RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 IDH3AP50213 366 aa11.7□□□□□ -0.54
USE1-207ENST00000596136 RNF144AP50876 292 aaPredicted RBP11.7□□□□□ -0.54
USE1-207ENST00000596136 ANXA11P50995 505 aaKnown RBP11.7□□□□□ -0.54
USE1-207ENST00000596136 POLR2JP52435 117 aaKnown RBP11.7□□□□□ -0.54
USE1-207ENST00000596136 PLAURQ03405 335 aa11.7□□□□□ -0.54
USE1-207ENST00000596136 SNTB1Q13884 538 aaKnown RBP11.7□□□□□ -0.54
USE1-207ENST00000596136 CBFBQ13951 182 aa11.7□□□□□ -0.54
USE1-207ENST00000596136 SGCBQ16585 318 aa11.7□□□□□ -0.54
USE1-207ENST00000596136 NDUFAF6Q330K2 333 aa11.7□□□□□ -0.54
USE1-207ENST00000596136 PDSS1Q5T2R2 415 aa11.7□□□□□ -0.54
USE1-207ENST00000596136 VWA1Q6PCB0 445 aa11.7□□□□□ -0.54
USE1-207ENST00000596136 LRRC74BQ6ZQY2 392 aa11.7□□□□□ -0.54
USE1-207ENST00000596136 FAM214BQ7L5A3 538 aa11.7□□□□□ -0.54
USE1-207ENST00000596136 ZZZ3Q8IYH5 903 aa11.7□□□□□ -0.54
USE1-207ENST00000596136 GOLGA6L1Q8N7Z2 621 aa11.7□□□□□ -0.54
USE1-207ENST00000596136 ZNF614Q8N883 585 aa11.7□□□□□ -0.54
USE1-207ENST00000596136 OR9I1Q8NGQ6 314 aa11.7□□□□□ -0.54
USE1-207ENST00000596136 CKAP2Q8WWK9 683 aa11.7□□□□□ -0.54
USE1-207ENST00000596136 ST8SIA1Q92185 356 aa11.7□□□□□ -0.54
USE1-207ENST00000596136 KLHL15Q96M94 604 aa11.7□□□□□ -0.54
USE1-207ENST00000596136 SLC38A1Q9H2H9 487 aa11.7□□□□□ -0.54
USE1-207ENST00000596136 TCF7L2Q9NQB0 619 aa11.7□□□□□ -0.54
USE1-207ENST00000596136 GLRX2Q9NS18 164 aa11.7□□□□□ -0.54
USE1-207ENST00000596136 INTS9Q9NV88 658 aaKnown RBP11.7□□□□□ -0.54
USE1-207ENST00000596136 TMEM45AQ9NWC5 275 aa11.7□□□□□ -0.54
USE1-207ENST00000596136 GALNT8Q9NY28 637 aa11.7□□□□□ -0.54
USE1-207ENST00000596136 SLC35A3Q9Y2D2 325 aa11.7□□□□□ -0.54
USE1-207ENST00000596136 TUBAL3A6NHL2 446 aa11.69□□□□□ -0.54
USE1-207ENST00000596136 TNFSF11O14788 317 aa11.69□□□□□ -0.54
USE1-207ENST00000596136 CXCL13O43927 109 aa11.69□□□□□ -0.54
USE1-207ENST00000596136 SASH3O75995 380 aa11.69□□□□□ -0.54
USE1-207ENST00000596136 GOSR1O95249 250 aa11.69□□□□□ -0.54
USE1-207ENST00000596136 H6PDO95479 791 aa11.69□□□□□ -0.54
USE1-207ENST00000596136 NUDT14O95848 222 aa11.69□□□□□ -0.54
USE1-207ENST00000596136 OPN1LWP04000 364 aa11.69□□□□□ -0.54
USE1-207ENST00000596136 CHRM4P08173 479 aa11.69□□□□□ -0.54
USE1-207ENST00000596136 RPS4Y1P22090 263 aaKnown RBP11.69□□□□□ -0.54
USE1-207ENST00000596136 SHC1P29353 583 aa11.69□□□□□ -0.54
USE1-207ENST00000596136 CARD18P57730 90 aa11.69□□□□□ -0.54
USE1-207ENST00000596136 IRX1P78414 480 aaPredicted RBP11.69□□□□□ -0.54
USE1-207ENST00000596136 KCNJ10P78508 379 aa11.69□□□□□ -0.54
USE1-207ENST00000596136 CHRNEQ04844 493 aa11.69□□□□□ -0.54
USE1-207ENST00000596136 QPRTQ15274 297 aa11.69□□□□□ -0.54
USE1-207ENST00000596136 MAPK11Q15759 364 aa11.69□□□□□ -0.54
USE1-207ENST00000596136 SYPL1Q16563 259 aa11.69□□□□□ -0.54
USE1-207ENST00000596136 COX20Q5RI15 118 aa11.69□□□□□ -0.54
USE1-207ENST00000596136 HBMQ6B0K9 141 aa11.69□□□□□ -0.54
USE1-207ENST00000596136 ZNF474Q6S9Z5 364 aaPredicted RBP11.69□□□□□ -0.54
USE1-207ENST00000596136 LUZP2Q86TE4 346 aa11.69□□□□□ -0.54
USE1-207ENST00000596136 ANKFN1Q8N957 763 aa11.69□□□□□ -0.54
USE1-207ENST00000596136 GTF2H4Q92759 462 aa11.69□□□□□ -0.54
USE1-207ENST00000596136 OSTF1Q92882 214 aa11.69□□□□□ -0.54
USE1-207ENST00000596136 GMPPAQ96IJ6 420 aaPredicted RBP11.69□□□□□ -0.54
USE1-207ENST00000596136 ITCHQ96J02 903 aa11.69□□□□□ -0.54
USE1-207ENST00000596136 MAGEB18Q96M61 343 aa11.69□□□□□ -0.54
USE1-207ENST00000596136 DACH2Q96NX9 599 aa11.69□□□□□ -0.54
USE1-207ENST00000596136 EBF4Q9BQW3 602 aa11.69□□□□□ -0.54
USE1-207ENST00000596136 THUMPD3Q9BV44 507 aaKnown RBP11.69□□□□□ -0.54
USE1-207ENST00000596136 RMND5AQ9H871 391 aa11.69□□□□□ -0.54
USE1-207ENST00000596136 MTHFD2LQ9H903 347 aaPredicted RBP11.69□□□□□ -0.54
USE1-207ENST00000596136 SLC52A3Q9NQ40 469 aa11.69□□□□□ -0.54
USE1-207ENST00000596136 EXOSC3Q9NQT5 275 aaKnown RBP11.69□□□□□ -0.54
USE1-207ENST00000596136 PLSCR4Q9NRQ2 329 aa11.69□□□□□ -0.54
USE1-207ENST00000596136 RASSF1Q9NS23 344 aa11.69□□□□□ -0.54
USE1-207ENST00000596136 ACER3Q9NUN7 267 aa11.69□□□□□ -0.54
USE1-207ENST00000596136 MCTS1Q9ULC4 181 aaKnown RBP11.69□□□□□ -0.54
USE1-207ENST00000596136 AGAP5A6NIR3 686 aa11.68□□□□□ -0.54
USE1-207ENST00000596136 GJE1A6NN92 205 aa11.68□□□□□ -0.54
USE1-207ENST00000596136 A6NNC1 897 aa11.68□□□□□ -0.54
USE1-207ENST00000596136 POLR3GO15318 223 aaPredicted RBP11.68□□□□□ -0.54
USE1-207ENST00000596136 SS18L1O75177 396 aaPredicted RBP11.68□□□□□ -0.54
USE1-207ENST00000596136 BCAS1O75363 584 aaPredicted RBP11.68□□□□□ -0.54
USE1-207ENST00000596136 UBTFL6P0CB48 400 aaPredicted RBP11.68□□□□□ -0.54
USE1-207ENST00000596136 HOXB9P17482 250 aaPredicted RBP11.68□□□□□ -0.54
USE1-207ENST00000596136 PGCP20142 388 aa11.68□□□□□ -0.54
USE1-207ENST00000596136 CPA2P48052 419 aa11.68□□□□□ -0.54
USE1-207ENST00000596136 ATP4BP51164 291 aa11.68□□□□□ -0.54
USE1-207ENST00000596136 AQP5P55064 265 aa11.68□□□□□ -0.54
USE1-207ENST00000596136 SESN3P58005 492 aa11.68□□□□□ -0.54
USE1-207ENST00000596136 SELENBP1Q13228 472 aa11.68□□□□□ -0.54
USE1-207ENST00000596136 TIGD2Q4W5G0 525 aa11.68□□□□□ -0.54
USE1-207ENST00000596136 GPAT3Q53EU6 434 aa11.68□□□□□ -0.54
USE1-207ENST00000596136 BLOC1S3Q6QNY0 202 aa11.68□□□□□ -0.54
USE1-207ENST00000596136 FUNDC1Q8IVP5 155 aa11.68□□□□□ -0.54
USE1-207ENST00000596136 CMIPQ8IY22 773 aa11.68□□□□□ -0.54
USE1-207ENST00000596136 CNEP1R1Q8N9A8 125 aa11.68□□□□□ -0.54
USE1-207ENST00000596136 LINC01560Q8TB33 94 aa11.68□□□□□ -0.54
USE1-207ENST00000596136 DYDC1Q8WWB3 177 aa11.68□□□□□ -0.54
USE1-207ENST00000596136 VPS33AQ96AX1 596 aa11.68□□□□□ -0.54
USE1-207ENST00000596136 PAIP1Q9H074 479 aaKnown RBP11.68□□□□□ -0.54
USE1-207ENST00000596136 TMEM185BQ9H7F4 350 aa11.68□□□□□ -0.54
USE1-207ENST00000596136 COQ10BQ9H8M1 238 aa11.68□□□□□ -0.54
USE1-207ENST00000596136 TPT1P8Q9HAU6 139 aa11.68□□□□□ -0.54
USE1-207ENST00000596136 GP6Q9HCN6 339 aa11.68□□□□□ -0.54
USE1-207ENST00000596136 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.68□□□□□ -0.54
USE1-207ENST00000596136 ELOVL5Q9NYP7 299 aa11.68□□□□□ -0.54
USE1-207ENST00000596136 PRDM4Q9UKN5 801 aa11.68□□□□□ -0.54
USE1-207ENST00000596136 GMEB1Q9Y692 573 aa11.68□□□□□ -0.54
USE1-207ENST00000596136 CELSR1Q9NYQ6 3014 aa11.68□□□□□ -0.54
USE1-207ENST00000596136 DSPPQ9NZW4 1301 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms