RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 CLEC2AQ6UVW9 174 aa8.8□□□□□ -1
LIG1-209ENST00000596104 LRIG3Q6UXM1 1119 aa8.8□□□□□ -1
LIG1-209ENST00000596104 Q6ZSR9 355 aa8.8□□□□□ -1
LIG1-209ENST00000596104 SSX8Q7RTT4 187 aa8.8□□□□□ -1
LIG1-209ENST00000596104 P2RY8Q86VZ1 359 aa8.8□□□□□ -1
LIG1-209ENST00000596104 NOA1Q8NC60 698 aaKnown RBP8.8□□□□□ -1
LIG1-209ENST00000596104 ATP6V1C2Q8NEY4 427 aa8.8□□□□□ -1
LIG1-209ENST00000596104 OR2T11Q8NH01 316 aa8.8□□□□□ -1
LIG1-209ENST00000596104 GPR119Q8TDV5 335 aa8.8□□□□□ -1
LIG1-209ENST00000596104 IFT81Q8WYA0 676 aa8.8□□□□□ -1
LIG1-209ENST00000596104 JADE3Q92613 823 aa8.8□□□□□ -1
LIG1-209ENST00000596104 CDS1Q92903 461 aa8.8□□□□□ -1
LIG1-209ENST00000596104 CCDC126Q96EE4 140 aa8.8□□□□□ -1
LIG1-209ENST00000596104 RADILQ96JH8 1075 aa8.8□□□□□ -1
LIG1-209ENST00000596104 MRGPRX4Q96LA9 322 aa8.8□□□□□ -1
LIG1-209ENST00000596104 ADAD1Q96M93 576 aaKnown RBP8.8□□□□□ -1
LIG1-209ENST00000596104 TSSK3Q96PN8 268 aa8.8□□□□□ -1
LIG1-209ENST00000596104 ZNF300Q96RE9 604 aaPredicted RBP8.8□□□□□ -1
LIG1-209ENST00000596104 STACQ99469 402 aa8.8□□□□□ -1
LIG1-209ENST00000596104 PIGUQ9H490 435 aa8.8□□□□□ -1
LIG1-209ENST00000596104 C1orf109Q9NX04 203 aa8.8□□□□□ -1
LIG1-209ENST00000596104 SH3BP4Q9P0V3 963 aa8.8□□□□□ -1
LIG1-209ENST00000596104 CARD8Q9Y2G2 431 aa8.8□□□□□ -1
LIG1-209ENST00000596104 ZNF724A8MTY0 619 aa8.79□□□□□ -1
LIG1-209ENST00000596104 ESPNB1AK53 854 aa8.79□□□□□ -1
LIG1-209ENST00000596104 C9JVG2 144 aa8.79□□□□□ -1
LIG1-209ENST00000596104 SLC28A1O00337 649 aa8.79□□□□□ -1
LIG1-209ENST00000596104 CRCPO75575 148 aa8.79□□□□□ -1
LIG1-209ENST00000596104 H6PDO95479 791 aa8.79□□□□□ -1
LIG1-209ENST00000596104 NUDT14O95848 222 aa8.79□□□□□ -1
LIG1-209ENST00000596104 PROCP04070 461 aa8.79□□□□□ -1
LIG1-209ENST00000596104 MYL2P10916 166 aa8.79□□□□□ -1
LIG1-209ENST00000596104 SLC25A16P16260 332 aa8.79□□□□□ -1
LIG1-209ENST00000596104 GGT1P19440 569 aa8.79□□□□□ -1
LIG1-209ENST00000596104 SLC7A1P30825 629 aa8.79□□□□□ -1
LIG1-209ENST00000596104 THBS2P35442 1172 aa8.79□□□□□ -1
LIG1-209ENST00000596104 ATP12AP54707 1039 aa8.79□□□□□ -1
LIG1-209ENST00000596104 CASP9P55211 416 aa8.79□□□□□ -1
LIG1-209ENST00000596104 DNAJB13P59910 316 aa8.79□□□□□ -1
LIG1-209ENST00000596104 NAA20P61599 178 aa8.79□□□□□ -1
LIG1-209ENST00000596104 SPOCK1Q08629 439 aa8.79□□□□□ -1
LIG1-209ENST00000596104 RASGEF1BQ0VAM2 473 aa8.79□□□□□ -1
LIG1-209ENST00000596104 MLC1Q15049 377 aa8.79□□□□□ -1
LIG1-209ENST00000596104 RFTN2Q52LD8 501 aaPredicted RBP8.79□□□□□ -1
LIG1-209ENST00000596104 CLEC6AQ6EIG7 209 aa8.79□□□□□ -1
LIG1-209ENST00000596104 CDC73Q6P1J9 531 aa8.79□□□□□ -1
LIG1-209ENST00000596104 B3GLCTQ6Y288 498 aa8.79□□□□□ -1
LIG1-209ENST00000596104 RNF165Q6ZSG1 346 aa8.79□□□□□ -1
LIG1-209ENST00000596104 ZNF525Q8N782 197 aa8.79□□□□□ -1
LIG1-209ENST00000596104 ZNF433Q8N7K0 673 aaPredicted RBP8.79□□□□□ -1
LIG1-209ENST00000596104 CLHC1Q8NHS4 586 aa8.79□□□□□ -1
LIG1-209ENST00000596104 HTRA1Q92743 480 aa8.79□□□□□ -1
LIG1-209ENST00000596104 ZNF775Q96BV0 537 aaPredicted RBP8.79□□□□□ -1
LIG1-209ENST00000596104 MUCL1Q96DR8 90 aa8.79□□□□□ -1
LIG1-209ENST00000596104 KCNK17Q96T54 332 aa8.79□□□□□ -1
LIG1-209ENST00000596104 DHRS9Q9BPW9 319 aa8.79□□□□□ -1
LIG1-209ENST00000596104 BEX2Q9BXY8 128 aa8.79□□□□□ -1
LIG1-209ENST00000596104 TUBB1Q9H4B7 451 aa8.79□□□□□ -1
LIG1-209ENST00000596104 ANKZF1Q9H8Y5 726 aa8.79□□□□□ -1
LIG1-209ENST00000596104 CBLN4Q9NTU7 201 aa8.79□□□□□ -1
LIG1-209ENST00000596104 ZCCHC3Q9NUD5 404 aaKnown RBP8.79□□□□□ -1
LIG1-209ENST00000596104 LPAR3Q9UBY5 353 aa8.79□□□□□ -1
LIG1-209ENST00000596104 DCDC2Q9UHG0 476 aa8.79□□□□□ -1
LIG1-209ENST00000596104 BAIAP2L1Q9UHR4 511 aa8.79□□□□□ -1
LIG1-209ENST00000596104 SLC25A15Q9Y619 301 aa8.79□□□□□ -1
LIG1-209ENST00000596104 KCNE3Q9Y6H6 103 aa8.79□□□□□ -1
LIG1-209ENST00000596104 ALPK2Q86TB3 2170 aa8.79□□□□□ -1
LIG1-209ENST00000596104 FREM1Q5H8C1 2179 aa8.78□□□□□ -1
LIG1-209ENST00000596104 H3BNH8 94 aa8.78□□□□□ -1
LIG1-209ENST00000596104 H7C417 338 aa8.78□□□□□ -1
LIG1-209ENST00000596104 LSM1O15116 133 aaKnown RBP8.78□□□□□ -1
LIG1-209ENST00000596104 RIPK2O43353 540 aa8.78□□□□□ -1
LIG1-209ENST00000596104 DNAJA2O60884 412 aa8.78□□□□□ -1
LIG1-209ENST00000596104 IGHV4-31P0DP07 118 aa8.78□□□□□ -1
LIG1-209ENST00000596104 ATP6V1C1P21283 382 aa8.78□□□□□ -1
LIG1-209ENST00000596104 PTAFRP25105 342 aa8.78□□□□□ -1
LIG1-209ENST00000596104 CD40P25942 277 aa8.78□□□□□ -1
LIG1-209ENST00000596104 QPRTQ15274 297 aa8.78□□□□□ -1
LIG1-209ENST00000596104 ARL13AQ5H913 290 aaPredicted RBP8.78□□□□□ -1
LIG1-209ENST00000596104 DCST2Q5T1A1 773 aa8.78□□□□□ -1
LIG1-209ENST00000596104 ABLIM2Q6H8Q1 611 aa8.78□□□□□ -1
LIG1-209ENST00000596104 TMEM108Q6UXF1 575 aa8.78□□□□□ -1
LIG1-209ENST00000596104 GALNT5Q7Z7M9 940 aa8.78□□□□□ -1
LIG1-209ENST00000596104 PIAS4Q8N2W9 510 aaPredicted RBP8.78□□□□□ -1
LIG1-209ENST00000596104 MUC15Q8N387 334 aa8.78□□□□□ -1
LIG1-209ENST00000596104 ZNF527Q8NB42 609 aa8.78□□□□□ -1
LIG1-209ENST00000596104 OR5W2Q8NH69 310 aa8.78□□□□□ -1
LIG1-209ENST00000596104 OR2W6PQ8NHA6 318 aa8.78□□□□□ -1
LIG1-209ENST00000596104 PSMA8Q8TAA3 256 aa8.78□□□□□ -1
LIG1-209ENST00000596104 C10orf105Q8TEF2 133 aa8.78□□□□□ -1
LIG1-209ENST00000596104 MTERF3Q96E29 417 aa8.78□□□□□ -1
LIG1-209ENST00000596104 C19orf24Q9BVV8 132 aa8.78□□□□□ -1
LIG1-209ENST00000596104 HOXD1Q9GZZ0 328 aa8.78□□□□□ -1
LIG1-209ENST00000596104 MANSC1Q9H8J5 431 aa8.78□□□□□ -1
LIG1-209ENST00000596104 GPATCH2Q9NW75 528 aa8.78□□□□□ -1
LIG1-209ENST00000596104 ATP6V1HQ9UI12 483 aa8.78□□□□□ -1
LIG1-209ENST00000596104 MGAT4BQ9UQ53 548 aa8.78□□□□□ -1
LIG1-209ENST00000596104 IGKV3D-15A0A087WSY6 115 aa8.77□□□□□ -1.01
LIG1-209ENST00000596104 A0A1W2PPM1 405 aa8.77□□□□□ -1.01
LIG1-209ENST00000596104 GTPBP1O00178 669 aaKnown RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms