RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 ZNF75CPQ92670 426 aaPredicted RBP9.29□□□□□ -0.92
VPS4B-207ENST00000591519 OSTF1Q92882 214 aa9.29□□□□□ -0.92
VPS4B-207ENST00000591519 FAM120BQ96EK7 910 aaKnown RBP9.29□□□□□ -0.92
VPS4B-207ENST00000591519 C16orf58Q96GQ5 468 aa9.29□□□□□ -0.92
VPS4B-207ENST00000591519 ZC3HAV1LQ96H79 300 aaKnown RBP9.29□□□□□ -0.92
VPS4B-207ENST00000591519 BTBD2Q9BX70 525 aa9.29□□□□□ -0.92
VPS4B-207ENST00000591519 HDHD5Q9BXW7 423 aa9.29□□□□□ -0.92
VPS4B-207ENST00000591519 HOXD1Q9GZZ0 328 aa9.29□□□□□ -0.92
VPS4B-207ENST00000591519 PIGUQ9H490 435 aa9.29□□□□□ -0.92
VPS4B-207ENST00000591519 AKTIPQ9H8T0 292 aa9.29□□□□□ -0.92
VPS4B-207ENST00000591519 VIPAS39Q9H9C1 493 aa9.29□□□□□ -0.92
VPS4B-207ENST00000591519 UBTD1Q9HAC8 227 aa9.29□□□□□ -0.92
VPS4B-207ENST00000591519 SIRT3Q9NTG7 399 aaPredicted RBP9.29□□□□□ -0.92
VPS4B-207ENST00000591519 ZNF701Q9NV72 531 aaPredicted RBP9.29□□□□□ -0.92
VPS4B-207ENST00000591519 THAP1Q9NVV9 213 aa9.29□□□□□ -0.92
VPS4B-207ENST00000591519 ZNF446Q9NWS9 450 aa9.29□□□□□ -0.92
VPS4B-207ENST00000591519 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.29□□□□□ -0.92
VPS4B-207ENST00000591519 FN1P02751 2386 aaKnown RBP9.29□□□□□ -0.92
VPS4B-207ENST00000591519 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.28□□□□□ -0.92
VPS4B-207ENST00000591519 H7C1Q1 480 aa9.28□□□□□ -0.92
VPS4B-207ENST00000591519 SCDO00767 359 aa9.28□□□□□ -0.92
VPS4B-207ENST00000591519 EFNA2O43921 213 aa9.28□□□□□ -0.92
VPS4B-207ENST00000591519 GMFGO60234 142 aa9.28□□□□□ -0.92
VPS4B-207ENST00000591519 SNNO75324 88 aaPredicted RBP9.28□□□□□ -0.92
VPS4B-207ENST00000591519 SYNGR4O95473 234 aa9.28□□□□□ -0.92
VPS4B-207ENST00000591519 PLGP00747 810 aaPredicted RBP9.28□□□□□ -0.92
VPS4B-207ENST00000591519 HMGN2P05204 90 aaKnown RBP9.28□□□□□ -0.92
VPS4B-207ENST00000591519 PABPC4LP0CB38 370 aaKnown RBP9.28□□□□□ -0.92
VPS4B-207ENST00000591519 ARAFP10398 606 aa9.28□□□□□ -0.92
VPS4B-207ENST00000591519 HPGDP15428 266 aa9.28□□□□□ -0.92
VPS4B-207ENST00000591519 CD33P20138 364 aa9.28□□□□□ -0.92
VPS4B-207ENST00000591519 RPL3P39023 403 aaKnown RBP9.28□□□□□ -0.92
VPS4B-207ENST00000591519 ZNF41P51814 821 aaPredicted RBP9.28□□□□□ -0.92
VPS4B-207ENST00000591519 SLC18A1P54219 525 aa9.28□□□□□ -0.92
VPS4B-207ENST00000591519 NR1H2P55055 460 aa9.28□□□□□ -0.92
VPS4B-207ENST00000591519 NME5P56597 212 aa9.28□□□□□ -0.92
VPS4B-207ENST00000591519 CD226Q15762 336 aa9.28□□□□□ -0.92
VPS4B-207ENST00000591519 EXOC3L2Q2M3D2 409 aa9.28□□□□□ -0.92
VPS4B-207ENST00000591519 KLHL26Q53HC5 615 aa9.28□□□□□ -0.92
VPS4B-207ENST00000591519 HBMQ6B0K9 141 aa9.28□□□□□ -0.92
VPS4B-207ENST00000591519 NXNQ6DKJ4 435 aa9.28□□□□□ -0.92
VPS4B-207ENST00000591519 ADAM5Q6NVV9 412 aa9.28□□□□□ -0.92
VPS4B-207ENST00000591519 SZRD1Q7Z422 152 aa9.28□□□□□ -0.92
VPS4B-207ENST00000591519 GALNT10Q86SR1 603 aa9.28□□□□□ -0.92
VPS4B-207ENST00000591519 STK32CQ86UX6 486 aa9.28□□□□□ -0.92
VPS4B-207ENST00000591519 LILRA2Q8N149 483 aa9.28□□□□□ -0.92
VPS4B-207ENST00000591519 ZNF611Q8N823 705 aa9.28□□□□□ -0.92
VPS4B-207ENST00000591519 OR7A2PQ8NGA2 310 aa9.28□□□□□ -0.92
VPS4B-207ENST00000591519 COQ8BQ96D53 544 aa9.28□□□□□ -0.92
VPS4B-207ENST00000591519 Q96MF0 132 aa9.28□□□□□ -0.92
VPS4B-207ENST00000591519 RNF145Q96MT1 663 aa9.28□□□□□ -0.92
VPS4B-207ENST00000591519 KLHDC3Q9BQ90 382 aa9.28□□□□□ -0.92
VPS4B-207ENST00000591519 GP6Q9HCN6 339 aa9.28□□□□□ -0.92
VPS4B-207ENST00000591519 ICAM5Q9UMF0 924 aa9.28□□□□□ -0.92
VPS4B-207ENST00000591519 CLEC4AQ9UMR7 237 aa9.28□□□□□ -0.92
VPS4B-207ENST00000591519 PRR14LQ5THK1 2151 aa9.28□□□□□ -0.92
VPS4B-207ENST00000591519 NUP214P35658 2090 aaPredicted RBP9.28□□□□□ -0.92
VPS4B-207ENST00000591519 NPIPB9F8W1W9 429 aa9.27□□□□□ -0.93
VPS4B-207ENST00000591519 TNFSF11O14788 317 aa9.27□□□□□ -0.93
VPS4B-207ENST00000591519 OPN1LWP04000 364 aa9.27□□□□□ -0.93
VPS4B-207ENST00000591519 G6PDP11413 515 aa9.27□□□□□ -0.93
VPS4B-207ENST00000591519 ME2P23368 584 aa9.27□□□□□ -0.93
VPS4B-207ENST00000591519 ELK4P28324 431 aa9.27□□□□□ -0.93
VPS4B-207ENST00000591519 AGTR1P30556 359 aa9.27□□□□□ -0.93
VPS4B-207ENST00000591519 HPCAL1P37235 193 aa9.27□□□□□ -0.93
VPS4B-207ENST00000591519 PTH2RP49190 550 aa9.27□□□□□ -0.93
VPS4B-207ENST00000591519 SUMO3P55854 103 aaPredicted RBP9.27□□□□□ -0.93
VPS4B-207ENST00000591519 POU6F2P78424 691 aaPredicted RBP9.27□□□□□ -0.93
VPS4B-207ENST00000591519 RNPS1Q15287 305 aaKnown RBP9.27□□□□□ -0.93
VPS4B-207ENST00000591519 PGS1Q32NB8 556 aa9.27□□□□□ -0.93
VPS4B-207ENST00000591519 CCNJQ5T5M9 372 aa9.27□□□□□ -0.93
VPS4B-207ENST00000591519 CDC73Q6P1J9 531 aa9.27□□□□□ -0.93
VPS4B-207ENST00000591519 ZNF704Q6ZNC4 412 aaPredicted RBP9.27□□□□□ -0.93
VPS4B-207ENST00000591519 GABRG1Q8N1C3 465 aa9.27□□□□□ -0.93
VPS4B-207ENST00000591519 Q8N3U1 123 aa9.27□□□□□ -0.93
VPS4B-207ENST00000591519 COX18Q8N8Q8 333 aa9.27□□□□□ -0.93
VPS4B-207ENST00000591519 GATSQ8NAP1 163 aa9.27□□□□□ -0.93
VPS4B-207ENST00000591519 LRRC8CQ8TDW0 803 aa9.27□□□□□ -0.93
VPS4B-207ENST00000591519 RNF128Q8TEB7 428 aa9.27□□□□□ -0.93
VPS4B-207ENST00000591519 OR5P2Q8WZ92 322 aa9.27□□□□□ -0.93
VPS4B-207ENST00000591519 CPNE4Q96A23 557 aaPredicted RBP9.27□□□□□ -0.93
VPS4B-207ENST00000591519 KLHL15Q96M94 604 aa9.27□□□□□ -0.93
VPS4B-207ENST00000591519 ACTR6Q9GZN1 396 aa9.27□□□□□ -0.93
VPS4B-207ENST00000591519 WDR55Q9H6Y2 383 aaPredicted RBP9.27□□□□□ -0.93
VPS4B-207ENST00000591519 TIGARQ9NQ88 270 aa9.27□□□□□ -0.93
VPS4B-207ENST00000591519 ZCCHC3Q9NUD5 404 aaKnown RBP9.27□□□□□ -0.93
VPS4B-207ENST00000591519 INTS9Q9NV88 658 aaKnown RBP9.27□□□□□ -0.93
VPS4B-207ENST00000591519 GPC6Q9Y625 555 aaPredicted RBP9.27□□□□□ -0.93
VPS4B-207ENST00000591519 CSPG4Q6UVK1 2322 aa9.27□□□□□ -0.93
VPS4B-207ENST00000591519 GJE1A6NN92 205 aa9.26□□□□□ -0.93
VPS4B-207ENST00000591519 C9JVG2 144 aa9.26□□□□□ -0.93
VPS4B-207ENST00000591519 ETV2O00321 342 aaPredicted RBP9.26□□□□□ -0.93
VPS4B-207ENST00000591519 SDHDO14521 159 aa9.26□□□□□ -0.93
VPS4B-207ENST00000591519 ZNF195O14628 629 aa9.26□□□□□ -0.93
VPS4B-207ENST00000591519 HS3ST1O14792 307 aa9.26□□□□□ -0.93
VPS4B-207ENST00000591519 SCAMP2O15127 329 aaKnown RBP9.26□□□□□ -0.93
VPS4B-207ENST00000591519 DNAJA2O60884 412 aa9.26□□□□□ -0.93
VPS4B-207ENST00000591519 GCM2O75603 506 aaPredicted RBP9.26□□□□□ -0.93
VPS4B-207ENST00000591519 SNUPNO95149 360 aaKnown RBP9.26□□□□□ -0.93
VPS4B-207ENST00000591519 CNOT4O95628 575 aaKnown RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms