRIM28-208ENST00000597172 ZNF524Q96C55 264 aa8.59□□□□□ -1.03
TRIM28-208ENST00000597172 ARSGQ96EG1 525 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms