RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 C1orf50Q9BV19 199 aa16.79■□□□□ 0.28
CCDC43-205ENST00000592333 TMEM109Q9BVC6 243 aa16.79■□□□□ 0.28
CCDC43-205ENST00000592333 SRXN1Q9BYN0 137 aa16.79■□□□□ 0.28
CCDC43-205ENST00000592333 ESRP2Q9H6T0 727 aaKnown RBP16.79■□□□□ 0.28
CCDC43-205ENST00000592333 ANKZF1Q9H8Y5 726 aa16.79■□□□□ 0.28
CCDC43-205ENST00000592333 RNASET2O00584 256 aaKnown RBP16.78■□□□□ 0.28
CCDC43-205ENST00000592333 CFLARO15519 480 aa16.78■□□□□ 0.28
CCDC43-205ENST00000592333 TYROBPO43914 113 aa16.78■□□□□ 0.28
CCDC43-205ENST00000592333 STX11O75558 287 aa16.78■□□□□ 0.28
CCDC43-205ENST00000592333 UBL4AP11441 157 aa16.78■□□□□ 0.28
CCDC43-205ENST00000592333 FKBP2P26885 142 aaKnown RBP16.78■□□□□ 0.28
CCDC43-205ENST00000592333 SLC7A1P30825 629 aa16.78■□□□□ 0.28
CCDC43-205ENST00000592333 ETV4P43268 484 aa16.78■□□□□ 0.28
CCDC43-205ENST00000592333 HBA1P69905 142 aa16.78■□□□□ 0.28
CCDC43-205ENST00000592333 ITGADQ13349 1161 aa16.78■□□□□ 0.28
CCDC43-205ENST00000592333 C3orf33Q6P1S2 294 aa16.78■□□□□ 0.28
CCDC43-205ENST00000592333 EMBQ6PCB8 327 aa16.78■□□□□ 0.28
CCDC43-205ENST00000592333 ZCCHC23Q6ZST2 131 aa16.78■□□□□ 0.28
CCDC43-205ENST00000592333 WFDC8Q8IUA0 241 aa16.78■□□□□ 0.28
CCDC43-205ENST00000592333 KRTCAP2Q8N6L1 136 aa16.78■□□□□ 0.28
CCDC43-205ENST00000592333 OR8J2Q8NGG1 315 aa16.78■□□□□ 0.28
CCDC43-205ENST00000592333 AGR3Q8TD06 166 aa16.78■□□□□ 0.28
CCDC43-205ENST00000592333 MIPOL1Q8TD10 442 aa16.78■□□□□ 0.28
CCDC43-205ENST00000592333 TMEM234Q8WY98 164 aa16.78■□□□□ 0.28
CCDC43-205ENST00000592333 S100PBPQ96BU1 408 aa16.78■□□□□ 0.28
CCDC43-205ENST00000592333 KLHDC3Q9BQ90 382 aa16.78■□□□□ 0.28
CCDC43-205ENST00000592333 LAT2Q9GZY6 243 aa16.78■□□□□ 0.28
CCDC43-205ENST00000592333 C12orf49Q9H741 205 aa16.78■□□□□ 0.28
CCDC43-205ENST00000592333 COQ10BQ9H8M1 238 aa16.78■□□□□ 0.28
CCDC43-205ENST00000592333 POLE3Q9NRF9 147 aa16.78■□□□□ 0.28
CCDC43-205ENST00000592333 GIMAP2Q9UG22 337 aa16.78■□□□□ 0.28
CCDC43-205ENST00000592333 KCNE3Q9Y6H6 103 aa16.78■□□□□ 0.28
CCDC43-205ENST00000592333 SERINC4A6NH21 518 aa16.77■□□□□ 0.28
CCDC43-205ENST00000592333 ZNF724A8MTY0 619 aa16.77■□□□□ 0.28
CCDC43-205ENST00000592333 ESPNB1AK53 854 aa16.77■□□□□ 0.28
CCDC43-205ENST00000592333 SPAG7O75391 227 aa16.77■□□□□ 0.28
CCDC43-205ENST00000592333 FESP07332 822 aa16.77■□□□□ 0.28
CCDC43-205ENST00000592333 G6PDP11413 515 aa16.77■□□□□ 0.28
CCDC43-205ENST00000592333 MATN1P21941 496 aa16.77■□□□□ 0.28
CCDC43-205ENST00000592333 IL32P24001 234 aa16.77■□□□□ 0.28
CCDC43-205ENST00000592333 SHC1P29353 583 aa16.77■□□□□ 0.28
CCDC43-205ENST00000592333 ARRB2P32121 409 aa16.77■□□□□ 0.28
CCDC43-205ENST00000592333 ARHGAP11BQ3KRB8 267 aa16.77■□□□□ 0.28
CCDC43-205ENST00000592333 NCMAPQ5T1S8 102 aa16.77■□□□□ 0.28
CCDC43-205ENST00000592333 Q6ZT83 130 aa16.77■□□□□ 0.28
CCDC43-205ENST00000592333 CIARTQ8N365 385 aaPredicted RBP16.77■□□□□ 0.28
CCDC43-205ENST00000592333 SLC25A43Q8WUT9 341 aaPredicted RBP16.77■□□□□ 0.28
CCDC43-205ENST00000592333 KISS1RQ969F8 398 aaPredicted RBP16.77■□□□□ 0.28
CCDC43-205ENST00000592333 SERINC1Q9NRX5 453 aa16.77■□□□□ 0.28
CCDC43-205ENST00000592333 EXD2Q9NVH0 621 aa16.77■□□□□ 0.28
CCDC43-205ENST00000592333 PCDHGB4Q9UN71 923 aa16.77■□□□□ 0.28
CCDC43-205ENST00000592333 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.77■□□□□ 0.28
CCDC43-205ENST00000592333 RNF115Q9Y4L5 304 aa16.77■□□□□ 0.28
CCDC43-205ENST00000592333 ROS1P08922 2347 aa16.77■□□□□ 0.28
CCDC43-205ENST00000592333 HEATR5AQ86XA9 2040 aa16.77■□□□□ 0.27
CCDC43-205ENST00000592333 OIP5O43482 229 aa16.76■□□□□ 0.27
CCDC43-205ENST00000592333 SKAP2O75563 359 aaPredicted RBP16.76■□□□□ 0.27
CCDC43-205ENST00000592333 OR3A2P47893 321 aa16.76■□□□□ 0.27
CCDC43-205ENST00000592333 ZNF844Q08AG5 666 aa16.76■□□□□ 0.27
CCDC43-205ENST00000592333 SKP2Q13309 424 aa16.76■□□□□ 0.27
CCDC43-205ENST00000592333 QPRTQ15274 297 aa16.76■□□□□ 0.27
CCDC43-205ENST00000592333 TOMM34Q15785 309 aaPredicted RBP16.76■□□□□ 0.27
CCDC43-205ENST00000592333 DPY19L1Q2PZI1 675 aa16.76■□□□□ 0.27
CCDC43-205ENST00000592333 EIF3MQ7L2H7 374 aaKnown RBP16.76■□□□□ 0.27
CCDC43-205ENST00000592333 NUFIP2Q7Z417 695 aaKnown RBP16.76■□□□□ 0.27
CCDC43-205ENST00000592333 C6orf120Q7Z4R8 191 aa16.76■□□□□ 0.27
CCDC43-205ENST00000592333 P2RY8Q86VZ1 359 aa16.76■□□□□ 0.27
CCDC43-205ENST00000592333 VPS37AQ8NEZ2 397 aa16.76■□□□□ 0.27
CCDC43-205ENST00000592333 NUDT8Q8WV74 236 aa16.76■□□□□ 0.27
CCDC43-205ENST00000592333 PSD2Q9BQI7 771 aa16.76■□□□□ 0.27
CCDC43-205ENST00000592333 POTEKPQ9BYX7 375 aa16.76■□□□□ 0.27
CCDC43-205ENST00000592333 ZNF350Q9GZX5 532 aa16.76■□□□□ 0.27
CCDC43-205ENST00000592333 SSU72Q9NP77 194 aaKnown RBP16.76■□□□□ 0.27
CCDC43-205ENST00000592333 NPIPA5A0A0B4J1W7 369 aa16.75■□□□□ 0.27
CCDC43-205ENST00000592333 NPIPA7E9PJI5 369 aa16.75■□□□□ 0.27
CCDC43-205ENST00000592333 BIRC5O15392 142 aa16.75■□□□□ 0.27
CCDC43-205ENST00000592333 CYTIPO60759 359 aa16.75■□□□□ 0.27
CCDC43-205ENST00000592333 CD3EP07766 207 aa16.75■□□□□ 0.27
CCDC43-205ENST00000592333 NPIPA8P0DM63 369 aa16.75■□□□□ 0.27
CCDC43-205ENST00000592333 PGCP20142 388 aa16.75■□□□□ 0.27
CCDC43-205ENST00000592333 ENPP1P22413 925 aa16.75■□□□□ 0.27
CCDC43-205ENST00000592333 RPS4XP62701 263 aaKnown RBP16.75■□□□□ 0.27
CCDC43-205ENST00000592333 CSNK2A1P68400 391 aaPredicted RBP16.75■□□□□ 0.27
CCDC43-205ENST00000592333 PDK3Q15120 406 aa16.75■□□□□ 0.27
CCDC43-205ENST00000592333 PDZK1Q5T2W1 519 aa16.75■□□□□ 0.27
CCDC43-205ENST00000592333 ANXA8L1Q5VT79 327 aa16.75■□□□□ 0.27
CCDC43-205ENST00000592333 HEPHL1Q6MZM0 1159 aa16.75■□□□□ 0.27
CCDC43-205ENST00000592333 Q71RC1 249 aaPredicted RBP16.75■□□□□ 0.27
CCDC43-205ENST00000592333 NUDCD3Q8IVD9 361 aa16.75■□□□□ 0.27
CCDC43-205ENST00000592333 TMCO5AQ8N6Q1 288 aa16.75■□□□□ 0.27
CCDC43-205ENST00000592333 ZNF614Q8N883 585 aa16.75■□□□□ 0.27
CCDC43-205ENST00000592333 OR5D16Q8NGK9 328 aa16.75■□□□□ 0.27
CCDC43-205ENST00000592333 AKAP1Q92667 903 aaKnown RBP eCLIP16.75■□□□□ 0.27
CCDC43-205ENST00000592333 FBXW5Q969U6 566 aa16.75■□□□□ 0.27
CCDC43-205ENST00000592333 TRMT61AQ96FX7 289 aaKnown RBP16.75■□□□□ 0.27
CCDC43-205ENST00000592333 GRIP2Q9C0E4 1043 aa16.75■□□□□ 0.27
CCDC43-205ENST00000592333 PRDM4Q9UKN5 801 aa16.75■□□□□ 0.27
CCDC43-205ENST00000592333 SLC35A3Q9Y2D2 325 aa16.75■□□□□ 0.27
CCDC43-205ENST00000592333 SPIN1Q9Y657 262 aaPredicted RBP16.75■□□□□ 0.27
CCDC43-205ENST00000592333 FN1P02751 2386 aaKnown RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms