RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 CDC40O60508 579 aaKnown RBP eCLIP9.55□□□□□ -0.88
LIG1-210ENST00000596332 TRAPPC6AO75865 159 aa9.55□□□□□ -0.88
LIG1-210ENST00000596332 FESP07332 822 aa9.55□□□□□ -0.88
LIG1-210ENST00000596332 PLA2G2AP14555 144 aa9.55□□□□□ -0.88
LIG1-210ENST00000596332 HPGDP15428 266 aa9.55□□□□□ -0.88
LIG1-210ENST00000596332 HK1P19367 917 aa9.55□□□□□ -0.88
LIG1-210ENST00000596332 TNFRSF1BP20333 461 aa9.55□□□□□ -0.88
LIG1-210ENST00000596332 GNLYP22749 145 aa9.55□□□□□ -0.88
LIG1-210ENST00000596332 SHC1P29353 583 aa9.55□□□□□ -0.88
LIG1-210ENST00000596332 MNAT1P51948 309 aa9.55□□□□□ -0.88
LIG1-210ENST00000596332 SUCLG1P53597 346 aaKnown RBP9.55□□□□□ -0.88
LIG1-210ENST00000596332 TPD52P55327 224 aaPredicted RBP9.55□□□□□ -0.88
LIG1-210ENST00000596332 SUMO3P55854 103 aaPredicted RBP9.55□□□□□ -0.88
LIG1-210ENST00000596332 CLDN18P56856 261 aa9.55□□□□□ -0.88
LIG1-210ENST00000596332 SESN3P58005 492 aa9.55□□□□□ -0.88
LIG1-210ENST00000596332 HPCAP84074 193 aa9.55□□□□□ -0.88
LIG1-210ENST00000596332 QPRTQ15274 297 aa9.55□□□□□ -0.88
LIG1-210ENST00000596332 CTU2Q2VPK5 515 aaKnown RBP9.55□□□□□ -0.88
LIG1-210ENST00000596332 LIN52Q52LA3 116 aa9.55□□□□□ -0.88
LIG1-210ENST00000596332 PRICKLE2Q7Z3G6 844 aa9.55□□□□□ -0.88
LIG1-210ENST00000596332 ADGRE4PQ86SQ3 457 aa9.55□□□□□ -0.88
LIG1-210ENST00000596332 PATL1Q86TB9 770 aaKnown RBP9.55□□□□□ -0.88
LIG1-210ENST00000596332 ADGRG3Q86Y34 549 aa9.55□□□□□ -0.88
LIG1-210ENST00000596332 DOLPP1Q86YN1 238 aa9.55□□□□□ -0.88
LIG1-210ENST00000596332 ARMC8Q8IUR7 673 aa9.55□□□□□ -0.88
LIG1-210ENST00000596332 FAM86B1Q8N7N1 296 aa9.55□□□□□ -0.88
LIG1-210ENST00000596332 GALNT11Q8NCW6 608 aa9.55□□□□□ -0.88
LIG1-210ENST00000596332 OR4K17Q8NGC6 315 aa9.55□□□□□ -0.88
LIG1-210ENST00000596332 SLC35B4Q969S0 331 aa9.55□□□□□ -0.88
LIG1-210ENST00000596332 WDYHV1Q96HA8 205 aa9.55□□□□□ -0.88
LIG1-210ENST00000596332 ADGRG7Q96K78 797 aa9.55□□□□□ -0.88
LIG1-210ENST00000596332 PINK1Q9BXM7 581 aa9.55□□□□□ -0.88
LIG1-210ENST00000596332 PRDM14Q9GZV8 571 aa9.55□□□□□ -0.88
LIG1-210ENST00000596332 GORASP2Q9H8Y8 452 aa9.55□□□□□ -0.88
LIG1-210ENST00000596332 ACER3Q9NUN7 267 aa9.55□□□□□ -0.88
LIG1-210ENST00000596332 ADA2Q9NZK5 511 aa9.55□□□□□ -0.88
LIG1-210ENST00000596332 EGFL7Q9UHF1 273 aa9.55□□□□□ -0.88
LIG1-210ENST00000596332 ANGPT4Q9Y264 503 aa9.55□□□□□ -0.88
LIG1-210ENST00000596332 VDAC3Q9Y277 283 aa9.55□□□□□ -0.88
LIG1-210ENST00000596332 RPH3AQ9Y2J0 694 aaPredicted RBP9.55□□□□□ -0.88
LIG1-210ENST00000596332 A0A087WZY1 265 aa9.54□□□□□ -0.88
LIG1-210ENST00000596332 H3BNH8 94 aa9.54□□□□□ -0.88
LIG1-210ENST00000596332 ACOT7O00154 380 aa9.54□□□□□ -0.88
LIG1-210ENST00000596332 SYT5O00445 386 aa9.54□□□□□ -0.88
LIG1-210ENST00000596332 ACOT8O14734 319 aa9.54□□□□□ -0.88
LIG1-210ENST00000596332 SEMG1P04279 462 aa9.54□□□□□ -0.88
LIG1-210ENST00000596332 C8BP07358 591 aa9.54□□□□□ -0.88
LIG1-210ENST00000596332 STSP08842 583 aa9.54□□□□□ -0.88
LIG1-210ENST00000596332 CPN1P15169 458 aa9.54□□□□□ -0.88
LIG1-210ENST00000596332 ZNF708P17019 499 aa9.54□□□□□ -0.88
LIG1-210ENST00000596332 TCEA1P23193 301 aaKnown RBP9.54□□□□□ -0.88
LIG1-210ENST00000596332 CHMP24386 653 aa9.54□□□□□ -0.88
LIG1-210ENST00000596332 CLDN20P56880 219 aa9.54□□□□□ -0.88
LIG1-210ENST00000596332 NCALDP61601 193 aa9.54□□□□□ -0.88
LIG1-210ENST00000596332 FOXF1Q12946 379 aa9.54□□□□□ -0.88
LIG1-210ENST00000596332 GANABQ14697 944 aaKnown RBP9.54□□□□□ -0.88
LIG1-210ENST00000596332 LARS2Q15031 903 aaKnown RBP9.54□□□□□ -0.88
LIG1-210ENST00000596332 C3AR1Q16581 482 aa9.54□□□□□ -0.88
LIG1-210ENST00000596332 SPATS1Q496A3 300 aa9.54□□□□□ -0.88
LIG1-210ENST00000596332 GXYLT1Q4G148 440 aa9.54□□□□□ -0.88
LIG1-210ENST00000596332 CYBRD1Q53TN4 286 aa9.54□□□□□ -0.88
LIG1-210ENST00000596332 SAMD4BQ5PRF9 694 aaKnown RBP9.54□□□□□ -0.88
LIG1-210ENST00000596332 GLYATQ6IB77 296 aa9.54□□□□□ -0.88
LIG1-210ENST00000596332 C16orf89Q6UX73 402 aa9.54□□□□□ -0.88
LIG1-210ENST00000596332 GFRALQ6UXV0 394 aa9.54□□□□□ -0.88
LIG1-210ENST00000596332 SEM1Q6ZVN7 128 aa9.54□□□□□ -0.88
LIG1-210ENST00000596332 CBLL1Q75N03 491 aa9.54□□□□□ -0.88
LIG1-210ENST00000596332 ASRGL1Q7L266 308 aa9.54□□□□□ -0.88
LIG1-210ENST00000596332 GGNQ86UU5 652 aa9.54□□□□□ -0.88
LIG1-210ENST00000596332 SLC30A8Q8IWU4 369 aa9.54□□□□□ -0.88
LIG1-210ENST00000596332 GHDCQ8N2G8 530 aa9.54□□□□□ -0.88
LIG1-210ENST00000596332 RPRMLQ8N4K4 120 aa9.54□□□□□ -0.88
LIG1-210ENST00000596332 LSMEM1Q8N8F7 131 aa9.54□□□□□ -0.88
LIG1-210ENST00000596332 OR52E4Q8NGH9 312 aa9.54□□□□□ -0.88
LIG1-210ENST00000596332 OR6T1Q8NGN1 323 aa9.54□□□□□ -0.88
LIG1-210ENST00000596332 UTP4Q969X6 686 aaKnown RBP9.54□□□□□ -0.88
LIG1-210ENST00000596332 RNF145Q96MT1 663 aa9.54□□□□□ -0.88
LIG1-210ENST00000596332 ZNF607Q96SK3 696 aa9.54□□□□□ -0.88
LIG1-210ENST00000596332 KCTD14Q9BQ13 255 aaPredicted RBP9.54□□□□□ -0.88
LIG1-210ENST00000596332 BTBD10Q9BSF8 475 aa9.54□□□□□ -0.88
LIG1-210ENST00000596332 PNPLA3Q9NST1 481 aa9.54□□□□□ -0.88
LIG1-210ENST00000596332 PRDM4Q9UKN5 801 aa9.54□□□□□ -0.88
LIG1-210ENST00000596332 ZNF232Q9UNY5 417 aa9.54□□□□□ -0.88
LIG1-210ENST00000596332 FAM215AQ9Y5M1 114 aa9.54□□□□□ -0.88
LIG1-210ENST00000596332 SNX13Q9Y5W8 968 aa9.54□□□□□ -0.88
LIG1-210ENST00000596332 TCRBV5S2A0A599 114 aa9.53□□□□□ -0.88
LIG1-210ENST00000596332 CLEC18AA5D8T8 446 aa9.53□□□□□ -0.88
LIG1-210ENST00000596332 TMEM247A6NEH6 219 aa9.53□□□□□ -0.88
LIG1-210ENST00000596332 CFAP73A6NFT4 308 aa9.53□□□□□ -0.88
LIG1-210ENST00000596332 NPIPA2E9PIF3 369 aa9.53□□□□□ -0.88
LIG1-210ENST00000596332 NPIPA3F8WFD2 350 aa9.53□□□□□ -0.88
LIG1-210ENST00000596332 M0R3H8 397 aa9.53□□□□□ -0.88
LIG1-210ENST00000596332 SLC19A2O60779 497 aa9.53□□□□□ -0.88
LIG1-210ENST00000596332 CYP7B1O75881 506 aa9.53□□□□□ -0.88
LIG1-210ENST00000596332 TCN1P20061 433 aaPredicted RBP9.53□□□□□ -0.88
LIG1-210ENST00000596332 ADH6P28332 368 aa9.53□□□□□ -0.88
LIG1-210ENST00000596332 RYKP34925 604 aa9.53□□□□□ -0.88
LIG1-210ENST00000596332 IDH2P48735 452 aaKnown RBP9.53□□□□□ -0.88
LIG1-210ENST00000596332 SELENOWP63302 87 aa9.53□□□□□ -0.88
LIG1-210ENST00000596332 ELOAQ14241 798 aaKnown RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms