RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 TRIB1Q96RU8 372 aa9.38□□□□□ -0.91
SDF2-208ENST00000589788 SDF2Q99470 211 aa9.38□□□□□ -0.91
SDF2-208ENST00000589788 PIGQQ9BRB3 760 aa9.38□□□□□ -0.91
SDF2-208ENST00000589788 INPP5KQ9BT40 448 aa9.38□□□□□ -0.91
SDF2-208ENST00000589788 PCNX3Q9H6A9 2034 aa9.38□□□□□ -0.91
SDF2-208ENST00000589788 COL12A1Q99715 3063 aa9.38□□□□□ -0.91
SDF2-208ENST00000589788 A0A087WZY1 265 aa9.37□□□□□ -0.91
SDF2-208ENST00000589788 A0A0G2JNJ9 132 aa9.37□□□□□ -0.91
SDF2-208ENST00000589788 FAM90A27PA6NNH2 459 aa9.37□□□□□ -0.91
SDF2-208ENST00000589788 HSPB2A8KAH6 182 aa9.37□□□□□ -0.91
SDF2-208ENST00000589788 B4DXG7 233 aa9.37□□□□□ -0.91
SDF2-208ENST00000589788 H3BML4 177 aa9.37□□□□□ -0.91
SDF2-208ENST00000589788 GTPBP1O00178 669 aaKnown RBP9.37□□□□□ -0.91
SDF2-208ENST00000589788 HCRTR2O43614 444 aa9.37□□□□□ -0.91
SDF2-208ENST00000589788 ALX3O95076 343 aa9.37□□□□□ -0.91
SDF2-208ENST00000589788 KRT75O95678 551 aa9.37□□□□□ -0.91
SDF2-208ENST00000589788 NUDT14O95848 222 aa9.37□□□□□ -0.91
SDF2-208ENST00000589788 OR12D1P0DN82 309 aa9.37□□□□□ -0.91
SDF2-208ENST00000589788 PEPDP12955 493 aa9.37□□□□□ -0.91
SDF2-208ENST00000589788 CDKN2CP42773 168 aa9.37□□□□□ -0.91
SDF2-208ENST00000589788 STARP49675 285 aa9.37□□□□□ -0.91
SDF2-208ENST00000589788 LHX2P50458 406 aa9.37□□□□□ -0.91
SDF2-208ENST00000589788 TXNL4AP83876 142 aaKnown RBP9.37□□□□□ -0.91
SDF2-208ENST00000589788 HPCAP84074 193 aa9.37□□□□□ -0.91
SDF2-208ENST00000589788 CDSNQ15517 529 aa9.37□□□□□ -0.91
SDF2-208ENST00000589788 GPR68Q15743 365 aa9.37□□□□□ -0.91
SDF2-208ENST00000589788 HSPB2Q16082 182 aa9.37□□□□□ -0.91
SDF2-208ENST00000589788 ARHGAP11BQ3KRB8 267 aa9.37□□□□□ -0.91
SDF2-208ENST00000589788 GLYR1Q49A26 553 aaPredicted RBP9.37□□□□□ -0.91
SDF2-208ENST00000589788 GPAT3Q53EU6 434 aa9.37□□□□□ -0.91
SDF2-208ENST00000589788 KLHL26Q53HC5 615 aa9.37□□□□□ -0.91
SDF2-208ENST00000589788 C6orf10Q5SRN2 563 aa9.37□□□□□ -0.91
SDF2-208ENST00000589788 NSUN5P2Q63ZY6 315 aa9.37□□□□□ -0.91
SDF2-208ENST00000589788 C6orf89Q6UWU4 347 aa9.37□□□□□ -0.91
SDF2-208ENST00000589788 ARSKQ6UWY0 536 aa9.37□□□□□ -0.91
SDF2-208ENST00000589788 MSANTD1Q6ZTZ1 278 aa9.37□□□□□ -0.91
SDF2-208ENST00000589788 CHMP1BQ7LBR1 199 aa9.37□□□□□ -0.91
SDF2-208ENST00000589788 RNF130Q86XS8 419 aa9.37□□□□□ -0.91
SDF2-208ENST00000589788 OR9I1Q8NGQ6 314 aa9.37□□□□□ -0.91
SDF2-208ENST00000589788 LILRB4Q8NHJ6 448 aa9.37□□□□□ -0.91
SDF2-208ENST00000589788 B4GALNT2Q8NHY0 566 aa9.37□□□□□ -0.91
SDF2-208ENST00000589788 ZPLD1Q8TCW7 415 aa9.37□□□□□ -0.91
SDF2-208ENST00000589788 RAB8BQ92930 207 aa9.37□□□□□ -0.91
SDF2-208ENST00000589788 VPS33AQ96AX1 596 aa9.37□□□□□ -0.91
SDF2-208ENST00000589788 CCDC106Q9BWC9 280 aa9.37□□□□□ -0.91
SDF2-208ENST00000589788 CALHM2Q9HA72 323 aa9.37□□□□□ -0.91
SDF2-208ENST00000589788 KCNJ16Q9NPI9 418 aa9.37□□□□□ -0.91
SDF2-208ENST00000589788 TMEM45AQ9NWC5 275 aa9.37□□□□□ -0.91
SDF2-208ENST00000589788 STOML1Q9UBI4 398 aa9.37□□□□□ -0.91
SDF2-208ENST00000589788 Q9UFV3 132 aa9.37□□□□□ -0.91
SDF2-208ENST00000589788 MKLN1Q9UL63 735 aa9.37□□□□□ -0.91
SDF2-208ENST00000589788 VDAC3Q9Y277 283 aa9.37□□□□□ -0.91
SDF2-208ENST00000589788 DTNAQ9Y4J8 743 aa9.37□□□□□ -0.91
SDF2-208ENST00000589788 OR2M5A3KFT3 312 aa9.36□□□□□ -0.91
SDF2-208ENST00000589788 CD8B2A6NJW9 211 aa9.36□□□□□ -0.91
SDF2-208ENST00000589788 CCT8L1PA6NM43 557 aa9.36□□□□□ -0.91
SDF2-208ENST00000589788 EBAG9O00559 213 aa9.36□□□□□ -0.91
SDF2-208ENST00000589788 COX6B1P14854 86 aa9.36□□□□□ -0.91
SDF2-208ENST00000589788 ZNF708P17019 499 aa9.36□□□□□ -0.91
SDF2-208ENST00000589788 TIMP3P35625 211 aa9.36□□□□□ -0.91
SDF2-208ENST00000589788 CLDN18P56856 261 aa9.36□□□□□ -0.91
SDF2-208ENST00000589788 EEFSECP57772 596 aaKnown RBP9.36□□□□□ -0.91
SDF2-208ENST00000589788 B3GALT5-AS1P59052 145 aa9.36□□□□□ -0.91
SDF2-208ENST00000589788 KLF10Q13118 480 aa9.36□□□□□ -0.91
SDF2-208ENST00000589788 CD226Q15762 336 aa9.36□□□□□ -0.91
SDF2-208ENST00000589788 BCL2A1Q16548 175 aa9.36□□□□□ -0.91
SDF2-208ENST00000589788 PDZK1Q5T2W1 519 aa9.36□□□□□ -0.91
SDF2-208ENST00000589788 ANKRD34AQ69YU3 496 aa9.36□□□□□ -0.91
SDF2-208ENST00000589788 HEPHL1Q6MZM0 1159 aa9.36□□□□□ -0.91
SDF2-208ENST00000589788 NLRC3Q7RTR2 1065 aa9.36□□□□□ -0.91
SDF2-208ENST00000589788 MRPL41Q8IXM3 137 aaKnown RBP9.36□□□□□ -0.91
SDF2-208ENST00000589788 UBQLNLQ8IYU4 475 aa9.36□□□□□ -0.91
SDF2-208ENST00000589788 TMCO5AQ8N6Q1 288 aa9.36□□□□□ -0.91
SDF2-208ENST00000589788 OR5M1Q8NGP8 315 aa9.36□□□□□ -0.91
SDF2-208ENST00000589788 PNPT1Q8TCS8 783 aaKnown RBP9.36□□□□□ -0.91
SDF2-208ENST00000589788 SMPDL3BQ92485 455 aa9.36□□□□□ -0.91
SDF2-208ENST00000589788 ROPN1LQ96C74 230 aa9.36□□□□□ -0.91
SDF2-208ENST00000589788 TUBA1CQ9BQE3 449 aa9.36□□□□□ -0.91
SDF2-208ENST00000589788 POLE3Q9NRF9 147 aa9.36□□□□□ -0.91
SDF2-208ENST00000589788 CCDC167Q9P0B6 97 aa9.36□□□□□ -0.91
SDF2-208ENST00000589788 ARMCX1Q9P291 453 aa9.36□□□□□ -0.91
SDF2-208ENST00000589788 CARD8Q9Y2G2 431 aa9.36□□□□□ -0.91
SDF2-208ENST00000589788 ZNF337Q9Y3M9 751 aa9.36□□□□□ -0.91
SDF2-208ENST00000589788 WDR45Q9Y484 360 aa9.36□□□□□ -0.91
SDF2-208ENST00000589788 CAPN7Q9Y6W3 813 aa9.36□□□□□ -0.91
SDF2-208ENST00000589788 NKX2-6A6NCS4 301 aa9.35□□□□□ -0.91
SDF2-208ENST00000589788 CLCA1A8K7I4 914 aa9.35□□□□□ -0.91
SDF2-208ENST00000589788 KDM4EB2RXH2 506 aaPredicted RBP9.35□□□□□ -0.91
SDF2-208ENST00000589788 NPIPB9F8W1W9 429 aa9.35□□□□□ -0.91
SDF2-208ENST00000589788 HMGN4O00479 90 aa9.35□□□□□ -0.91
SDF2-208ENST00000589788 NR5A2O00482 541 aa9.35□□□□□ -0.91
SDF2-208ENST00000589788 DVL2O14641 736 aa9.35□□□□□ -0.91
SDF2-208ENST00000589788 SEC14L5O43304 696 aa9.35□□□□□ -0.91
SDF2-208ENST00000589788 HNRNPRO43390 633 aaKnown RBP9.35□□□□□ -0.91
SDF2-208ENST00000589788 FCMRO60667 390 aa9.35□□□□□ -0.91
SDF2-208ENST00000589788 SNRPB2P08579 225 aaKnown RBP9.35□□□□□ -0.91
SDF2-208ENST00000589788 ZCCHC18P0CG32 403 aa9.35□□□□□ -0.91
SDF2-208ENST00000589788 UBL4AP11441 157 aa9.35□□□□□ -0.91
SDF2-208ENST00000589788 ZNF17P17021 662 aa9.35□□□□□ -0.91
SDF2-208ENST00000589788 MAGEA8P43361 318 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms